RNA–Protein interactions for RNA: ENST00000515824.1

LMNA-225, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-225ENST00000515824 RASEFQ8IZ41 740 aa22.57■■□□□ 1.2
LMNA-225ENST00000515824 PTPDC1A2A3K4 754 aa22.56■■□□□ 1.2
LMNA-225ENST00000515824 NFIBO00712 420 aa22.56■■□□□ 1.2
LMNA-225ENST00000515824 DDAH1O94760 285 aa22.56■■□□□ 1.2
LMNA-225ENST00000515824 SNAI1O95863 264 aaPredicted RBP22.56■■□□□ 1.2
LMNA-225ENST00000515824 LIFRP42702 1097 aa22.56■■□□□ 1.2
LMNA-225ENST00000515824 BAATQ14032 418 aaPredicted RBP22.56■■□□□ 1.2
LMNA-225ENST00000515824 QRICH1Q2TAL8 776 aa22.56■■□□□ 1.2
LMNA-225ENST00000515824 FBXO11Q86XK2 927 aa22.56■■□□□ 1.2
LMNA-225ENST00000515824 ZNF654Q8IZM8 581 aa22.56■■□□□ 1.2
LMNA-225ENST00000515824 CLEC4DQ8WXI8 215 aa22.56■■□□□ 1.2
LMNA-225ENST00000515824 FGD4Q96M96 766 aa22.56■■□□□ 1.2
LMNA-225ENST00000515824 MAP3K14Q99558 947 aa22.56■■□□□ 1.2
LMNA-225ENST00000515824 GPHNQ9NQX3 736 aaPredicted RBP22.56■■□□□ 1.2
LMNA-225ENST00000515824 SOWAHBA6NEL2 793 aa22.55■■□□□ 1.2
LMNA-225ENST00000515824 ASB14A6NK59 587 aa22.55■■□□□ 1.2
LMNA-225ENST00000515824 EPB41L2O43491 1005 aaKnown RBP22.55■■□□□ 1.2
LMNA-225ENST00000515824 HMGB1P09429 215 aaKnown RBP22.55■■□□□ 1.2
LMNA-225ENST00000515824 ZNF865P0CJ78 1059 aaPredicted RBP22.55■■□□□ 1.2
LMNA-225ENST00000515824 KIF5BP33176 963 aa22.55■■□□□ 1.2
LMNA-225ENST00000515824 HSPA4P34932 840 aa22.55■■□□□ 1.2
LMNA-225ENST00000515824 RNF207Q6ZRF8 634 aa22.55■■□□□ 1.2
LMNA-225ENST00000515824 ARMCX2Q7L311 632 aa22.55■■□□□ 1.2
LMNA-225ENST00000515824 DHX32Q7L7V1 743 aaKnown RBP22.55■■□□□ 1.2
LMNA-225ENST00000515824 CTCFLQ8NI51 663 aaPredicted RBP22.55■■□□□ 1.2
LMNA-225ENST00000515824 ABHD16BQ9H3Z7 469 aa22.55■■□□□ 1.2
LMNA-225ENST00000515824 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.55■■□□□ 1.2
LMNA-225ENST00000515824 ADD3Q9UEY8 706 aaKnown RBP22.55■■□□□ 1.2
LMNA-225ENST00000515824 TNRC18O15417 2968 aaPredicted RBP22.55■■□□□ 1.2
LMNA-225ENST00000515824 ABCB11O95342 1321 aa22.55■■□□□ 1.2
LMNA-225ENST00000515824 AKR1A1P14550 325 aa22.54■■□□□ 1.2
LMNA-225ENST00000515824 MNX1P50219 401 aaPredicted RBP22.54■■□□□ 1.2
LMNA-225ENST00000515824 COL9A3Q14050 684 aaPredicted RBP22.54■■□□□ 1.2
LMNA-225ENST00000515824 ADCK5Q3MIX3 580 aa22.54■■□□□ 1.2
LMNA-225ENST00000515824 ANO1Q5XXA6 986 aa22.54■■□□□ 1.2
LMNA-225ENST00000515824 CCDC144CPQ8IYA2 1237 aa22.54■■□□□ 1.2
LMNA-225ENST00000515824 ARRDC4Q8NCT1 418 aa22.54■■□□□ 1.2
LMNA-225ENST00000515824 RGS22Q8NE09 1264 aa22.54■■□□□ 1.2
LMNA-225ENST00000515824 DIS3LQ8TF46 1054 aaKnown RBP22.54■■□□□ 1.2
LMNA-225ENST00000515824 DPF3Q92784 378 aa22.54■■□□□ 1.2
LMNA-225ENST00000515824 KCNB2Q92953 911 aa22.54■■□□□ 1.2
LMNA-225ENST00000515824 AMNQ9BXJ7 453 aa22.54■■□□□ 1.2
LMNA-225ENST00000515824 LRRC2Q9BYS8 371 aa22.54■■□□□ 1.2
LMNA-225ENST00000515824 MAF1Q9H063 256 aa22.54■■□□□ 1.2
LMNA-225ENST00000515824 RIOX1Q9H6W3 641 aa22.54■■□□□ 1.2
LMNA-225ENST00000515824 ZHX1Q9UKY1 873 aaPredicted RBP22.54■■□□□ 1.2
LMNA-225ENST00000515824 MRPL11Q9Y3B7 192 aaKnown RBP22.54■■□□□ 1.2
LMNA-225ENST00000515824 SLC12A7Q9Y666 1083 aa22.54■■□□□ 1.2
LMNA-225ENST00000515824 PLXNA1Q9UIW2 1896 aa22.54■■□□□ 1.2
LMNA-225ENST00000515824 ZBTB5O15062 677 aa22.53■■□□□ 1.2
LMNA-225ENST00000515824 CALM1P0DP23 149 aa22.53■■□□□ 1.2
LMNA-225ENST00000515824 CALM2P0DP24 149 aa22.53■■□□□ 1.2
LMNA-225ENST00000515824 CALM3P0DP25 149 aa22.53■■□□□ 1.2
LMNA-225ENST00000515824 RARBP10826 455 aa22.53■■□□□ 1.2
LMNA-225ENST00000515824 CALML3P27482 149 aa22.53■■□□□ 1.2
LMNA-225ENST00000515824 EXOSC10Q01780 885 aaKnown RBP22.53■■□□□ 1.2
LMNA-225ENST00000515824 TRAF1Q13077 416 aa22.53■■□□□ 1.2
LMNA-225ENST00000515824 ACVR2BQ13705 512 aa22.53■■□□□ 1.2
LMNA-225ENST00000515824 SYNE3Q6ZMZ3 975 aa22.53■■□□□ 1.2
LMNA-225ENST00000515824 MTMR8Q96EF0 704 aa22.53■■□□□ 1.2
LMNA-225ENST00000515824 C11orf49Q9H6J7 331 aa22.53■■□□□ 1.2
LMNA-225ENST00000515824 FAM184BQ9ULE4 1060 aa22.53■■□□□ 1.2
LMNA-225ENST00000515824 PDE4DIPQ5VU43 2346 aa22.52■■□□□ 1.2
LMNA-225ENST00000515824 GNAQP50148 359 aa22.52■■□□□ 1.2
LMNA-225ENST00000515824 RPS6P62753 249 aaKnown RBP22.52■■□□□ 1.2
LMNA-225ENST00000515824 SGMS1Q86VZ5 419 aa22.52■■□□□ 1.2
LMNA-225ENST00000515824 MCF2L2Q86YR7 1114 aa22.52■■□□□ 1.2
LMNA-225ENST00000515824 LZTS2Q9BRK4 669 aa22.52■■□□□ 1.2
LMNA-225ENST00000515824 MYL10Q9BUA6 226 aa22.52■■□□□ 1.2
LMNA-225ENST00000515824 DNM1LO00429 736 aa22.51■■□□□ 1.19
LMNA-225ENST00000515824 SMARCA1P28370 1054 aa22.51■■□□□ 1.19
LMNA-225ENST00000515824 HOMER1Q86YM7 354 aa22.51■■□□□ 1.19
LMNA-225ENST00000515824 PURBQ96QR8 312 aaKnown RBP22.51■■□□□ 1.19
LMNA-225ENST00000515824 SNX14Q9Y5W7 946 aa22.51■■□□□ 1.19
LMNA-225ENST00000515824 SMCHD1A6NHR9 2005 aa22.5■■□□□ 1.19
LMNA-225ENST00000515824 LOC102724159A0A0B4J2E5 919 aa22.5■■□□□ 1.19
LMNA-225ENST00000515824 CYTH3O43739 400 aa22.5■■□□□ 1.19
LMNA-225ENST00000515824 PWP2Q15269 919 aaKnown RBP22.5■■□□□ 1.19
LMNA-225ENST00000515824 SLC30A10Q6XR72 485 aa22.5■■□□□ 1.19
LMNA-225ENST00000515824 JAKMIP1Q96N16 626 aaKnown RBP22.5■■□□□ 1.19
LMNA-225ENST00000515824 PIGSQ96S52 555 aa22.5■■□□□ 1.19
LMNA-225ENST00000515824 MPHOSPH6Q99547 160 aaKnown RBP22.5■■□□□ 1.19
LMNA-225ENST00000515824 XPNPEP3Q9NQH7 507 aa22.5■■□□□ 1.19
LMNA-225ENST00000515824 PNMA6FA0A0J9YX94 578 aa22.49■■□□□ 1.19
LMNA-225ENST00000515824 MYCNP04198 464 aaPredicted RBP22.49■■□□□ 1.19
LMNA-225ENST00000515824 PSMA5P28066 241 aa22.49■■□□□ 1.19
LMNA-225ENST00000515824 FGD1P98174 961 aa22.49■■□□□ 1.19
LMNA-225ENST00000515824 GJC2Q5T442 439 aaPredicted RBP22.49■■□□□ 1.19
LMNA-225ENST00000515824 PRPF38BQ5VTL8 546 aaKnown RBP22.49■■□□□ 1.19
LMNA-225ENST00000515824 DNERQ8NFT8 737 aa22.49■■□□□ 1.19
LMNA-225ENST00000515824 TCEANC2Q96MN5 208 aa22.49■■□□□ 1.19
LMNA-225ENST00000515824 PCDHA1Q9Y5I3 950 aa22.49■■□□□ 1.19
LMNA-225ENST00000515824 ASTN1O14525 1302 aa22.49■■□□□ 1.19
LMNA-225ENST00000515824 B4DLN1 442 aa22.48■■□□□ 1.19
LMNA-225ENST00000515824 KBTBD13C9JR72 458 aa22.48■■□□□ 1.19
LMNA-225ENST00000515824 COL6A1P12109 1028 aa22.48■■□□□ 1.19
LMNA-225ENST00000515824 RXRAP19793 462 aa22.48■■□□□ 1.19
LMNA-225ENST00000515824 ALDH5A1P51649 535 aaPredicted RBP22.48■■□□□ 1.19
LMNA-225ENST00000515824 MRPL12P52815 198 aaKnown RBP22.48■■□□□ 1.19
LMNA-225ENST00000515824 SLC35G1Q2M3R5 365 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms