RNA–Protein interactions for RNA: ENST00000515736.2

SFXN1-211, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-211ENST00000515736 TM4SF1P30408 202 aa9.75□□□□□ -0.85
SFXN1-211ENST00000515736 CASP7P55210 303 aa9.75□□□□□ -0.85
SFXN1-211ENST00000515736 RASSF7Q02833 373 aa9.75□□□□□ -0.85
SFXN1-211ENST00000515736 SPEM2Q0P670 501 aa9.75□□□□□ -0.85
SFXN1-211ENST00000515736 CUL4AQ13619 759 aa9.75□□□□□ -0.85
SFXN1-211ENST00000515736 RASA3Q14644 834 aa9.75□□□□□ -0.85
SFXN1-211ENST00000515736 NFIXQ14938 502 aa9.75□□□□□ -0.85
SFXN1-211ENST00000515736 RPS26P11Q5JNZ5 115 aaPredicted RBP9.75□□□□□ -0.85
SFXN1-211ENST00000515736 L1TD1Q5T7N2 865 aaKnown RBP9.75□□□□□ -0.85
SFXN1-211ENST00000515736 DHX32Q7L7V1 743 aaKnown RBP9.75□□□□□ -0.85
SFXN1-211ENST00000515736 AACSQ86V21 672 aa9.75□□□□□ -0.85
SFXN1-211ENST00000515736 TRIM42Q8IWZ5 723 aa9.75□□□□□ -0.85
SFXN1-211ENST00000515736 RNPC3Q96LT9 517 aaKnown RBP9.75□□□□□ -0.85
SFXN1-211ENST00000515736 ZFP42Q96MM3 310 aa9.75□□□□□ -0.85
SFXN1-211ENST00000515736 TM6SF1Q9BZW5 370 aa9.75□□□□□ -0.85
SFXN1-211ENST00000515736 ZNF576Q9H609 170 aa9.75□□□□□ -0.85
SFXN1-211ENST00000515736 SNTG2Q9NY99 539 aa9.75□□□□□ -0.85
SFXN1-211ENST00000515736 MARK1Q9P0L2 795 aa9.75□□□□□ -0.85
SFXN1-211ENST00000515736 NARFQ9UHQ1 456 aa9.75□□□□□ -0.85
SFXN1-211ENST00000515736 ZBTB1Q9Y2K1 713 aa9.75□□□□□ -0.85
SFXN1-211ENST00000515736 NRXN2Q9P2S2 1712 aa9.75□□□□□ -0.85
SFXN1-211ENST00000515736 ABCC12Q96J65 1359 aa9.75□□□□□ -0.85
SFXN1-211ENST00000515736 A0A087WZG4 1122 aa9.74□□□□□ -0.85
SFXN1-211ENST00000515736 SASH1O94885 1247 aa9.74□□□□□ -0.85
SFXN1-211ENST00000515736 SERPINB2P05120 415 aa9.74□□□□□ -0.85
SFXN1-211ENST00000515736 ATP5JP18859 108 aa9.74□□□□□ -0.85
SFXN1-211ENST00000515736 HTRA3P83110 453 aa9.74□□□□□ -0.85
SFXN1-211ENST00000515736 FAAP100Q0VG06 881 aa9.74□□□□□ -0.85
SFXN1-211ENST00000515736 FSTL1Q12841 308 aa9.74□□□□□ -0.85
SFXN1-211ENST00000515736 C2CD5Q86YS7 1000 aa9.74□□□□□ -0.85
SFXN1-211ENST00000515736 KCNB2Q92953 911 aa9.74□□□□□ -0.85
SFXN1-211ENST00000515736 NSUN5Q96P11 429 aaKnown RBP9.74□□□□□ -0.85
SFXN1-211ENST00000515736 DEPDC7Q96QD5 511 aa9.74□□□□□ -0.85
SFXN1-211ENST00000515736 SLC30A3Q99726 388 aa9.74□□□□□ -0.85
SFXN1-211ENST00000515736 PLA2G12BQ9BX93 195 aa9.74□□□□□ -0.85
SFXN1-211ENST00000515736 LRRC3Q9BY71 257 aa9.74□□□□□ -0.85
SFXN1-211ENST00000515736 NDFIP2Q9NV92 336 aa9.74□□□□□ -0.85
SFXN1-211ENST00000515736 ARAP2Q8WZ64 1704 aa9.73□□□□□ -0.85
SFXN1-211ENST00000515736 ANKRD31Q8N7Z5 1873 aa9.73□□□□□ -0.85
SFXN1-211ENST00000515736 H0YIN7 160 aa9.73□□□□□ -0.85
SFXN1-211ENST00000515736 IL15P40933 162 aaPredicted RBP9.73□□□□□ -0.85
SFXN1-211ENST00000515736 RFX5P48382 616 aaPredicted RBP9.73□□□□□ -0.85
SFXN1-211ENST00000515736 NEK4P51957 841 aa9.73□□□□□ -0.85
SFXN1-211ENST00000515736 NRLP54845 237 aa9.73□□□□□ -0.85
SFXN1-211ENST00000515736 SEZ6Q53EL9 994 aa9.73□□□□□ -0.85
SFXN1-211ENST00000515736 KIF6Q6ZMV9 814 aa9.73□□□□□ -0.85
SFXN1-211ENST00000515736 CCDC81Q6ZN84 652 aa9.73□□□□□ -0.85
SFXN1-211ENST00000515736 RIPOR1Q6ZS17 1223 aa9.73□□□□□ -0.85
SFXN1-211ENST00000515736 UBE3BQ7Z3V4 1068 aa9.73□□□□□ -0.85
SFXN1-211ENST00000515736 DNAJC5GQ8N7S2 189 aa9.73□□□□□ -0.85
SFXN1-211ENST00000515736 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.73□□□□□ -0.85
SFXN1-211ENST00000515736 TNPO1Q92973 898 aaKnown RBP9.73□□□□□ -0.85
SFXN1-211ENST00000515736 BHMTQ93088 406 aa9.73□□□□□ -0.85
SFXN1-211ENST00000515736 ISCA1Q9BUE6 129 aa9.73□□□□□ -0.85
SFXN1-211ENST00000515736 LSG1Q9H089 658 aaKnown RBP9.73□□□□□ -0.85
SFXN1-211ENST00000515736 NUCKS1Q9H1E3 243 aaKnown RBP9.73□□□□□ -0.85
SFXN1-211ENST00000515736 HMG20BQ9P0W2 317 aa9.73□□□□□ -0.85
SFXN1-211ENST00000515736 PPT2Q9UMR5 302 aa9.73□□□□□ -0.85
SFXN1-211ENST00000515736 R3HCC1Q9Y3T6 440 aaKnown RBP9.73□□□□□ -0.85
SFXN1-211ENST00000515736 CDHR2Q9BYE9 1310 aa9.73□□□□□ -0.85
SFXN1-211ENST00000515736 SCN7AQ01118 1682 aa9.73□□□□□ -0.85
SFXN1-211ENST00000515736 FAM221BA6H8Z2 402 aa9.72□□□□□ -0.85
SFXN1-211ENST00000515736 SMAD7O15105 426 aaKnown RBP9.72□□□□□ -0.85
SFXN1-211ENST00000515736 NPHP1O15259 732 aa9.72□□□□□ -0.85
SFXN1-211ENST00000515736 BNIP3LO60238 219 aa9.72□□□□□ -0.85
SFXN1-211ENST00000515736 ZKSCAN1P17029 563 aaPredicted RBP9.72□□□□□ -0.85
SFXN1-211ENST00000515736 LMNB1P20700 586 aa9.72□□□□□ -0.85
SFXN1-211ENST00000515736 TCIRG1Q13488 830 aa9.72□□□□□ -0.85
SFXN1-211ENST00000515736 PTPROQ16827 1216 aa9.72□□□□□ -0.85
SFXN1-211ENST00000515736 LRRFIP1Q32MZ4 808 aaKnown RBP9.72□□□□□ -0.85
SFXN1-211ENST00000515736 TSHZ3Q63HK5 1081 aa9.72□□□□□ -0.85
SFXN1-211ENST00000515736 BNC2Q6ZN30 1099 aaPredicted RBP9.72□□□□□ -0.85
SFXN1-211ENST00000515736 CCDC84Q86UT8 332 aaPredicted RBP9.72□□□□□ -0.85
SFXN1-211ENST00000515736 TTLL6Q8N841 843 aa9.72□□□□□ -0.85
SFXN1-211ENST00000515736 SMC1BQ8NDV3 1235 aa9.72□□□□□ -0.85
SFXN1-211ENST00000515736 EAF2Q96CJ1 260 aaPredicted RBP9.72□□□□□ -0.85
SFXN1-211ENST00000515736 PA2G4Q9UQ80 394 aaKnown RBP9.72□□□□□ -0.85
SFXN1-211ENST00000515736 BCORQ6W2J9 1755 aa9.72□□□□□ -0.85
SFXN1-211ENST00000515736 DICER1Q9UPY3 1922 aaKnown RBP9.72□□□□□ -0.85
SFXN1-211ENST00000515736 COL11A2P13942 1736 aaPredicted RBP9.71□□□□□ -0.85
SFXN1-211ENST00000515736 ERVV-1B6SEH8 477 aa9.71□□□□□ -0.86
SFXN1-211ENST00000515736 PDE2AO00408 941 aaPredicted RBP9.71□□□□□ -0.86
SFXN1-211ENST00000515736 F13A1P00488 732 aa9.71□□□□□ -0.86
SFXN1-211ENST00000515736 PCCAP05165 728 aaPredicted RBP9.71□□□□□ -0.86
SFXN1-211ENST00000515736 PSMA5P28066 241 aa9.71□□□□□ -0.86
SFXN1-211ENST00000515736 SMCPP49901 116 aaPredicted RBP9.71□□□□□ -0.86
SFXN1-211ENST00000515736 FOXO4P98177 505 aa9.71□□□□□ -0.86
SFXN1-211ENST00000515736 MMRN1Q13201 1228 aa9.71□□□□□ -0.86
SFXN1-211ENST00000515736 TNNI3KQ59H18 835 aa9.71□□□□□ -0.86
SFXN1-211ENST00000515736 RAB44Q7Z6P3 723 aaPredicted RBP9.71□□□□□ -0.86
SFXN1-211ENST00000515736 FBXO27Q8NI29 283 aa9.71□□□□□ -0.86
SFXN1-211ENST00000515736 ASAP3Q8TDY4 903 aa9.71□□□□□ -0.86
SFXN1-211ENST00000515736 ZNF622Q969S3 477 aaKnown RBP eCLIP9.71□□□□□ -0.86
SFXN1-211ENST00000515736 TMX3Q96JJ7 454 aa9.71□□□□□ -0.86
SFXN1-211ENST00000515736 ZSCAN31Q96LW9 406 aaPredicted RBP9.71□□□□□ -0.86
SFXN1-211ENST00000515736 GPN3Q9UHW5 284 aaPredicted RBP9.71□□□□□ -0.86
SFXN1-211ENST00000515736 FPGT-TNNI3KV9GXZ4 949 aa9.71□□□□□ -0.86
SFXN1-211ENST00000515736 CCDC171Q6TFL3 1326 aa9.71□□□□□ -0.86
SFXN1-211ENST00000515736 CARMIL3Q8ND23 1372 aa9.71□□□□□ -0.86
SFXN1-211ENST00000515736 MED23Q9ULK4 1368 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms