RNA–Protein interactions for RNA: ENST00000515417.5

RACK1-234, Transcript of receptor for activated C kinase 1, humanhuman

TSL 3

Gene RACK1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-234ENST00000515417 ANO1Q5XXA6 986 aa11.32□□□□□ -0.6
RACK1-234ENST00000515417 MICU3Q86XE3 530 aa11.32□□□□□ -0.6
RACK1-234ENST00000515417 HOMER1Q86YM7 354 aa11.32□□□□□ -0.6
RACK1-234ENST00000515417 TRMT44Q8IYL2 757 aaKnown RBP11.32□□□□□ -0.6
RACK1-234ENST00000515417 CMTR1Q8N1G2 835 aaKnown RBP11.32□□□□□ -0.6
RACK1-234ENST00000515417 U2AF1L4Q8WU68 220 aaKnown RBP11.32□□□□□ -0.6
RACK1-234ENST00000515417 TMEM87BQ96K49 555 aa11.32□□□□□ -0.6
RACK1-234ENST00000515417 PAK6Q9NQU5 681 aaPredicted RBP11.32□□□□□ -0.6
RACK1-234ENST00000515417 FBXO40Q9UH90 709 aa11.32□□□□□ -0.6
RACK1-234ENST00000515417 ZNF236Q9UL36 1845 aa11.32□□□□□ -0.6
RACK1-234ENST00000515417 DNAJC25-GNG10A0A024R161 153 aa11.31□□□□□ -0.6
RACK1-234ENST00000515417 POTEB2H3BUK9 544 aa11.31□□□□□ -0.6
RACK1-234ENST00000515417 PPP1R11O60927 126 aaPredicted RBP11.31□□□□□ -0.6
RACK1-234ENST00000515417 SEC24BO95487 1268 aa11.31□□□□□ -0.6
RACK1-234ENST00000515417 IGHA2P01877 340 aa11.31□□□□□ -0.6
RACK1-234ENST00000515417 GJB1P08034 283 aa11.31□□□□□ -0.6
RACK1-234ENST00000515417 CYBAP13498 195 aa11.31□□□□□ -0.6
RACK1-234ENST00000515417 CASTP20810 708 aaKnown RBP11.31□□□□□ -0.6
RACK1-234ENST00000515417 CNGA1P29973 690 aa11.31□□□□□ -0.6
RACK1-234ENST00000515417 GJA8P48165 433 aa11.31□□□□□ -0.6
RACK1-234ENST00000515417 KRT32Q14532 448 aa11.31□□□□□ -0.6
RACK1-234ENST00000515417 TKFCQ3LXA3 575 aa11.31□□□□□ -0.6
RACK1-234ENST00000515417 OLFML2BQ68BL8 750 aa11.31□□□□□ -0.6
RACK1-234ENST00000515417 SLC30A10Q6XR72 485 aa11.31□□□□□ -0.6
RACK1-234ENST00000515417 DHX32Q7L7V1 743 aaKnown RBP11.31□□□□□ -0.6
RACK1-234ENST00000515417 CLEC4DQ8WXI8 215 aa11.31□□□□□ -0.6
RACK1-234ENST00000515417 LENG1Q96BZ8 264 aaPredicted RBP11.31□□□□□ -0.6
RACK1-234ENST00000515417 PIGSQ96S52 555 aa11.31□□□□□ -0.6
RACK1-234ENST00000515417 HMX1Q9NP08 348 aaPredicted RBP11.31□□□□□ -0.6
RACK1-234ENST00000515417 SLC5A4Q9NY91 659 aa11.31□□□□□ -0.6
RACK1-234ENST00000515417 BRPF3Q9ULD4 1205 aa11.31□□□□□ -0.6
RACK1-234ENST00000515417 NAP1L2Q9ULW6 460 aaPredicted RBP11.31□□□□□ -0.6
RACK1-234ENST00000515417 ASTN1O14525 1302 aa11.31□□□□□ -0.6
RACK1-234ENST00000515417 RPTORQ8N122 1335 aa11.31□□□□□ -0.6
RACK1-234ENST00000515417 SMCHD1A6NHR9 2005 aa11.3□□□□□ -0.6
RACK1-234ENST00000515417 hCG_1642624A0A1W2PR95 340 aa11.3□□□□□ -0.6
RACK1-234ENST00000515417 PTPDC1A2A3K4 754 aa11.3□□□□□ -0.6
RACK1-234ENST00000515417 CYTH3O43739 400 aa11.3□□□□□ -0.6
RACK1-234ENST00000515417 DDAH1O94760 285 aa11.3□□□□□ -0.6
RACK1-234ENST00000515417 TFRCP02786 760 aaKnown RBP11.3□□□□□ -0.6
RACK1-234ENST00000515417 FGD1P98174 961 aa11.3□□□□□ -0.6
RACK1-234ENST00000515417 BAATQ14032 418 aaPredicted RBP11.3□□□□□ -0.6
RACK1-234ENST00000515417 BLOC1S2Q6QNY1 142 aa11.3□□□□□ -0.6
RACK1-234ENST00000515417 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.3□□□□□ -0.67e-29■□□□□ 9
RACK1-234ENST00000515417 SLC17A8Q8NDX2 589 aa11.3□□□□□ -0.6
RACK1-234ENST00000515417 DIS3LQ8TF46 1054 aaKnown RBP11.3□□□□□ -0.6
RACK1-234ENST00000515417 TBC1D5Q92609 795 aa11.3□□□□□ -0.6
RACK1-234ENST00000515417 TINF2Q9BSI4 451 aa11.3□□□□□ -0.6
RACK1-234ENST00000515417 CYP39A1Q9NYL5 469 aa11.3□□□□□ -0.6
RACK1-234ENST00000515417 SLC12A7Q9Y666 1083 aa11.3□□□□□ -0.6
RACK1-234ENST00000515417 WDR19Q8NEZ3 1342 aa11.3□□□□□ -0.6
RACK1-234ENST00000515417 BAZ2BQ9UIF8 2168 aaKnown RBP11.3□□□□□ -0.6
RACK1-234ENST00000515417 KLF18A0A0U1RQI7 1052 aa11.29□□□□□ -0.6
RACK1-234ENST00000515417 SOWAHBA6NEL2 793 aa11.29□□□□□ -0.6
RACK1-234ENST00000515417 SGPL1O95470 568 aa11.29□□□□□ -0.6
RACK1-234ENST00000515417 RPS6KB1P23443 525 aa11.29□□□□□ -0.6
RACK1-234ENST00000515417 CALML3P27482 149 aa11.29□□□□□ -0.6
RACK1-234ENST00000515417 LIFRP42702 1097 aa11.29□□□□□ -0.6
RACK1-234ENST00000515417 APOBRQ0VD83 1088 aa11.29□□□□□ -0.6
RACK1-234ENST00000515417 APOA5Q6Q788 366 aa11.29□□□□□ -0.6
RACK1-234ENST00000515417 Q6ZUG5 572 aa11.29□□□□□ -0.6
RACK1-234ENST00000515417 FBXO11Q86XK2 927 aa11.29□□□□□ -0.6
RACK1-234ENST00000515417 CCDC82Q8N4S0 544 aa11.29□□□□□ -0.6
RACK1-234ENST00000515417 SRBD1Q8N5C6 995 aaKnown RBP11.29□□□□□ -0.6
RACK1-234ENST00000515417 FAM133AQ8N9E0 248 aa11.29□□□□□ -0.6
RACK1-234ENST00000515417 CTCFLQ8NI51 663 aaPredicted RBP11.29□□□□□ -0.6
RACK1-234ENST00000515417 BRF1Q92994 677 aa11.29□□□□□ -0.6
RACK1-234ENST00000515417 MTMR8Q96EF0 704 aa11.29□□□□□ -0.6
RACK1-234ENST00000515417 LARP6Q9BRS8 491 aaKnown RBP11.29□□□□□ -0.6
RACK1-234ENST00000515417 MTA3Q9BTC8 594 aa11.29□□□□□ -0.6
RACK1-234ENST00000515417 UPF3BQ9BZI7 483 aaKnown RBP11.29□□□□□ -0.6
RACK1-234ENST00000515417 ZHX1Q9UKY1 873 aaPredicted RBP11.29□□□□□ -0.6
RACK1-234ENST00000515417 GOLGA8AA7E2F4 631 aa11.28□□□□□ -0.6
RACK1-234ENST00000515417 GOLGA8BA8MQT2 603 aa11.28□□□□□ -0.6
RACK1-234ENST00000515417 ZBTB5O15062 677 aa11.28□□□□□ -0.6
RACK1-234ENST00000515417 FARP2O94887 1054 aaPredicted RBP11.28□□□□□ -0.6
RACK1-234ENST00000515417 SNAI1O95863 264 aaPredicted RBP11.28□□□□□ -0.6
RACK1-234ENST00000515417 KIF5BP33176 963 aa11.28□□□□□ -0.6
RACK1-234ENST00000515417 LHX8Q68G74 356 aa11.28□□□□□ -0.6
RACK1-234ENST00000515417 Q7L0L9 218 aa11.28□□□□□ -0.6
RACK1-234ENST00000515417 ARMCX2Q7L311 632 aa11.28□□□□□ -0.6
RACK1-234ENST00000515417 SGMS1Q86VZ5 419 aa11.28□□□□□ -0.6
RACK1-234ENST00000515417 TMTC2Q8N394 836 aa11.28□□□□□ -0.6
RACK1-234ENST00000515417 RIOX1Q9H6W3 641 aa11.28□□□□□ -0.6
RACK1-234ENST00000515417 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.28□□□□□ -0.6
RACK1-234ENST00000515417 DIS3Q9Y2L1 958 aaKnown RBP11.28□□□□□ -0.6
RACK1-234ENST00000515417 PFASO15067 1338 aa11.28□□□□□ -0.6
RACK1-234ENST00000515417 ALPK3Q96L96 1907 aa11.27□□□□□ -0.6
RACK1-234ENST00000515417 OPLAHO14841 1288 aa11.27□□□□□ -0.61
RACK1-234ENST00000515417 ZBTB43O43298 467 aa11.27□□□□□ -0.61
RACK1-234ENST00000515417 PPFIA3O75145 1194 aa11.27□□□□□ -0.61
RACK1-234ENST00000515417 MYCNP04198 464 aaPredicted RBP11.27□□□□□ -0.61
RACK1-234ENST00000515417 HMGB1P09429 215 aaKnown RBP11.27□□□□□ -0.61
RACK1-234ENST00000515417 ZNF865P0CJ78 1059 aaPredicted RBP11.27□□□□□ -0.61
RACK1-234ENST00000515417 PTGS1P23219 599 aa11.27□□□□□ -0.61
RACK1-234ENST00000515417 PSMA5P28066 241 aa11.27□□□□□ -0.61
RACK1-234ENST00000515417 RPS6P62753 249 aaKnown RBP11.27□□□□□ -0.61
RACK1-234ENST00000515417 RTN1Q16799 776 aa11.27□□□□□ -0.61
RACK1-234ENST00000515417 C8orf34Q49A92 452 aa11.27□□□□□ -0.61
RACK1-234ENST00000515417 SYNE3Q6ZMZ3 975 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms