RNA–Protein interactions for RNA: ENST00000515316.5

SPOCK3-224, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 4

Gene SPOCK3, Length 524 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-224ENST00000515316 NEK4P51957 841 aa29.3■■■□□ 2.28
SPOCK3-224ENST00000515316 SLC35G1Q2M3R5 365 aa29.3■■■□□ 2.28
SPOCK3-224ENST00000515316 HOMER1Q86YM7 354 aa29.3■■■□□ 2.28
SPOCK3-224ENST00000515316 ZNF274Q96GC6 653 aaPredicted RBP29.3■■■□□ 2.28
SPOCK3-224ENST00000515316 BIN2Q9UBW5 565 aaPredicted RBP29.3■■■□□ 2.28
SPOCK3-224ENST00000515316 COBLO75128 1261 aa29.29■■■□□ 2.28
SPOCK3-224ENST00000515316 PDIA3P30101 505 aaKnown RBP29.29■■■□□ 2.28
SPOCK3-224ENST00000515316 USH1GQ495M9 461 aa29.29■■■□□ 2.28
SPOCK3-224ENST00000515316 SEC63Q9UGP8 760 aaKnown RBP29.29■■■□□ 2.28
SPOCK3-224ENST00000515316 DIS3Q9Y2L1 958 aaKnown RBP29.29■■■□□ 2.28
SPOCK3-224ENST00000515316 MRPL11Q9Y3B7 192 aaKnown RBP29.29■■■□□ 2.28
SPOCK3-224ENST00000515316 PFASO15067 1338 aa29.28■■■□□ 2.28
SPOCK3-224ENST00000515316 MUM1L1Q5H9M0 696 aa29.28■■■□□ 2.28
SPOCK3-224ENST00000515316 ARMC5Q96C12 935 aa29.28■■■□□ 2.28
SPOCK3-224ENST00000515316 ABHD8Q96I13 439 aa29.28■■■□□ 2.28
SPOCK3-224ENST00000515316 MAF1Q9H063 256 aa29.28■■■□□ 2.28
SPOCK3-224ENST00000515316 PLXNB2O15031 1838 aa29.28■■■□□ 2.28
SPOCK3-224ENST00000515316 ELNP15502 786 aa29.27■■■□□ 2.28
SPOCK3-224ENST00000515316 UBXN2AP68543 259 aa29.27■■■□□ 2.28
SPOCK3-224ENST00000515316 CMTR1Q8N1G2 835 aaKnown RBP29.27■■■□□ 2.28
SPOCK3-224ENST00000515316 CCDC82Q8N4S0 544 aa29.27■■■□□ 2.28
SPOCK3-224ENST00000515316 NPLOC4Q8TAT6 608 aa29.27■■■□□ 2.28
SPOCK3-224ENST00000515316 SH3TC2Q8TF17 1288 aa29.27■■■□□ 2.28
SPOCK3-224ENST00000515316 FAM217BQ9NTX9 383 aaPredicted RBP29.27■■■□□ 2.28
SPOCK3-224ENST00000515316 PGK2P07205 417 aa29.26■■■□□ 2.27
SPOCK3-224ENST00000515316 CDC27P30260 824 aa29.26■■■□□ 2.27
SPOCK3-224ENST00000515316 ZNF792Q3KQV3 632 aa29.26■■■□□ 2.27
SPOCK3-224ENST00000515316 RGS22Q8NE09 1264 aa29.26■■■□□ 2.27
SPOCK3-224ENST00000515316 CLEC4DQ8WXI8 215 aa29.26■■■□□ 2.27
SPOCK3-224ENST00000515316 PIBF1Q8WXW3 757 aa29.26■■■□□ 2.27
SPOCK3-224ENST00000515316 A1CFQ9NQ94 594 aaKnown RBP29.26■■■□□ 2.27
SPOCK3-224ENST00000515316 PCDHA1Q9Y5I3 950 aa29.26■■■□□ 2.27
SPOCK3-224ENST00000515316 ZNF236Q9UL36 1845 aa29.26■■■□□ 2.27
SPOCK3-224ENST00000515316 NID2Q14112 1375 aa29.26■■■□□ 2.27
SPOCK3-224ENST00000515316 DNAJC25-GNG10A0A024R161 153 aa29.25■■■□□ 2.27
SPOCK3-224ENST00000515316 HMGCRP04035 888 aa29.25■■■□□ 2.27
SPOCK3-224ENST00000515316 ADD1P35611 737 aaKnown RBP29.25■■■□□ 2.27
SPOCK3-224ENST00000515316 AK2P54819 239 aa29.25■■■□□ 2.27
SPOCK3-224ENST00000515316 OLFML2BQ68BL8 750 aa29.25■■■□□ 2.27
SPOCK3-224ENST00000515316 NSMFQ6X4W1 530 aa29.25■■■□□ 2.27
SPOCK3-224ENST00000515316 MCF2L2Q86YR7 1114 aa29.25■■■□□ 2.27
SPOCK3-224ENST00000515316 IL27Q8NEV9 243 aa29.25■■■□□ 2.27
SPOCK3-224ENST00000515316 LARP6Q9BRS8 491 aaKnown RBP29.25■■■□□ 2.27
SPOCK3-224ENST00000515316 POTEB2H3BUK9 544 aa29.24■■■□□ 2.27
SPOCK3-224ENST00000515316 TAL1P17542 331 aaPredicted RBP29.24■■■□□ 2.27
SPOCK3-224ENST00000515316 MFSD14CQ5VZR4 134 aa29.24■■■□□ 2.27
SPOCK3-224ENST00000515316 TRIB2Q92519 343 aa29.24■■■□□ 2.27
SPOCK3-224ENST00000515316 KIF2CQ99661 725 aa29.24■■■□□ 2.27
SPOCK3-224ENST00000515316 CYP39A1Q9NYL5 469 aa29.24■■■□□ 2.27
SPOCK3-224ENST00000515316 NFIBO00712 420 aa29.23■■■□□ 2.27
SPOCK3-224ENST00000515316 PPP1R11O60927 126 aaPredicted RBP29.23■■■□□ 2.27
SPOCK3-224ENST00000515316 CCT2P78371 535 aaKnown RBP29.23■■■□□ 2.27
SPOCK3-224ENST00000515316 CCL14Q16627 93 aa29.23■■■□□ 2.27
SPOCK3-224ENST00000515316 RNF207Q6ZRF8 634 aa29.23■■■□□ 2.27
SPOCK3-224ENST00000515316 MAML3Q96JK9 1138 aa29.23■■■□□ 2.27
SPOCK3-224ENST00000515316 ZNF333Q96JL9 665 aa29.23■■■□□ 2.27
SPOCK3-224ENST00000515316 ZNFX1Q9P2E3 1918 aaKnown RBP29.23■■■□□ 2.27
SPOCK3-224ENST00000515316 PTPDC1A2A3K4 754 aa29.22■■■□□ 2.27
SPOCK3-224ENST00000515316 INHAP05111 366 aa29.22■■■□□ 2.27
SPOCK3-224ENST00000515316 FUT2Q10981 343 aa29.22■■■□□ 2.27
SPOCK3-224ENST00000515316 BAATQ14032 418 aaPredicted RBP29.22■■■□□ 2.27
SPOCK3-224ENST00000515316 TBC1D32Q96NH3 1257 aa29.22■■■□□ 2.27
SPOCK3-224ENST00000515316 BAZ2BQ9UIF8 2168 aaKnown RBP29.21■■■□□ 2.27
SPOCK3-224ENST00000515316 RABEP1Q15276 862 aa29.21■■■□□ 2.27
SPOCK3-224ENST00000515316 CPLX2Q6PUV4 134 aaKnown RBP29.21■■■□□ 2.27
SPOCK3-224ENST00000515316 ZNF467Q7Z7K2 595 aaPredicted RBP29.21■■■□□ 2.27
SPOCK3-224ENST00000515316 MSL3Q8N5Y2 521 aaKnown RBP29.21■■■□□ 2.27
SPOCK3-224ENST00000515316 SAMD3Q8N6K7 520 aa29.21■■■□□ 2.27
SPOCK3-224ENST00000515316 SLKQ9H2G2 1235 aaPredicted RBP29.21■■■□□ 2.27
SPOCK3-224ENST00000515316 FLRT1Q9NZU1 646 aa29.21■■■□□ 2.27
SPOCK3-224ENST00000515316 TPCN1Q9ULQ1 816 aa29.21■■■□□ 2.27
SPOCK3-224ENST00000515316 V9GY48 417 aaPredicted RBP29.21■■■□□ 2.27
SPOCK3-224ENST00000515316 CNTNAP5Q8WYK1 1306 aa29.2■■■□□ 2.27
SPOCK3-224ENST00000515316 FAM133AQ8N9E0 248 aa29.2■■■□□ 2.26
SPOCK3-224ENST00000515316 MAP3K20Q9NYL2 800 aaKnown RBP29.2■■■□□ 2.26
SPOCK3-224ENST00000515316 RBM27Q9P2N5 1060 aaKnown RBP29.2■■■□□ 2.26
SPOCK3-224ENST00000515316 MYH6P13533 1939 aa29.2■■■□□ 2.26
SPOCK3-224ENST00000515316 CPLX1O14810 134 aa29.19■■■□□ 2.26
SPOCK3-224ENST00000515316 RPS6P62753 249 aaKnown RBP29.19■■■□□ 2.26
SPOCK3-224ENST00000515316 AKAP17AQ02040 695 aaKnown RBP29.19■■■□□ 2.26
SPOCK3-224ENST00000515316 STK3Q13188 491 aa29.19■■■□□ 2.26
SPOCK3-224ENST00000515316 ADD3Q9UEY8 706 aaKnown RBP29.19■■■□□ 2.26
SPOCK3-224ENST00000515316 SMCHD1A6NHR9 2005 aa29.19■■■□□ 2.26
SPOCK3-224ENST00000515316 PFKFB2O60825 505 aa29.18■■■□□ 2.26
SPOCK3-224ENST00000515316 IFNAR1P17181 557 aa29.18■■■□□ 2.26
SPOCK3-224ENST00000515316 CALML3P27482 149 aa29.18■■■□□ 2.26
SPOCK3-224ENST00000515316 CNTN2Q02246 1040 aa29.18■■■□□ 2.26
SPOCK3-224ENST00000515316 TINF2Q9BSI4 451 aa29.18■■■□□ 2.26
SPOCK3-224ENST00000515316 NCOA5Q9HCD5 579 aaKnown RBP29.18■■■□□ 2.26
SPOCK3-224ENST00000515316 hCG_1642624A0A1W2PR95 340 aa29.17■■■□□ 2.26
SPOCK3-224ENST00000515316 CCDC85CA6NKD9 419 aa29.17■■■□□ 2.26
SPOCK3-224ENST00000515316 IGHA2P01877 340 aa29.17■■■□□ 2.26
SPOCK3-224ENST00000515316 NTRK3Q16288 839 aa29.17■■■□□ 2.26
SPOCK3-224ENST00000515316 MAMDC4Q6UXC1 1216 aa29.17■■■□□ 2.26
SPOCK3-224ENST00000515316 TMEM106CQ9BVX2 250 aa29.17■■■□□ 2.26
SPOCK3-224ENST00000515316 LIMCH1Q9UPQ0 1083 aa29.17■■■□□ 2.26
SPOCK3-224ENST00000515316 PRPF3O43395 683 aaKnown RBP29.16■■■□□ 2.26
SPOCK3-224ENST00000515316 CFBP00751 764 aa29.16■■■□□ 2.26
SPOCK3-224ENST00000515316 PRKAR2AP13861 404 aaKnown RBP29.16■■■□□ 2.26
SPOCK3-224ENST00000515316 CYP2C19P33261 490 aa29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms