RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 TMEM132BQ14DG7 1078 aa4.02□□□□□ -1.77
CHD1-211ENST00000514344 SPTY2D1Q68D10 685 aaPredicted RBP4.02□□□□□ -1.77
CHD1-211ENST00000514344 FOXP4Q8IVH2 680 aaPredicted RBP4.02□□□□□ -1.77
CHD1-211ENST00000514344 MRPL38Q96DV4 380 aaKnown RBP4.02□□□□□ -1.77
CHD1-211ENST00000514344 CHAMP1Q96JM3 812 aa4.02□□□□□ -1.77
CHD1-211ENST00000514344 SIP14410 1827 aa4.01□□□□□ -1.77
CHD1-211ENST00000514344 EYA2O00167 538 aa4.01□□□□□ -1.77
CHD1-211ENST00000514344 CTAGE5O15320 804 aa4.01□□□□□ -1.77
CHD1-211ENST00000514344 SP100P23497 879 aaPredicted RBP4.01□□□□□ -1.77
CHD1-211ENST00000514344 GTF2F1P35269 517 aaKnown RBP eCLIP4.01□□□□□ -1.77
CHD1-211ENST00000514344 EMP3P54852 163 aa4.01□□□□□ -1.77
CHD1-211ENST00000514344 GJA9P57773 515 aa4.01□□□□□ -1.77
CHD1-211ENST00000514344 CHMP4BP1P59074 171 aa4.01□□□□□ -1.77
CHD1-211ENST00000514344 ERVK-21P61565 698 aa4.01□□□□□ -1.77
CHD1-211ENST00000514344 WDR5P61964 334 aaKnown RBP4.01□□□□□ -1.77
CHD1-211ENST00000514344 FAM47CQ5HY64 1035 aa4.01□□□□□ -1.77
CHD1-211ENST00000514344 ANKRD44Q8N8A2 993 aa4.01□□□□□ -1.77
CHD1-211ENST00000514344 NSUN4Q96CB9 384 aaKnown RBP4.01□□□□□ -1.77
CHD1-211ENST00000514344 DDX11Q96FC9 970 aa4.01□□□□□ -1.77
CHD1-211ENST00000514344 ASIC4Q96FT7 647 aa4.01□□□□□ -1.77
CHD1-211ENST00000514344 RPGRIP1Q96KN7 1286 aa4.01□□□□□ -1.77
CHD1-211ENST00000514344 SRCIN1Q9C0H9 1055 aa4.01□□□□□ -1.77
CHD1-211ENST00000514344 ALDH8A1Q9H2A2 487 aaPredicted RBP4.01□□□□□ -1.77
CHD1-211ENST00000514344 IGFLR1Q9H665 355 aa4.01□□□□□ -1.77
CHD1-211ENST00000514344 COL11A1P12107 1806 aaPredicted RBP4.01□□□□□ -1.77
CHD1-211ENST00000514344 A0A1W2PRG0 241 aa4.01□□□□□ -1.77
CHD1-211ENST00000514344 MPHOSPH10O00566 681 aaKnown RBP4.01□□□□□ -1.77
CHD1-211ENST00000514344 RAD21O60216 631 aa4.01□□□□□ -1.77
CHD1-211ENST00000514344 GJB5O95377 273 aa4.01□□□□□ -1.77
CHD1-211ENST00000514344 HLA-DOAP06340 250 aa4.01□□□□□ -1.77
CHD1-211ENST00000514344 TIMM10P62072 90 aa4.01□□□□□ -1.77
CHD1-211ENST00000514344 SEPT2Q15019 361 aa4.01□□□□□ -1.77
CHD1-211ENST00000514344 PTPROQ16827 1216 aa4.01□□□□□ -1.77
CHD1-211ENST00000514344 ABCB5Q2M3G0 1257 aa4.01□□□□□ -1.77
CHD1-211ENST00000514344 NBPF20Q3BBV1 942 aa4.01□□□□□ -1.77
CHD1-211ENST00000514344 CERKLQ49MI3 558 aaPredicted RBP4.01□□□□□ -1.77
CHD1-211ENST00000514344 KIAA1755Q5JYT7 1200 aa4.01□□□□□ -1.77
CHD1-211ENST00000514344 RPAINQ86UA6 219 aa4.01□□□□□ -1.77
CHD1-211ENST00000514344 MB21D1Q8N884 522 aa4.01□□□□□ -1.77
CHD1-211ENST00000514344 SLC43A3Q8NBI5 491 aa4.01□□□□□ -1.77
CHD1-211ENST00000514344 NOL10Q9BSC4 688 aaKnown RBP4.01□□□□□ -1.77
CHD1-211ENST00000514344 FBXO28Q9NVF7 368 aa4.01□□□□□ -1.77
CHD1-211ENST00000514344 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.01□□□□□ -1.77
CHD1-211ENST00000514344 CEP126Q9P2H0 1117 aa4.01□□□□□ -1.77
CHD1-211ENST00000514344 DDX49Q9Y6V7 483 aaKnown RBP4.01□□□□□ -1.77
CHD1-211ENST00000514344 ASTN1O14525 1302 aa4□□□□□ -1.77
CHD1-211ENST00000514344 TRIP12Q14669 1992 aaPredicted RBP4□□□□□ -1.77
CHD1-211ENST00000514344 TBX10O75333 385 aa4□□□□□ -1.77
CHD1-211ENST00000514344 LDHCP07864 332 aa4□□□□□ -1.77
CHD1-211ENST00000514344 IQCF3P0C7M6 154 aa4□□□□□ -1.77
CHD1-211ENST00000514344 FSCN1Q16658 493 aaKnown RBP4□□□□□ -1.77
CHD1-211ENST00000514344 RABL6Q3YEC7 729 aaPredicted RBP4□□□□□ -1.77
CHD1-211ENST00000514344 TIGD5Q53EQ6 642 aa4□□□□□ -1.77
CHD1-211ENST00000514344 ATG9AQ7Z3C6 839 aa4□□□□□ -1.77
CHD1-211ENST00000514344 ZBTB33Q86T24 672 aa4□□□□□ -1.77
CHD1-211ENST00000514344 TLK2Q86UE8 772 aa4□□□□□ -1.77
CHD1-211ENST00000514344 CLEC10AQ8IUN9 316 aa4□□□□□ -1.77
CHD1-211ENST00000514344 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4□□□□□ -1.77
CHD1-211ENST00000514344 RAD9AQ99638 391 aa4□□□□□ -1.77
CHD1-211ENST00000514344 ABHD16BQ9H3Z7 469 aa4□□□□□ -1.77
CHD1-211ENST00000514344 CABP5Q9NP86 173 aa4□□□□□ -1.77
CHD1-211ENST00000514344 LRP2BPQ9P2M1 347 aa4□□□□□ -1.77
CHD1-211ENST00000514344 CTNNA3Q9UI47 895 aa4□□□□□ -1.77
CHD1-211ENST00000514344 DIS3Q9Y2L1 958 aaKnown RBP4□□□□□ -1.77
CHD1-211ENST00000514344 TNKSO95271 1327 aa4□□□□□ -1.77
CHD1-211ENST00000514344 OTOGLQ3ZCN5 2332 aa4□□□□□ -1.77
CHD1-211ENST00000514344 CEP295Q9C0D2 2601 aa4□□□□□ -1.77
CHD1-211ENST00000514344 DYNC1LI2O43237 492 aaPredicted RBP4□□□□□ -1.77
CHD1-211ENST00000514344 SLC25A27O95847 323 aa4□□□□□ -1.77
CHD1-211ENST00000514344 GSTO1P78417 241 aa4□□□□□ -1.77
CHD1-211ENST00000514344 TNFAIP2Q03169 654 aa4□□□□□ -1.77
CHD1-211ENST00000514344 EPC2Q52LR7 807 aa4□□□□□ -1.77
CHD1-211ENST00000514344 TMEM63BQ5T3F8 832 aa4□□□□□ -1.77
CHD1-211ENST00000514344 ATF7IPQ6VMQ6 1270 aa4□□□□□ -1.77
CHD1-211ENST00000514344 CCDC144CPQ8IYA2 1237 aa4□□□□□ -1.77
CHD1-211ENST00000514344 TMEM105Q8N8V8 129 aa4□□□□□ -1.77
CHD1-211ENST00000514344 UPF3AQ9H1J1 476 aaKnown RBP4□□□□□ -1.77
CHD1-211ENST00000514344 NSUN3Q9H649 340 aaKnown RBP4□□□□□ -1.77
CHD1-211ENST00000514344 SH2B1Q9NRF2 756 aaPredicted RBP4□□□□□ -1.77
CHD1-211ENST00000514344 GINM1Q9NU53 330 aa4□□□□□ -1.77
CHD1-211ENST00000514344 DSPP15924 2871 aaKnown RBP4□□□□□ -1.77
CHD1-211ENST00000514344 ASH1LQ9NR48 2969 aaKnown RBP4□□□□□ -1.77
CHD1-211ENST00000514344 FREM2Q5SZK8 3169 aa4□□□□□ -1.77
CHD1-211ENST00000514344 LINC01565O15544 149 aa3.99□□□□□ -1.77
CHD1-211ENST00000514344 SUPT20HL2P0C7V6 817 aa3.99□□□□□ -1.77
CHD1-211ENST00000514344 STAT3P40763 770 aa3.99□□□□□ -1.77
CHD1-211ENST00000514344 GPM6BQ13491 265 aa3.99□□□□□ -1.77
CHD1-211ENST00000514344 COL9A3Q14050 684 aaPredicted RBP3.99□□□□□ -1.77
CHD1-211ENST00000514344 MCTP2Q6DN12 878 aa3.99□□□□□ -1.77
CHD1-211ENST00000514344 ARMCX2Q7L311 632 aa3.99□□□□□ -1.77
CHD1-211ENST00000514344 EEPD1Q7L9B9 569 aa3.99□□□□□ -1.77
CHD1-211ENST00000514344 ADGRA1Q86SQ6 560 aa3.99□□□□□ -1.77
CHD1-211ENST00000514344 METTL16Q86W50 562 aaKnown RBP3.99□□□□□ -1.77
CHD1-211ENST00000514344 RETREG2Q8NC44 543 aa3.99□□□□□ -1.77
CHD1-211ENST00000514344 BMP2KQ9NSY1 1161 aaPredicted RBP3.99□□□□□ -1.77
CHD1-211ENST00000514344 SERPINB13Q9UIV8 391 aa3.99□□□□□ -1.77
CHD1-211ENST00000514344 NOD1Q9Y239 953 aa3.99□□□□□ -1.77
CHD1-211ENST00000514344 NAV2Q8IVL1 2488 aa3.99□□□□□ -1.77
CHD1-211ENST00000514344 DMXL2Q8TDJ6 3036 aa3.99□□□□□ -1.77
CHD1-211ENST00000514344 ALDH1L1O75891 902 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 468.3 ms