RNA–Protein interactions for RNA: ENST00000513588.5

CTNND2-215, Transcript of catenin delta 2, humanhuman

TSL 1 (best)

Gene CTNND2, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-215ENST00000513588 ZBED6P86452 979 aa12.78□□□□□ -0.36
CTNND2-215ENST00000513588 HLTFQ14527 1009 aaKnown RBP eCLIP12.78□□□□□ -0.36
CTNND2-215ENST00000513588 RETREG2Q8NC44 543 aa12.78□□□□□ -0.36
CTNND2-215ENST00000513588 SLC44A5Q8NCS7 719 aa12.78□□□□□ -0.36
CTNND2-215ENST00000513588 FAM76AQ8TAV0 307 aa12.78□□□□□ -0.36
CTNND2-215ENST00000513588 AK8Q96MA6 479 aa12.78□□□□□ -0.36
CTNND2-215ENST00000513588 FUT8Q9BYC5 575 aa12.78□□□□□ -0.36
CTNND2-215ENST00000513588 NHEJ1Q9H9Q4 299 aaPredicted RBP12.78□□□□□ -0.36
CTNND2-215ENST00000513588 MED4Q9NPJ6 270 aa12.78□□□□□ -0.36
CTNND2-215ENST00000513588 TRIM10Q9UDY6 481 aa12.78□□□□□ -0.36
CTNND2-215ENST00000513588 TACC3Q9Y6A5 838 aa12.78□□□□□ -0.36
CTNND2-215ENST00000513588 UFL1O94874 794 aa12.77□□□□□ -0.36
CTNND2-215ENST00000513588 ERVK-24P63145 666 aa12.77□□□□□ -0.36
CTNND2-215ENST00000513588 SND1Q7KZF4 910 aaKnown RBP eCLIP12.77□□□□□ -0.36
CTNND2-215ENST00000513588 ANKRD13CQ8N6S4 541 aa12.77□□□□□ -0.36
CTNND2-215ENST00000513588 SPAG5Q96R06 1193 aa12.77□□□□□ -0.36
CTNND2-215ENST00000513588 UIMC1Q96RL1 719 aa12.77□□□□□ -0.36
CTNND2-215ENST00000513588 RASSF4Q9H2L5 321 aa12.77□□□□□ -0.36
CTNND2-215ENST00000513588 NLRC4Q9NPP4 1024 aa12.77□□□□□ -0.36
CTNND2-215ENST00000513588 SH3GLB2Q9NR46 395 aa12.77□□□□□ -0.36
CTNND2-215ENST00000513588 LMTK3Q96Q04 1460 aa12.77□□□□□ -0.36
CTNND2-215ENST00000513588 USP54Q70EL1 1684 aa12.77□□□□□ -0.37
CTNND2-215ENST00000513588 GOLGA6BA6NDN3 693 aa12.77□□□□□ -0.37
CTNND2-215ENST00000513588 ACTN2P35609 894 aa12.77□□□□□ -0.37
CTNND2-215ENST00000513588 ITPK1Q13572 414 aa12.77□□□□□ -0.37
CTNND2-215ENST00000513588 FAM98CQ17RN3 349 aaKnown RBP12.77□□□□□ -0.37
CTNND2-215ENST00000513588 MAGEF1Q9HAY2 307 aa12.77□□□□□ -0.37
CTNND2-215ENST00000513588 CLSTN1O94985 981 aa12.77□□□□□ -0.37
CTNND2-215ENST00000513588 USP17L2Q6R6M4 530 aa12.77□□□□□ -0.37
CTNND2-215ENST00000513588 ADSSL1Q8N142 457 aa12.77□□□□□ -0.37
CTNND2-215ENST00000513588 FAM204AQ9H8W3 233 aa12.77□□□□□ -0.37
CTNND2-215ENST00000513588 SPEF2Q9C093 1822 aa12.76□□□□□ -0.37
CTNND2-215ENST00000513588 WTIPA6NIX2 430 aaPredicted RBP12.76□□□□□ -0.37
CTNND2-215ENST00000513588 SASH3O75995 380 aa12.76□□□□□ -0.37
CTNND2-215ENST00000513588 KIAA0754O94854 1291 aa12.76□□□□□ -0.37
CTNND2-215ENST00000513588 ADCY7P51828 1080 aa12.76□□□□□ -0.37
CTNND2-215ENST00000513588 VAV2P52735 878 aa12.76□□□□□ -0.37
CTNND2-215ENST00000513588 SMIM5Q71RC9 77 aa12.76□□□□□ -0.37
CTNND2-215ENST00000513588 TBCKQ8TEA7 893 aa12.76□□□□□ -0.37
CTNND2-215ENST00000513588 SUGCTQ9HAC7 445 aa12.76□□□□□ -0.37
CTNND2-215ENST00000513588 SRP68Q9UHB9 627 aaKnown RBP12.76□□□□□ -0.37
CTNND2-215ENST00000513588 BCL9O00512 1426 aa12.76□□□□□ -0.37
CTNND2-215ENST00000513588 A0A0U1RQJ8 604 aa12.76□□□□□ -0.37
CTNND2-215ENST00000513588 OPA1O60313 960 aa12.76□□□□□ -0.37
CTNND2-215ENST00000513588 RBM5P52756 815 aaKnown RBP eCLIP12.76□□□□□ -0.37
CTNND2-215ENST00000513588 C8orf74Q6P047 294 aa12.76□□□□□ -0.37
CTNND2-215ENST00000513588 CNBD1Q8NA66 436 aa12.76□□□□□ -0.37
CTNND2-215ENST00000513588 ATRIPQ8WXE1 791 aa12.76□□□□□ -0.37
CTNND2-215ENST00000513588 TBC1D7Q9P0N9 293 aa12.76□□□□□ -0.37
CTNND2-215ENST00000513588 GOLGA6CA6NDK9 693 aa12.76□□□□□ -0.37
CTNND2-215ENST00000513588 TMCO5BA8MYB1 307 aa12.76□□□□□ -0.37
CTNND2-215ENST00000513588 GOLGA6DP0CG33 693 aa12.76□□□□□ -0.37
CTNND2-215ENST00000513588 ZNF76P36508 570 aa12.76□□□□□ -0.37
CTNND2-215ENST00000513588 RAPGEF1Q13905 1077 aa12.76□□□□□ -0.37
CTNND2-215ENST00000513588 TXNRD1Q16881 649 aa12.76□□□□□ -0.37
CTNND2-215ENST00000513588 SH3RF1Q7Z6J0 888 aa12.76□□□□□ -0.37
CTNND2-215ENST00000513588 CCDC170Q8IYT3 715 aa12.76□□□□□ -0.37
CTNND2-215ENST00000513588 NOA1Q8NC60 698 aaKnown RBP12.76□□□□□ -0.37
CTNND2-215ENST00000513588 SH3RF3Q8TEJ3 882 aaPredicted RBP12.76□□□□□ -0.37
CTNND2-215ENST00000513588 IFT81Q8WYA0 676 aa12.76□□□□□ -0.37
CTNND2-215ENST00000513588 GOLGA6AQ9NYA3 693 aa12.76□□□□□ -0.37
CTNND2-215ENST00000513588 FRMPD2Q68DX3 1309 aaPredicted RBP12.76□□□□□ -0.37
CTNND2-215ENST00000513588 KCNQ2O43526 872 aa12.75□□□□□ -0.37
CTNND2-215ENST00000513588 BTDP43251 543 aa12.75□□□□□ -0.37
CTNND2-215ENST00000513588 SF3B3Q15393 1217 aaKnown RBP12.75□□□□□ -0.37
CTNND2-215ENST00000513588 NOX5Q96PH1 765 aa12.75□□□□□ -0.37
CTNND2-215ENST00000513588 PNKPQ96T60 521 aa12.75□□□□□ -0.37
CTNND2-215ENST00000513588 TMEM47Q9BQJ4 181 aa12.75□□□□□ -0.37
CTNND2-215ENST00000513588 TMEM60Q9H2L4 133 aa12.75□□□□□ -0.37
CTNND2-215ENST00000513588 CCNL1Q9UK58 526 aaPredicted RBP12.75□□□□□ -0.37
CTNND2-215ENST00000513588 A0A1W2PQC6 194 aa12.75□□□□□ -0.37
CTNND2-215ENST00000513588 WNT7AO00755 349 aa12.75□□□□□ -0.37
CTNND2-215ENST00000513588 TFRCP02786 760 aaKnown RBP12.75□□□□□ -0.37
CTNND2-215ENST00000513588 RAD51AP2Q09MP3 1159 aa12.75□□□□□ -0.37
CTNND2-215ENST00000513588 TNS2Q63HR2 1409 aa12.75□□□□□ -0.37
CTNND2-215ENST00000513588 PDXDC2PQ6P474 469 aa12.75□□□□□ -0.37
CTNND2-215ENST00000513588 SPATA20Q8TB22 786 aa12.75□□□□□ -0.37
CTNND2-215ENST00000513588 PHRF1Q9P1Y6 1649 aaKnown RBP12.75□□□□□ -0.37
CTNND2-215ENST00000513588 RNF40O75150 1001 aa12.75□□□□□ -0.37
CTNND2-215ENST00000513588 ATP1A1P05023 1023 aaKnown RBP12.75□□□□□ -0.37
CTNND2-215ENST00000513588 KLRK1P26718 216 aa12.75□□□□□ -0.37
CTNND2-215ENST00000513588 RNASE9P60153 205 aaKnown RBP12.75□□□□□ -0.37
CTNND2-215ENST00000513588 SETQ01105 290 aaPredicted RBP12.75□□□□□ -0.37
CTNND2-215ENST00000513588 SLC9C1Q4G0N8 1177 aa12.75□□□□□ -0.37
CTNND2-215ENST00000513588 ODF2Q5BJF6 829 aa12.75□□□□□ -0.37
CTNND2-215ENST00000513588 TBC1D9BQ66K14 1250 aa12.75□□□□□ -0.37
CTNND2-215ENST00000513588 VPS36Q86VN1 386 aa12.75□□□□□ -0.37
CTNND2-215ENST00000513588 NELFCDQ8IXH7 590 aa12.75□□□□□ -0.37
CTNND2-215ENST00000513588 IQCDQ96DY2 449 aa12.75□□□□□ -0.37
CTNND2-215ENST00000513588 PIGSQ96S52 555 aa12.75□□□□□ -0.37
CTNND2-215ENST00000513588 CAPN11Q9UMQ6 739 aa12.75□□□□□ -0.37
CTNND2-215ENST00000513588 MRPL12P52815 198 aaKnown RBP12.74□□□□□ -0.37
CTNND2-215ENST00000513588 KCNB1Q14721 858 aa12.74□□□□□ -0.37
CTNND2-215ENST00000513588 GRM4Q14833 912 aa12.74□□□□□ -0.37
CTNND2-215ENST00000513588 SEPT11Q9NVA2 429 aaKnown RBP12.74□□□□□ -0.37
CTNND2-215ENST00000513588 TFR2Q9UP52 801 aa12.74□□□□□ -0.37
CTNND2-215ENST00000513588 MAATS1Q7Z4T9 603 aa12.74□□□□□ -0.37
CTNND2-215ENST00000513588 LARP4BQ92615 738 aaKnown RBP12.74□□□□□ -0.37
CTNND2-215ENST00000513588 RABEP2Q9H5N1 569 aa12.74□□□□□ -0.37
CTNND2-215ENST00000513588 AGPAT5Q9NUQ2 364 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms