RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	FBXO2	Q9UK22	296 aa	Predicted RBP	12.34	□□□□□ -0.43
PDCD6-210	ENST00000513582	PALLD	Q8WX93	1383 aa		12.34	□□□□□ -0.43
PDCD6-210	ENST00000513582	KCNJ18	B7U540	433 aa		12.34	□□□□□ -0.43
PDCD6-210	ENST00000513582	EYA2	O00167	538 aa		12.34	□□□□□ -0.43
PDCD6-210	ENST00000513582	GLI1	P08151	1106 aa		12.34	□□□□□ -0.43
PDCD6-210	ENST00000513582	KIF5A	Q12840	1032 aa		12.34	□□□□□ -0.43
PDCD6-210	ENST00000513582	ITGB3BP	Q13352	177 aa	Predicted RBP	12.34	□□□□□ -0.43
PDCD6-210	ENST00000513582	KCNJ12	Q14500	433 aa		12.34	□□□□□ -0.43
PDCD6-210	ENST00000513582	TRADD	Q15628	312 aa		12.34	□□□□□ -0.43
PDCD6-210	ENST00000513582	MAEA	Q7L5Y9	396 aa		12.34	□□□□□ -0.43
PDCD6-210	ENST00000513582	MS4A14	Q96JA4	679 aa		12.34	□□□□□ -0.43
PDCD6-210	ENST00000513582	PLCD4	Q9BRC7	762 aa		12.34	□□□□□ -0.43
PDCD6-210	ENST00000513582	UBAC1	Q9BSL1	405 aa		12.34	□□□□□ -0.43
PDCD6-210	ENST00000513582	ZCWPW1	Q9H0M4	648 aa		12.34	□□□□□ -0.43
PDCD6-210	ENST00000513582	MLXIP	Q9HAP2	919 aa		12.34	□□□□□ -0.43
PDCD6-210	ENST00000513582	BATF3	Q9NR55	127 aa		12.34	□□□□□ -0.43
PDCD6-210	ENST00000513582	HELLS	Q9NRZ9	838 aa		12.34	□□□□□ -0.43
PDCD6-210	ENST00000513582	RBM12	Q9NTZ6	932 aa	Known RBP	12.34	□□□□□ -0.43
PDCD6-210	ENST00000513582	LRWD1	Q9UFC0	647 aa		12.34	□□□□□ -0.43
PDCD6-210	ENST00000513582	SNX12	Q9UMY4	172 aa		12.34	□□□□□ -0.43
PDCD6-210	ENST00000513582	C15orf41	Q9Y2V0	281 aa		12.34	□□□□□ -0.43
PDCD6-210	ENST00000513582	KDM6A	O15550	1401 aa	Predicted RBP	12.34	□□□□□ -0.43
PDCD6-210	ENST00000513582	CEMIP	Q8WUJ3	1361 aa		12.34	□□□□□ -0.43
PDCD6-210	ENST00000513582		A0A087X0B3	334 aa		12.34	□□□□□ -0.43
PDCD6-210	ENST00000513582	PPP1R3G	B7ZBB8	358 aa		12.34	□□□□□ -0.43
PDCD6-210	ENST00000513582	ZC3H12A	Q5D1E8	599 aa	Known RBP	12.34	□□□□□ -0.43
PDCD6-210	ENST00000513582	MIS18BP1	Q6P0N0	1132 aa		12.34	□□□□□ -0.43
PDCD6-210	ENST00000513582	IQCK	Q8N0W5	287 aa		12.34	□□□□□ -0.43
PDCD6-210	ENST00000513582	SENP2	Q9HC62	589 aa		12.34	□□□□□ -0.43
PDCD6-210	ENST00000513582	PLAA	Q9Y263	795 aa		12.34	□□□□□ -0.43
PDCD6-210	ENST00000513582	CAPN6	Q9Y6Q1	641 aa		12.34	□□□□□ -0.43
PDCD6-210	ENST00000513582	MOCS3	O95396	460 aa		12.33	□□□□□ -0.43
PDCD6-210	ENST00000513582	IL15	P40933	162 aa	Predicted RBP	12.33	□□□□□ -0.43
PDCD6-210	ENST00000513582	TOB1	P50616	345 aa	Predicted RBP	12.33	□□□□□ -0.43
PDCD6-210	ENST00000513582	TRAF1	Q13077	416 aa		12.33	□□□□□ -0.43
PDCD6-210	ENST00000513582	XRCC4	Q13426	336 aa		12.33	□□□□□ -0.43
PDCD6-210	ENST00000513582	WDR59	Q6PJI9	974 aa		12.33	□□□□□ -0.43
PDCD6-210	ENST00000513582	NBPF5P	Q86XG9	351 aa	Predicted RBP	12.33	□□□□□ -0.43
PDCD6-210	ENST00000513582	TRIM22	Q8IYM9	498 aa		12.33	□□□□□ -0.43
PDCD6-210	ENST00000513582	RAB27A	P51159	221 aa		12.33	□□□□□ -0.44
PDCD6-210	ENST00000513582	SCARF1	Q14162	830 aa		12.33	□□□□□ -0.44
PDCD6-210	ENST00000513582	NOSTRIN	Q8IVI9	506 aa		12.33	□□□□□ -0.44
PDCD6-210	ENST00000513582	MAGEB6	Q8N7X4	407 aa		12.33	□□□□□ -0.44
PDCD6-210	ENST00000513582	CCDC47	Q96A33	483 aa	Known RBP	12.33	□□□□□ -0.44
PDCD6-210	ENST00000513582	DCAF5	Q96JK2	942 aa		12.33	□□□□□ -0.44
PDCD6-210	ENST00000513582	ZNF570	Q96NI8	536 aa		12.33	□□□□□ -0.44
PDCD6-210	ENST00000513582	PUS7L	Q9H0K6	701 aa	Known RBP	12.33	□□□□□ -0.44
PDCD6-210	ENST00000513582	ARMT1	Q9H993	441 aa		12.33	□□□□□ -0.44
PDCD6-210	ENST00000513582	ZBTB43	O43298	467 aa		12.33	□□□□□ -0.44
PDCD6-210	ENST00000513582	HEXIM1	O94992	359 aa	Known RBP	12.33	□□□□□ -0.44
PDCD6-210	ENST00000513582	PTPRE	P23469	700 aa		12.33	□□□□□ -0.44
PDCD6-210	ENST00000513582	NR5A1	Q13285	461 aa		12.33	□□□□□ -0.44
PDCD6-210	ENST00000513582	ZMYM1	Q5SVZ6	1142 aa		12.33	□□□□□ -0.44
PDCD6-210	ENST00000513582	KANK3	Q6NY19	840 aa		12.33	□□□□□ -0.44
PDCD6-210	ENST00000513582	ANKRD13C	Q8N6S4	541 aa		12.33	□□□□□ -0.44
PDCD6-210	ENST00000513582	CAVIN3	Q969G5	261 aa		12.33	□□□□□ -0.44
PDCD6-210	ENST00000513582	AGPAT5	Q9NUQ2	364 aa		12.33	□□□□□ -0.44
PDCD6-210	ENST00000513582	PYGL	P06737	847 aa		12.32	□□□□□ -0.44
PDCD6-210	ENST00000513582	PAFAH1B1	P43034	410 aa		12.32	□□□□□ -0.44
PDCD6-210	ENST00000513582	TCP11X2	Q5H9J9	407 aa		12.32	□□□□□ -0.44
PDCD6-210	ENST00000513582	DIS3L2	Q8IYB7	885 aa	Known RBP	12.32	□□□□□ -0.44
PDCD6-210	ENST00000513582	PAGE5	Q96GU1	130 aa		12.32	□□□□□ -0.44
PDCD6-210	ENST00000513582	OSBPL9	Q96SU4	736 aa		12.32	□□□□□ -0.44
PDCD6-210	ENST00000513582	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	12.32	□□□□□ -0.44
PDCD6-210	ENST00000513582	SMNDC1	O75940	238 aa	Known RBP eCLIP	12.32	□□□□□ -0.44	8e-9	■■■■□ 21
PDCD6-210	ENST00000513582	CYLC1	P35663	651 aa	Predicted RBP	12.32	□□□□□ -0.44
PDCD6-210	ENST00000513582	TRIM14	Q14142	442 aa		12.32	□□□□□ -0.44
PDCD6-210	ENST00000513582	FAM133B	Q5BKY9	247 aa	Known RBP	12.32	□□□□□ -0.44
PDCD6-210	ENST00000513582	GKAP1	Q5VSY0	366 aa	Predicted RBP	12.32	□□□□□ -0.44
PDCD6-210	ENST00000513582	IFT20	Q8IY31	132 aa		12.32	□□□□□ -0.44
PDCD6-210	ENST00000513582	CCDC63	Q8NA47	563 aa		12.32	□□□□□ -0.44
PDCD6-210	ENST00000513582	PIK3R5	Q8WYR1	880 aa		12.32	□□□□□ -0.44
PDCD6-210	ENST00000513582	NALCN	Q8IZF0	1738 aa		12.32	□□□□□ -0.44
PDCD6-210	ENST00000513582	TRIM21	P19474	475 aa	Known RBP	12.32	□□□□□ -0.44
PDCD6-210	ENST00000513582	HLTF	Q14527	1009 aa	Known RBP eCLIP	12.32	□□□□□ -0.44	2e-11	■■■■□ 23.2
PDCD6-210	ENST00000513582	ENOX2	Q16206	610 aa	Known RBP	12.32	□□□□□ -0.44
PDCD6-210	ENST00000513582	MB21D2	Q8IYB1	491 aa	Predicted RBP	12.32	□□□□□ -0.44
PDCD6-210	ENST00000513582	NKX2-3	Q8TAU0	364 aa		12.32	□□□□□ -0.44
PDCD6-210	ENST00000513582	AGAP11	Q8TF27	550 aa		12.32	□□□□□ -0.44
PDCD6-210	ENST00000513582	UBR1	Q8IWV7	1749 aa		12.31	□□□□□ -0.44
PDCD6-210	ENST00000513582	TOPAZ1	Q8N9V7	1692 aa		12.31	□□□□□ -0.44
PDCD6-210	ENST00000513582	ANO9	A1A5B4	782 aa		12.31	□□□□□ -0.44
PDCD6-210	ENST00000513582	HMGB1P1	B2RPK0	211 aa	Predicted RBP	12.31	□□□□□ -0.44
PDCD6-210	ENST00000513582	KLK7	P49862	253 aa		12.31	□□□□□ -0.44
PDCD6-210	ENST00000513582	EBF2	Q9HAK2	575 aa		12.31	□□□□□ -0.44
PDCD6-210	ENST00000513582	PANK4	Q9NVE7	773 aa		12.31	□□□□□ -0.44
PDCD6-210	ENST00000513582	ZNHIT6	Q9NWK9	470 aa	Known RBP	12.31	□□□□□ -0.44
PDCD6-210	ENST00000513582	GGA2	Q9UJY4	613 aa		12.31	□□□□□ -0.44
PDCD6-210	ENST00000513582	ANKAR	Q7Z5J8	1434 aa		12.31	□□□□□ -0.44
PDCD6-210	ENST00000513582	GCOM1	H8Y6P7	765 aa	Predicted RBP	12.31	□□□□□ -0.44
PDCD6-210	ENST00000513582	TACC1	O75410	805 aa		12.31	□□□□□ -0.44
PDCD6-210	ENST00000513582	CDKL5	O76039	1030 aa		12.31	□□□□□ -0.44
PDCD6-210	ENST00000513582	MBD4	O95243	580 aa		12.31	□□□□□ -0.44
PDCD6-210	ENST00000513582	MYZAP	P0CAP1	466 aa		12.31	□□□□□ -0.44
PDCD6-210	ENST00000513582	ITGA6	P23229	1130 aa		12.31	□□□□□ -0.44
PDCD6-210	ENST00000513582	GUCY1A2	P33402	732 aa		12.31	□□□□□ -0.44
PDCD6-210	ENST00000513582	TRIM68	Q6AZZ1	485 aa		12.31	□□□□□ -0.44
PDCD6-210	ENST00000513582	CHADL	Q6NUI6	762 aa		12.31	□□□□□ -0.44
PDCD6-210	ENST00000513582	LIMA1	Q9UHB6	759 aa	Known RBP	12.31	□□□□□ -0.44
PDCD6-210	ENST00000513582	TRIM49B	A6NDI0	452 aa		12.31	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms