RNA–Protein interactions for RNA: ENST00000513263.1

SKP2-207, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-207ENST00000513263 SALL3Q9BXA9 1300 aa12.95□□□□□ -0.34
SKP2-207ENST00000513263 TRANK1O15050 2925 aa12.95□□□□□ -0.34
SKP2-207ENST00000513263 B4DLN1 442 aa12.95□□□□□ -0.34
SKP2-207ENST00000513263 RANBP6O60518 1105 aaKnown RBP12.95□□□□□ -0.34
SKP2-207ENST00000513263 ICAM1P05362 532 aa12.95□□□□□ -0.34
SKP2-207ENST00000513263 ALAS1P13196 640 aa12.95□□□□□ -0.34
SKP2-207ENST00000513263 MCCP23508 829 aa12.95□□□□□ -0.34
SKP2-207ENST00000513263 MRPL12P52815 198 aaKnown RBP12.95□□□□□ -0.34
SKP2-207ENST00000513263 CCDC96Q2M329 555 aa12.95□□□□□ -0.34
SKP2-207ENST00000513263 BRDTQ58F21 947 aaPredicted RBP12.95□□□□□ -0.34
SKP2-207ENST00000513263 NOL8Q76FK4 1167 aaKnown RBP12.95□□□□□ -0.34
SKP2-207ENST00000513263 MAFAQ8NHW3 353 aaPredicted RBP12.95□□□□□ -0.34
SKP2-207ENST00000513263 FAM161BQ96MY7 647 aa12.95□□□□□ -0.34
SKP2-207ENST00000513263 SEC62Q99442 399 aaKnown RBP12.95□□□□□ -0.34
SKP2-207ENST00000513263 CDX2Q99626 313 aaPredicted RBP12.95□□□□□ -0.34
SKP2-207ENST00000513263 MAF1Q9H063 256 aa12.95□□□□□ -0.34
SKP2-207ENST00000513263 RNF41Q9H4P4 317 aaPredicted RBP12.95□□□□□ -0.34
SKP2-207ENST00000513263 CCPG1Q9ULG6 757 aa12.95□□□□□ -0.34
SKP2-207ENST00000513263 PRR12Q9ULL5 1215 aa12.95□□□□□ -0.34
SKP2-207ENST00000513263 CHD9Q3L8U1 2897 aa12.95□□□□□ -0.34
SKP2-207ENST00000513263 ZNF536O15090 1300 aa12.94□□□□□ -0.34
SKP2-207ENST00000513263 FGRP09769 529 aa12.94□□□□□ -0.34
SKP2-207ENST00000513263 TOP1P11387 765 aaKnown RBP12.94□□□□□ -0.34
SKP2-207ENST00000513263 DNAJB2P25686 324 aa12.94□□□□□ -0.34
SKP2-207ENST00000513263 NOVP48745 357 aa12.94□□□□□ -0.34
SKP2-207ENST00000513263 CDK7P50613 346 aa12.94□□□□□ -0.34
SKP2-207ENST00000513263 RRP1P56182 461 aaKnown RBP12.94□□□□□ -0.34
SKP2-207ENST00000513263 HDAC1Q13547 482 aaPredicted RBP12.94□□□□□ -0.34
SKP2-207ENST00000513263 FSCN1Q16658 493 aaKnown RBP12.94□□□□□ -0.34
SKP2-207ENST00000513263 FAM126BQ8IXS8 530 aa12.94□□□□□ -0.34
SKP2-207ENST00000513263 SYMPKQ92797 1274 aaKnown RBP12.94□□□□□ -0.34
SKP2-207ENST00000513263 FGD4Q96M96 766 aa12.94□□□□□ -0.34
SKP2-207ENST00000513263 KATNBL1Q9H079 304 aa12.94□□□□□ -0.34
SKP2-207ENST00000513263 RANBP17Q9H2T7 1088 aaKnown RBP12.94□□□□□ -0.34
SKP2-207ENST00000513263 TCP11L1Q9NUJ3 509 aa12.94□□□□□ -0.34
SKP2-207ENST00000513263 CPT1AP50416 773 aa12.93□□□□□ -0.34
SKP2-207ENST00000513263 RAB30Q15771 203 aa12.93□□□□□ -0.34
SKP2-207ENST00000513263 MCMDC2Q4G0Z9 681 aa12.93□□□□□ -0.34
SKP2-207ENST00000513263 CCDC178Q5BJE1 867 aa12.93□□□□□ -0.34
SKP2-207ENST00000513263 IQSEC1Q6DN90 963 aa12.93□□□□□ -0.34
SKP2-207ENST00000513263 BTNL9Q6UXG8 535 aa12.93□□□□□ -0.34
SKP2-207ENST00000513263 KCTD1Q719H9 257 aa12.93□□□□□ -0.34
SKP2-207ENST00000513263 TIFAQ96CG3 184 aa12.93□□□□□ -0.34
SKP2-207ENST00000513263 AGBL1Q96MI9 1066 aa12.93□□□□□ -0.34
SKP2-207ENST00000513263 TTC14Q96N46 770 aa12.93□□□□□ -0.34
SKP2-207ENST00000513263 TOMM22Q9NS69 142 aa12.93□□□□□ -0.34
SKP2-207ENST00000513263 POLR3EQ9NVU0 708 aa12.93□□□□□ -0.34
SKP2-207ENST00000513263 CYP39A1Q9NYL5 469 aa12.93□□□□□ -0.34
SKP2-207ENST00000513263 CHD7Q9P2D1 2997 aa12.93□□□□□ -0.34
SKP2-207ENST00000513263 GNEQ9Y223 722 aaKnown RBP12.93□□□□□ -0.34
SKP2-207ENST00000513263 PCDHB15Q9Y5E8 787 aa12.93□□□□□ -0.34
SKP2-207ENST00000513263 WDR19Q8NEZ3 1342 aa12.92□□□□□ -0.34
SKP2-207ENST00000513263 MYADML2A6NDP7 307 aa12.92□□□□□ -0.34
SKP2-207ENST00000513263 NKRFO15226 690 aaKnown RBP eCLIP12.92□□□□□ -0.34
SKP2-207ENST00000513263 PFKMP08237 780 aa12.92□□□□□ -0.34
SKP2-207ENST00000513263 ITGB8P26012 769 aa12.92□□□□□ -0.34
SKP2-207ENST00000513263 PDE1AP54750 535 aa12.92□□□□□ -0.34
SKP2-207ENST00000513263 CNTN2Q02246 1040 aa12.92□□□□□ -0.34
SKP2-207ENST00000513263 GPATCH4Q5T3I0 446 aaKnown RBP12.92□□□□□ -0.34
SKP2-207ENST00000513263 ANKRD45Q5TZF3 282 aa12.92□□□□□ -0.34
SKP2-207ENST00000513263 MORC4Q8TE76 937 aa12.92□□□□□ -0.34
SKP2-207ENST00000513263 GAS2L1Q99501 681 aaPredicted RBP12.92□□□□□ -0.34
SKP2-207ENST00000513263 TTYH1Q9H313 450 aaPredicted RBP12.92□□□□□ -0.34
SKP2-207ENST00000513263 IL17RBQ9NRM6 502 aa12.92□□□□□ -0.34
SKP2-207ENST00000513263 CCDC171Q6TFL3 1326 aa12.91□□□□□ -0.34
SKP2-207ENST00000513263 HIP1O00291 1037 aa12.91□□□□□ -0.34
SKP2-207ENST00000513263 ADCY6O43306 1168 aa12.91□□□□□ -0.34
SKP2-207ENST00000513263 CD4P01730 458 aa12.91□□□□□ -0.34
SKP2-207ENST00000513263 SUPT20HL2P0C7V6 817 aa12.91□□□□□ -0.34
SKP2-207ENST00000513263 CTDSPL2Q05D32 466 aa12.91□□□□□ -0.34
SKP2-207ENST00000513263 ITGA7Q13683 1181 aa12.91□□□□□ -0.34
SKP2-207ENST00000513263 SYDE2Q5VT97 1194 aa12.91□□□□□ -0.34
SKP2-207ENST00000513263 NSMFQ6X4W1 530 aa12.91□□□□□ -0.34
SKP2-207ENST00000513263 MFSD6Q6ZSS7 791 aa12.91□□□□□ -0.34
SKP2-207ENST00000513263 SLC43A3Q8NBI5 491 aa12.91□□□□□ -0.34
SKP2-207ENST00000513263 OTUD7AQ8TE49 926 aaPredicted RBP12.91□□□□□ -0.34
SKP2-207ENST00000513263 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.91□□□□□ -0.346e-7■■■□□ 18.5
SKP2-207ENST00000513263 HIPK3Q9H422 1215 aa12.91□□□□□ -0.34
SKP2-207ENST00000513263 IL23AQ9NPF7 189 aa12.91□□□□□ -0.34
SKP2-207ENST00000513263 SOWAHBA6NEL2 793 aa12.9□□□□□ -0.34
SKP2-207ENST00000513263 FOXP2O15409 715 aa12.9□□□□□ -0.34
SKP2-207ENST00000513263 KPNA6O60684 536 aa12.9□□□□□ -0.34
SKP2-207ENST00000513263 DUSP28Q4G0W2 176 aa12.9□□□□□ -0.34
SKP2-207ENST00000513263 RASIP1Q5U651 963 aa12.9□□□□□ -0.34
SKP2-207ENST00000513263 IQCA1Q86XH1 822 aa12.9□□□□□ -0.34
SKP2-207ENST00000513263 FBXO16Q8IX29 292 aaPredicted RBP12.9□□□□□ -0.34
SKP2-207ENST00000513263 RPUSD2Q8IZ73 545 aaKnown RBP12.9□□□□□ -0.34
SKP2-207ENST00000513263 DNERQ8NFT8 737 aa12.9□□□□□ -0.34
SKP2-207ENST00000513263 MYLIPQ8WY64 445 aa12.9□□□□□ -0.34
SKP2-207ENST00000513263 ESR2Q92731 530 aa12.9□□□□□ -0.34
SKP2-207ENST00000513263 ZNF576Q9H609 170 aa12.9□□□□□ -0.34
SKP2-207ENST00000513263 MSRAQ9UJ68 235 aa12.9□□□□□ -0.34
SKP2-207ENST00000513263 TRIP12Q14669 1992 aaPredicted RBP12.9□□□□□ -0.34
SKP2-207ENST00000513263 BDP1A6H8Y1 2624 aa12.89□□□□□ -0.35
SKP2-207ENST00000513263 PTPDC1A2A3K4 754 aa12.89□□□□□ -0.35
SKP2-207ENST00000513263 TRIM6-TRIM34B2RNG4 842 aa12.89□□□□□ -0.35
SKP2-207ENST00000513263 CTAGE5O15320 804 aa12.89□□□□□ -0.35
SKP2-207ENST00000513263 NMT2O60551 498 aa12.89□□□□□ -0.35
SKP2-207ENST00000513263 FGAP02671 866 aa12.89□□□□□ -0.35
SKP2-207ENST00000513263 HSPD1P10809 573 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms