RNA–Protein interactions for RNA: ENST00000513159.5

PTPN20-227, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-227ENST00000513159 FBXO11Q86XK2 927 aa11.99□□□□□ -0.49
PTPN20-227ENST00000513159 ERO1AQ96HE7 468 aa11.99□□□□□ -0.49
PTPN20-227ENST00000513159 FGD4Q96M96 766 aa11.99□□□□□ -0.49
PTPN20-227ENST00000513159 TRERF1Q96PN7 1200 aa11.99□□□□□ -0.49
PTPN20-227ENST00000513159 SLKQ9H2G2 1235 aaPredicted RBP11.99□□□□□ -0.49
PTPN20-227ENST00000513159 PRDM10Q9NQV6 1147 aa11.99□□□□□ -0.49
PTPN20-227ENST00000513159 HOMER2Q9NSB8 354 aa11.99□□□□□ -0.49
PTPN20-227ENST00000513159 RNF146Q9NTX7 359 aa11.99□□□□□ -0.49
PTPN20-227ENST00000513159 ASTN1O14525 1302 aa11.99□□□□□ -0.49
PTPN20-227ENST00000513159 LRRC37A2A6NM11 1700 aa11.99□□□□□ -0.49
PTPN20-227ENST00000513159 CENPFP49454 3210 aa11.98□□□□□ -0.49
PTPN20-227ENST00000513159 MYH7BA7E2Y1 1941 aa11.98□□□□□ -0.49
PTPN20-227ENST00000513159 KIAA1217Q5T5P2 1943 aa11.98□□□□□ -0.49
PTPN20-227ENST00000513159 DNAJC25-GNG10A0A024R161 153 aa11.98□□□□□ -0.49
PTPN20-227ENST00000513159 TNPO2O14787 897 aaKnown RBP11.98□□□□□ -0.49
PTPN20-227ENST00000513159 PRPF3O43395 683 aaKnown RBP11.98□□□□□ -0.49
PTPN20-227ENST00000513159 FCGRTP55899 365 aa11.98□□□□□ -0.49
PTPN20-227ENST00000513159 CCNA1P78396 465 aa11.98□□□□□ -0.49
PTPN20-227ENST00000513159 PRKCZQ05513 592 aa11.98□□□□□ -0.49
PTPN20-227ENST00000513159 WWC2Q6AWC2 1192 aa11.98□□□□□ -0.49
PTPN20-227ENST00000513159 PLEKHH3Q7Z736 793 aa11.98□□□□□ -0.49
PTPN20-227ENST00000513159 NSUN7Q8NE18 718 aaKnown RBP11.98□□□□□ -0.49
PTPN20-227ENST00000513159 CHST13Q8NET6 341 aa11.98□□□□□ -0.49
PTPN20-227ENST00000513159 GPKOWQ92917 476 aaPredicted RBP eCLIP11.98□□□□□ -0.49
PTPN20-227ENST00000513159 RRP36Q96EU6 259 aaKnown RBP11.98□□□□□ -0.49
PTPN20-227ENST00000513159 AIFM3Q96NN9 605 aa11.98□□□□□ -0.49
PTPN20-227ENST00000513159 PURBQ96QR8 312 aaKnown RBP11.98□□□□□ -0.49
PTPN20-227ENST00000513159 AMNQ9BXJ7 453 aa11.98□□□□□ -0.49
PTPN20-227ENST00000513159 MROH8Q9H579 483 aa11.98□□□□□ -0.49
PTPN20-227ENST00000513159 A1CFQ9NQ94 594 aaKnown RBP11.98□□□□□ -0.49
PTPN20-227ENST00000513159 SRRDQ9UH36 339 aa11.98□□□□□ -0.49
PTPN20-227ENST00000513159 TRIM17Q9Y577 477 aa11.98□□□□□ -0.49
PTPN20-227ENST00000513159 SLC15A5A6NIM6 579 aa11.97□□□□□ -0.49
PTPN20-227ENST00000513159 JAK2O60674 1132 aa11.97□□□□□ -0.49
PTPN20-227ENST00000513159 FMNL1O95466 1100 aaPredicted RBP11.97□□□□□ -0.49
PTPN20-227ENST00000513159 PGK2P07205 417 aa11.97□□□□□ -0.49
PTPN20-227ENST00000513159 ADORA2AP29274 412 aa11.97□□□□□ -0.49
PTPN20-227ENST00000513159 FLT3LGP49771 235 aa11.97□□□□□ -0.49
PTPN20-227ENST00000513159 GHRHRQ02643 423 aa11.97□□□□□ -0.49
PTPN20-227ENST00000513159 TKFCQ3LXA3 575 aa11.97□□□□□ -0.49
PTPN20-227ENST00000513159 WDR78Q5VTH9 848 aa11.97□□□□□ -0.49
PTPN20-227ENST00000513159 CCDC83Q8IWF9 413 aa11.97□□□□□ -0.49
PTPN20-227ENST00000513159 NPLOC4Q8TAT6 608 aa11.97□□□□□ -0.49
PTPN20-227ENST00000513159 TMX3Q96JJ7 454 aa11.97□□□□□ -0.49
PTPN20-227ENST00000513159 RNF26Q9BY78 433 aaPredicted RBP11.97□□□□□ -0.49
PTPN20-227ENST00000513159 ACAD9Q9H845 621 aa11.97□□□□□ -0.49
PTPN20-227ENST00000513159 FLRT1Q9NZU1 646 aa11.97□□□□□ -0.49
PTPN20-227ENST00000513159 COL20A1Q9P218 1284 aa11.97□□□□□ -0.49
PTPN20-227ENST00000513159 PCDHA1Q9Y5I3 950 aa11.97□□□□□ -0.49
PTPN20-227ENST00000513159 ABCB11O95342 1321 aa11.96□□□□□ -0.49
PTPN20-227ENST00000513159 CCDC196A0A1B0GTZ2 297 aa11.96□□□□□ -0.49
PTPN20-227ENST00000513159 STXBP3O00186 592 aa11.96□□□□□ -0.49
PTPN20-227ENST00000513159 ST18O60284 1047 aa11.96□□□□□ -0.49
PTPN20-227ENST00000513159 HOXC6P09630 235 aa11.96□□□□□ -0.49
PTPN20-227ENST00000513159 CNTN2Q02246 1040 aa11.96□□□□□ -0.49
PTPN20-227ENST00000513159 MAP2K5Q13163 448 aa11.96□□□□□ -0.49
PTPN20-227ENST00000513159 CCL14Q16627 93 aa11.96□□□□□ -0.49
PTPN20-227ENST00000513159 PFKFB3Q16875 520 aaPredicted RBP11.96□□□□□ -0.49
PTPN20-227ENST00000513159 ZNF792Q3KQV3 632 aa11.96□□□□□ -0.49
PTPN20-227ENST00000513159 SLC30A10Q6XR72 485 aa11.96□□□□□ -0.49
PTPN20-227ENST00000513159 CTU1Q7Z7A3 348 aaKnown RBP11.96□□□□□ -0.49
PTPN20-227ENST00000513159 ABRAQ8N0Z2 381 aa11.96□□□□□ -0.49
PTPN20-227ENST00000513159 FAM133AQ8N9E0 248 aa11.96□□□□□ -0.49
PTPN20-227ENST00000513159 SMARCC2Q8TAQ2 1214 aa11.96□□□□□ -0.49
PTPN20-227ENST00000513159 ZSCAN31Q96LW9 406 aaPredicted RBP11.96□□□□□ -0.49
PTPN20-227ENST00000513159 MMP19Q99542 508 aa11.96□□□□□ -0.49
PTPN20-227ENST00000513159 SLC26A6Q9BXS9 759 aa11.96□□□□□ -0.49
PTPN20-227ENST00000513159 GJB4Q9NTQ9 266 aa11.96□□□□□ -0.49
PTPN20-227ENST00000513159 CYP39A1Q9NYL5 469 aa11.96□□□□□ -0.49
PTPN20-227ENST00000513159 PTPN22Q9Y2R2 807 aa11.96□□□□□ -0.49
PTPN20-227ENST00000513159 CTDP1Q9Y5B0 961 aaPredicted RBP11.96□□□□□ -0.49
PTPN20-227ENST00000513159 PTCH2Q9Y6C5 1203 aa11.96□□□□□ -0.49
PTPN20-227ENST00000513159 DDX49Q9Y6V7 483 aaKnown RBP11.96□□□□□ -0.49
PTPN20-227ENST00000513159 STK36Q9NRP7 1315 aa11.95□□□□□ -0.5
PTPN20-227ENST00000513159 SOWAHBA6NEL2 793 aa11.95□□□□□ -0.5
PTPN20-227ENST00000513159 STRNO43815 780 aa11.95□□□□□ -0.5
PTPN20-227ENST00000513159 FCER1AP12319 257 aa11.95□□□□□ -0.5
PTPN20-227ENST00000513159 SCG2P13521 617 aa11.95□□□□□ -0.5
PTPN20-227ENST00000513159 CYP2B6P20813 491 aa11.95□□□□□ -0.5
PTPN20-227ENST00000513159 COPB2P35606 906 aa11.95□□□□□ -0.5
PTPN20-227ENST00000513159 BAATQ14032 418 aaPredicted RBP11.95□□□□□ -0.5
PTPN20-227ENST00000513159 KIF22Q14807 665 aa11.95□□□□□ -0.5
PTPN20-227ENST00000513159 NPY5RQ15761 445 aa11.95□□□□□ -0.5
PTPN20-227ENST00000513159 COL13A1Q5TAT6 717 aaPredicted RBP11.95□□□□□ -0.5
PTPN20-227ENST00000513159 IL27Q8NEV9 243 aa11.95□□□□□ -0.5
PTPN20-227ENST00000513159 SNX21Q969T3 373 aa11.95□□□□□ -0.5
PTPN20-227ENST00000513159 SH2B1Q9NRF2 756 aaPredicted RBP11.95□□□□□ -0.5
PTPN20-227ENST00000513159 FBXO40Q9UH90 709 aa11.95□□□□□ -0.5
PTPN20-227ENST00000513159 PTPDC1A2A3K4 754 aa11.94□□□□□ -0.5
PTPN20-227ENST00000513159 MEIS2O14770 477 aa11.94□□□□□ -0.5
PTPN20-227ENST00000513159 GNRH1P01148 92 aa11.94□□□□□ -0.5
PTPN20-227ENST00000513159 HSD17B4P51659 736 aa11.94□□□□□ -0.5
PTPN20-227ENST00000513159 RPS6P62753 249 aaKnown RBP11.94□□□□□ -0.5
PTPN20-227ENST00000513159 SSRP1Q08945 709 aaKnown RBP11.94□□□□□ -0.5
PTPN20-227ENST00000513159 TRIM32Q13049 653 aa11.94□□□□□ -0.5
PTPN20-227ENST00000513159 IRF5Q13568 498 aa11.94□□□□□ -0.5
PTPN20-227ENST00000513159 CUL4AQ13619 759 aa11.94□□□□□ -0.5
PTPN20-227ENST00000513159 NSMFQ6X4W1 530 aa11.94□□□□□ -0.5
PTPN20-227ENST00000513159 HEATR3Q7Z4Q2 680 aa11.94□□□□□ -0.5
PTPN20-227ENST00000513159 RGS22Q8NE09 1264 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms