RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 TMEM240Q5SV17 173 aa14.86□□□□□ -0.03
VEGFA-216ENST00000512683 BTNL9Q6UXG8 535 aa14.86□□□□□ -0.03
VEGFA-216ENST00000512683 DCAF4Q8WV16 495 aa14.86□□□□□ -0.03
VEGFA-216ENST00000512683 AGBL1Q96MI9 1066 aa14.86□□□□□ -0.03
VEGFA-216ENST00000512683 TTC14Q96N46 770 aa14.86□□□□□ -0.03
VEGFA-216ENST00000512683 VTA1Q9NP79 307 aa14.86□□□□□ -0.03
VEGFA-216ENST00000512683 IL17RBQ9NRM6 502 aa14.86□□□□□ -0.03
VEGFA-216ENST00000512683 CYP39A1Q9NYL5 469 aa14.86□□□□□ -0.03
VEGFA-216ENST00000512683 ADD3Q9UEY8 706 aaKnown RBP14.86□□□□□ -0.03
VEGFA-216ENST00000512683 PRR12Q9ULL5 1215 aa14.86□□□□□ -0.03
VEGFA-216ENST00000512683 ICAM1P05362 532 aa14.85□□□□□ -0.03
VEGFA-216ENST00000512683 DNAJB2P25686 324 aa14.85□□□□□ -0.03
VEGFA-216ENST00000512683 AAMPQ13685 434 aa14.85□□□□□ -0.03
VEGFA-216ENST00000512683 FSCN1Q16658 493 aaKnown RBP14.85□□□□□ -0.03
VEGFA-216ENST00000512683 ANKRD45Q5TZF3 282 aa14.85□□□□□ -0.03
VEGFA-216ENST00000512683 NOL8Q76FK4 1167 aaKnown RBP14.85□□□□□ -0.03
VEGFA-216ENST00000512683 MYLIPQ8WY64 445 aa14.85□□□□□ -0.03
VEGFA-216ENST00000512683 TIFAQ96CG3 184 aa14.85□□□□□ -0.03
VEGFA-216ENST00000512683 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.85□□□□□ -0.033e-17■■■□□ 17.1
VEGFA-216ENST00000512683 ZNF576Q9H609 170 aa14.85□□□□□ -0.03
VEGFA-216ENST00000512683 HOMER2Q9NSB8 354 aa14.85□□□□□ -0.03
VEGFA-216ENST00000512683 ISY1Q9ULR0 285 aaKnown RBP14.85□□□□□ -0.03
VEGFA-216ENST00000512683 DNAH12Q6ZR08 3092 aa14.85□□□□□ -0.03
VEGFA-216ENST00000512683 ADCY6O43306 1168 aa14.84□□□□□ -0.03
VEGFA-216ENST00000512683 RANBP6O60518 1105 aaKnown RBP14.84□□□□□ -0.03
VEGFA-216ENST00000512683 SUPT20HL2P0C7V6 817 aa14.84□□□□□ -0.03
VEGFA-216ENST00000512683 TOP1P11387 765 aaKnown RBP14.84□□□□□ -0.03
VEGFA-216ENST00000512683 ALAS1P13196 640 aa14.84□□□□□ -0.03
VEGFA-216ENST00000512683 RAB30Q15771 203 aa14.84□□□□□ -0.03
VEGFA-216ENST00000512683 C16orf59Q7L2K0 433 aa14.84□□□□□ -0.03
VEGFA-216ENST00000512683 RPUSD2Q8IZ73 545 aaKnown RBP14.84□□□□□ -0.03
VEGFA-216ENST00000512683 HERVK_113Q902F9 699 aa14.84□□□□□ -0.03
VEGFA-216ENST00000512683 MPHOSPH6Q99547 160 aaKnown RBP14.84□□□□□ -0.03
VEGFA-216ENST00000512683 RANBP17Q9H2T7 1088 aaKnown RBP14.84□□□□□ -0.03
VEGFA-216ENST00000512683 IL23AQ9NPF7 189 aa14.84□□□□□ -0.03
VEGFA-216ENST00000512683 FRMPD3Q5JV73 1810 aa14.84□□□□□ -0.03
VEGFA-216ENST00000512683 DYNC1LI2O43237 492 aaPredicted RBP14.83□□□□□ -0.04
VEGFA-216ENST00000512683 FGBP02675 491 aa14.83□□□□□ -0.04
VEGFA-216ENST00000512683 CSF2RAP15509 400 aa14.83□□□□□ -0.04
VEGFA-216ENST00000512683 ITGA7Q13683 1181 aa14.83□□□□□ -0.04
VEGFA-216ENST00000512683 GRIN2CQ14957 1233 aa14.83□□□□□ -0.04
VEGFA-216ENST00000512683 MCMDC2Q4G0Z9 681 aa14.83□□□□□ -0.04
VEGFA-216ENST00000512683 TAPT1Q6NXT6 567 aa14.83□□□□□ -0.04
VEGFA-216ENST00000512683 ZNF365Q70YC5 407 aa14.83□□□□□ -0.04
VEGFA-216ENST00000512683 KCTD1Q719H9 257 aa14.83□□□□□ -0.04
VEGFA-216ENST00000512683 TLK2Q86UE8 772 aa14.83□□□□□ -0.04
VEGFA-216ENST00000512683 CCPG1Q9ULG6 757 aa14.83□□□□□ -0.04
VEGFA-216ENST00000512683 RBM47A0AV96 593 aaKnown RBP14.82□□□□□ -0.04
VEGFA-216ENST00000512683 B4DLN1 442 aa14.82□□□□□ -0.04
VEGFA-216ENST00000512683 SMPD1P17405 629 aa14.82□□□□□ -0.04
VEGFA-216ENST00000512683 MRPL12P52815 198 aaKnown RBP14.82□□□□□ -0.04
VEGFA-216ENST00000512683 DUSP28Q4G0W2 176 aa14.82□□□□□ -0.04
VEGFA-216ENST00000512683 BRDTQ58F21 947 aaPredicted RBP14.82□□□□□ -0.04
VEGFA-216ENST00000512683 AKNAD1Q5T1N1 836 aa14.82□□□□□ -0.04
VEGFA-216ENST00000512683 CXCL17Q6UXB2 119 aa14.82□□□□□ -0.04
VEGFA-216ENST00000512683 POLR3EQ9NVU0 708 aa14.82□□□□□ -0.04
VEGFA-216ENST00000512683 MSRAQ9UJ68 235 aa14.82□□□□□ -0.04
VEGFA-216ENST00000512683 ZMYM6O95789 1325 aa14.82□□□□□ -0.04
VEGFA-216ENST00000512683 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.81□□□□□ -0.04
VEGFA-216ENST00000512683 NKRFO15226 690 aaKnown RBP eCLIP14.81□□□□□ -0.041e-7■□□□□ 10.5
VEGFA-216ENST00000512683 FOXP2O15409 715 aa14.81□□□□□ -0.04
VEGFA-216ENST00000512683 KPNA6O60684 536 aa14.81□□□□□ -0.04
VEGFA-216ENST00000512683 FGAP02671 866 aa14.81□□□□□ -0.04
VEGFA-216ENST00000512683 PFKMP08237 780 aa14.81□□□□□ -0.04
VEGFA-216ENST00000512683 PDE1AP54750 535 aa14.81□□□□□ -0.04
VEGFA-216ENST00000512683 MFAP1P55081 439 aaKnown RBP14.81□□□□□ -0.04
VEGFA-216ENST00000512683 BEX3Q00994 111 aa14.81□□□□□ -0.04
VEGFA-216ENST00000512683 CCDC178Q5BJE1 867 aa14.81□□□□□ -0.04
VEGFA-216ENST00000512683 KIAA1211Q6ZU35 1233 aa14.81□□□□□ -0.04
VEGFA-216ENST00000512683 RGS22Q8NE09 1264 aa14.81□□□□□ -0.04
VEGFA-216ENST00000512683 GAS2L1Q99501 681 aaPredicted RBP14.81□□□□□ -0.04
VEGFA-216ENST00000512683 HIPK3Q9H422 1215 aa14.81□□□□□ -0.04
VEGFA-216ENST00000512683 ASTN1O14525 1302 aa14.81□□□□□ -0.04
VEGFA-216ENST00000512683 PLXNA1Q9UIW2 1896 aa14.8□□□□□ -0.04
VEGFA-216ENST00000512683 SMCHD1A6NHR9 2005 aa14.8□□□□□ -0.04
VEGFA-216ENST00000512683 IRX5P78411 483 aaPredicted RBP14.8□□□□□ -0.04
VEGFA-216ENST00000512683 CTDSPL2Q05D32 466 aa14.8□□□□□ -0.04
VEGFA-216ENST00000512683 BAATQ14032 418 aaPredicted RBP14.8□□□□□ -0.04
VEGFA-216ENST00000512683 CCDC96Q2M329 555 aa14.8□□□□□ -0.04
VEGFA-216ENST00000512683 MUM1L1Q5H9M0 696 aa14.8□□□□□ -0.04
VEGFA-216ENST00000512683 SYDE2Q5VT97 1194 aa14.8□□□□□ -0.04
VEGFA-216ENST00000512683 NSMFQ6X4W1 530 aa14.8□□□□□ -0.04
VEGFA-216ENST00000512683 SMC5Q8IY18 1101 aa14.8□□□□□ -0.04
VEGFA-216ENST00000512683 DNERQ8NFT8 737 aa14.8□□□□□ -0.04
VEGFA-216ENST00000512683 TMEM47Q9BQJ4 181 aa14.8□□□□□ -0.04
VEGFA-216ENST00000512683 PBX4Q9BYU1 374 aa14.8□□□□□ -0.04
VEGFA-216ENST00000512683 RNF41Q9H4P4 317 aaPredicted RBP14.8□□□□□ -0.04
VEGFA-216ENST00000512683 LTBP2Q14767 1821 aa14.8□□□□□ -0.04
VEGFA-216ENST00000512683 GRIN2DO15399 1336 aa14.79□□□□□ -0.04
VEGFA-216ENST00000512683 IGHDP01880 384 aa14.79□□□□□ -0.04
VEGFA-216ENST00000512683 CYP2C18P33260 490 aa14.79□□□□□ -0.04
VEGFA-216ENST00000512683 CPT1AP50416 773 aa14.79□□□□□ -0.04
VEGFA-216ENST00000512683 GPATCH4Q5T3I0 446 aaKnown RBP14.79□□□□□ -0.04
VEGFA-216ENST00000512683 VPS53Q5VIR6 699 aa14.79□□□□□ -0.04
VEGFA-216ENST00000512683 WDR19Q8NEZ3 1342 aa14.79□□□□□ -0.04
VEGFA-216ENST00000512683 EXOC6Q8TAG9 804 aa14.79□□□□□ -0.04
VEGFA-216ENST00000512683 ATXN2LQ8WWM7 1075 aaKnown RBP14.79□□□□□ -0.04
VEGFA-216ENST00000512683 WDR11Q9BZH6 1224 aa14.79□□□□□ -0.04
VEGFA-216ENST00000512683 PPP1R12CQ9BZL4 782 aa14.79□□□□□ -0.04
VEGFA-216ENST00000512683 INCENPQ9NQS7 918 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms