RNA–Protein interactions for RNA: ENST00000512193.5

NEK1-208, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-208ENST00000512193 DHTKD1Q96HY7 919 aaPredicted RBP8.88□□□□□ -0.99
NEK1-208ENST00000512193 PIGSQ96S52 555 aa8.88□□□□□ -0.99
NEK1-208ENST00000512193 NKIRAS1Q9NYS0 192 aa8.88□□□□□ -0.99
NEK1-208ENST00000512193 SERPINA10Q9UK55 444 aa8.88□□□□□ -0.99
NEK1-208ENST00000512193 AMFRQ9UKV5 643 aa8.88□□□□□ -0.99
NEK1-208ENST00000512193 USP31Q70CQ4 1352 aa8.88□□□□□ -0.99
NEK1-208ENST00000512193 USP42Q9H9J4 1324 aaKnown RBP8.88□□□□□ -0.99
NEK1-208ENST00000512193 A0A0G2JLW4 131 aa8.88□□□□□ -0.99
NEK1-208ENST00000512193 GAS7O60861 476 aa8.88□□□□□ -0.99
NEK1-208ENST00000512193 GNA14O95837 355 aa8.88□□□□□ -0.99
NEK1-208ENST00000512193 PRR29P0C7W0 189 aa8.88□□□□□ -0.99
NEK1-208ENST00000512193 CYP2D6P10635 497 aa8.88□□□□□ -0.99
NEK1-208ENST00000512193 SLC16A2P36021 539 aa8.88□□□□□ -0.99
NEK1-208ENST00000512193 MRPS25P82663 173 aaKnown RBP8.88□□□□□ -0.99
NEK1-208ENST00000512193 PABPC4Q13310 644 aaKnown RBP eCLIP8.88□□□□□ -0.99
NEK1-208ENST00000512193 KMT5BQ4FZB7 885 aa8.88□□□□□ -0.99
NEK1-208ENST00000512193 WDR44Q5JSH3 913 aa8.88□□□□□ -0.99
NEK1-208ENST00000512193 UHMK1Q8TAS1 419 aaKnown RBP8.88□□□□□ -0.99
NEK1-208ENST00000512193 FAM71BQ8TC56 605 aa8.88□□□□□ -0.99
NEK1-208ENST00000512193 PPM1EQ8WY54 764 aa8.88□□□□□ -0.99
NEK1-208ENST00000512193 DPF2Q92785 391 aa8.88□□□□□ -0.99
NEK1-208ENST00000512193 KIFC2Q96AC6 838 aa8.88□□□□□ -0.99
NEK1-208ENST00000512193 ALDH8A1Q9H2A2 487 aaPredicted RBP8.88□□□□□ -0.99
NEK1-208ENST00000512193 LY9Q9HBG7 655 aa8.88□□□□□ -0.99
NEK1-208ENST00000512193 MED4Q9NPJ6 270 aa8.88□□□□□ -0.99
NEK1-208ENST00000512193 KDM3AQ9Y4C1 1321 aa8.88□□□□□ -0.99
NEK1-208ENST00000512193 TEX33O43247 280 aa8.88□□□□□ -0.99
NEK1-208ENST00000512193 PLCG1P19174 1290 aa8.88□□□□□ -0.99
NEK1-208ENST00000512193 CTNNA1P35221 906 aaKnown RBP8.88□□□□□ -0.99
NEK1-208ENST00000512193 MECOMQ03112 1051 aa8.88□□□□□ -0.99
NEK1-208ENST00000512193 CUL4BQ13620 913 aa8.88□□□□□ -0.99
NEK1-208ENST00000512193 RABL6Q3YEC7 729 aaPredicted RBP8.88□□□□□ -0.99
NEK1-208ENST00000512193 ARMCX5Q6P1M9 558 aa8.88□□□□□ -0.99
NEK1-208ENST00000512193 PLCD3Q8N3E9 789 aa8.88□□□□□ -0.99
NEK1-208ENST00000512193 KIFAP3Q92845 792 aa8.88□□□□□ -0.99
NEK1-208ENST00000512193 RWDD2AQ9UIY3 292 aa8.88□□□□□ -0.99
NEK1-208ENST00000512193 USTQ9Y2C2 406 aa8.88□□□□□ -0.99
NEK1-208ENST00000512193 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.88□□□□□ -0.99
NEK1-208ENST00000512193 CPS1P31327 1500 aa8.88□□□□□ -0.99
NEK1-208ENST00000512193 UBN2Q6ZU65 1347 aa8.88□□□□□ -0.99
NEK1-208ENST00000512193 MFAP3LO75121 409 aa8.87□□□□□ -0.99
NEK1-208ENST00000512193 CCNE1P24864 410 aa8.87□□□□□ -0.99
NEK1-208ENST00000512193 PANX2Q96RD6 677 aa8.87□□□□□ -0.99
NEK1-208ENST00000512193 ZCCHC17Q9NP64 241 aaKnown RBP8.87□□□□□ -0.99
NEK1-208ENST00000512193 CEP83Q9Y592 693 aa8.87□□□□□ -0.99
NEK1-208ENST00000512193 POLR1AO95602 1720 aaPredicted RBP8.87□□□□□ -0.99
NEK1-208ENST00000512193 ZNF609O15014 1411 aa8.87□□□□□ -0.99
NEK1-208ENST00000512193 A6NNZ2 444 aa8.87□□□□□ -0.99
NEK1-208ENST00000512193 ATP8B1O43520 1251 aa8.87□□□□□ -0.99
NEK1-208ENST00000512193 PRDX5P30044 214 aa8.87□□□□□ -0.99
NEK1-208ENST00000512193 MXRA7P84157 204 aa8.87□□□□□ -0.99
NEK1-208ENST00000512193 TUBB8Q3ZCM7 444 aa8.87□□□□□ -0.99
NEK1-208ENST00000512193 PNMA8AQ86V59 439 aaPredicted RBP8.87□□□□□ -0.99
NEK1-208ENST00000512193 SYCE1Q8N0S2 351 aa8.87□□□□□ -0.99
NEK1-208ENST00000512193 JDP2Q8WYK2 163 aa8.87□□□□□ -0.99
NEK1-208ENST00000512193 ISCA1Q9BUE6 129 aa8.87□□□□□ -0.99
NEK1-208ENST00000512193 SH2D4AQ9H788 454 aa8.87□□□□□ -0.99
NEK1-208ENST00000512193 ABCB6Q9NP58 842 aa8.87□□□□□ -0.99
NEK1-208ENST00000512193 NCAPD2Q15021 1401 aa8.87□□□□□ -0.99
NEK1-208ENST00000512193 NMT2O60551 498 aa8.87□□□□□ -0.99
NEK1-208ENST00000512193 BCRP11274 1271 aa8.87□□□□□ -0.99
NEK1-208ENST00000512193 GUCY1A2P33402 732 aa8.87□□□□□ -0.99
NEK1-208ENST00000512193 VPS41P49754 854 aa8.87□□□□□ -0.99
NEK1-208ENST00000512193 LIG3P49916 1009 aa8.87□□□□□ -0.99
NEK1-208ENST00000512193 UAP1Q16222 522 aaPredicted RBP8.87□□□□□ -0.99
NEK1-208ENST00000512193 SLFN13Q68D06 897 aa8.87□□□□□ -0.99
NEK1-208ENST00000512193 GBP6Q6ZN66 633 aa8.87□□□□□ -0.99
NEK1-208ENST00000512193 KRT12Q99456 494 aa8.87□□□□□ -0.99
NEK1-208ENST00000512193 CAPS2Q9BXY5 557 aa8.87□□□□□ -0.99
NEK1-208ENST00000512193 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.87□□□□□ -0.99
NEK1-208ENST00000512193 TRIM49BA6NDI0 452 aa8.87□□□□□ -0.99
NEK1-208ENST00000512193 NR2F2P24468 414 aa8.87□□□□□ -0.99
NEK1-208ENST00000512193 EIF4A3P38919 411 aaKnown RBP8.87□□□□□ -0.99
NEK1-208ENST00000512193 CCT5P48643 541 aa8.87□□□□□ -0.99
NEK1-208ENST00000512193 ZBED6P86452 979 aa8.87□□□□□ -0.99
NEK1-208ENST00000512193 FKBP3Q00688 224 aaKnown RBP8.87□□□□□ -0.99
NEK1-208ENST00000512193 TERF2Q15554 542 aa8.87□□□□□ -0.99
NEK1-208ENST00000512193 TMTC3Q6ZXV5 915 aa8.87□□□□□ -0.99
NEK1-208ENST00000512193 NRKQ7Z2Y5 1582 aa8.87□□□□□ -0.99
NEK1-208ENST00000512193 FAM178BQ8IXR5 827 aa8.87□□□□□ -0.99
NEK1-208ENST00000512193 ENAHQ8N8S7 591 aaPredicted RBP8.87□□□□□ -0.99
NEK1-208ENST00000512193 STAG1Q8WVM7 1258 aa8.87□□□□□ -0.99
NEK1-208ENST00000512193 GSG1L2A8MUP6 293 aa8.86□□□□□ -0.99
NEK1-208ENST00000512193 SEMA3EO15041 775 aa8.86□□□□□ -0.99
NEK1-208ENST00000512193 ECM2O94769 699 aaPredicted RBP8.86□□□□□ -0.99
NEK1-208ENST00000512193 ATP2B4P23634 1241 aa8.86□□□□□ -0.99
NEK1-208ENST00000512193 MAN2A1Q16706 1144 aa8.86□□□□□ -0.99
NEK1-208ENST00000512193 EXOC3L4Q17RC7 722 aa8.86□□□□□ -0.99
NEK1-208ENST00000512193 CERKLQ49MI3 558 aaPredicted RBP8.86□□□□□ -0.99
NEK1-208ENST00000512193 TCP11X2Q5H9J9 407 aa8.86□□□□□ -0.99
NEK1-208ENST00000512193 C6orf163Q5TEZ5 329 aa8.86□□□□□ -0.99
NEK1-208ENST00000512193 KCTD1Q719H9 257 aa8.86□□□□□ -0.99
NEK1-208ENST00000512193 POTEDQ86YR6 584 aa8.86□□□□□ -0.99
NEK1-208ENST00000512193 CCDC63Q8NA47 563 aa8.86□□□□□ -0.99
NEK1-208ENST00000512193 AK8Q96MA6 479 aa8.86□□□□□ -0.99
NEK1-208ENST00000512193 GPR101Q96P66 508 aaPredicted RBP8.86□□□□□ -0.99
NEK1-208ENST00000512193 DNAI2Q9GZS0 605 aa8.86□□□□□ -0.99
NEK1-208ENST00000512193 CUEDC2Q9H467 287 aa8.86□□□□□ -0.99
NEK1-208ENST00000512193 SRP68Q9UHB9 627 aaKnown RBP8.86□□□□□ -0.99
NEK1-208ENST00000512193 MYO3AQ8NEV4 1616 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms