RNA–Protein interactions for RNA: ENST00000512153.5

COPB2-208, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 4

Gene COPB2, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-208ENST00000512153 ERC1Q8IUD2 1116 aa12.76□□□□□ -0.37
COPB2-208ENST00000512153 FAM178BQ8IXR5 827 aa12.76□□□□□ -0.37
COPB2-208ENST00000512153 TRMT2AQ8IZ69 625 aaKnown RBP12.76□□□□□ -0.37
COPB2-208ENST00000512153 STK11IPQ8N1F8 1099 aa12.76□□□□□ -0.37
COPB2-208ENST00000512153 CRBNQ96SW2 442 aa12.76□□□□□ -0.37
COPB2-208ENST00000512153 MKNK2Q9HBH9 465 aa12.76□□□□□ -0.37
COPB2-208ENST00000512153 TNNQ9UQP3 1299 aa12.76□□□□□ -0.37
COPB2-208ENST00000512153 ASTN1O14525 1302 aa12.76□□□□□ -0.37
COPB2-208ENST00000512153 TNKSO95271 1327 aa12.76□□□□□ -0.37
COPB2-208ENST00000512153 LRRC37A2A6NM11 1700 aa12.75□□□□□ -0.37
COPB2-208ENST00000512153 ZNF536O15090 1300 aa12.75□□□□□ -0.37
COPB2-208ENST00000512153 NDUFB10O96000 172 aa12.75□□□□□ -0.37
COPB2-208ENST00000512153 MYL3P08590 195 aa12.75□□□□□ -0.37
COPB2-208ENST00000512153 KCNA5P22460 613 aa12.75□□□□□ -0.37
COPB2-208ENST00000512153 RFC2P35250 354 aa12.75□□□□□ -0.37
COPB2-208ENST00000512153 IKQ13123 557 aaPredicted RBP12.75□□□□□ -0.37
COPB2-208ENST00000512153 KIAA1211Q6ZU35 1233 aa12.75□□□□□ -0.37
COPB2-208ENST00000512153 TMEM57Q8N5G2 664 aa12.75□□□□□ -0.37
COPB2-208ENST00000512153 FGD4Q96M96 766 aa12.75□□□□□ -0.37
COPB2-208ENST00000512153 FBXL18Q96ME1 805 aa12.75□□□□□ -0.37
COPB2-208ENST00000512153 KATNBL1Q9H079 304 aa12.75□□□□□ -0.37
COPB2-208ENST00000512153 UBE2ZQ9H832 354 aaPredicted RBP12.75□□□□□ -0.37
COPB2-208ENST00000512153 ACAD9Q9H845 621 aa12.75□□□□□ -0.37
COPB2-208ENST00000512153 SLC38A10Q9HBR0 1119 aa12.75□□□□□ -0.37
COPB2-208ENST00000512153 PDGFCQ9NRA1 345 aa12.75□□□□□ -0.37
COPB2-208ENST00000512153 LMCD1Q9NZU5 365 aa12.75□□□□□ -0.37
COPB2-208ENST00000512153 CLIP2Q9UDT6 1046 aa12.75□□□□□ -0.37
COPB2-208ENST00000512153 FEM1BQ9UK73 627 aa12.75□□□□□ -0.37
COPB2-208ENST00000512153 MTUS1Q9ULD2 1270 aa12.75□□□□□ -0.37
COPB2-208ENST00000512153 NOD1Q9Y239 953 aa12.75□□□□□ -0.37
COPB2-208ENST00000512153 ARHGEF15O94989 841 aa12.74□□□□□ -0.37
COPB2-208ENST00000512153 PTGS1P23219 599 aa12.74□□□□□ -0.37
COPB2-208ENST00000512153 GDPD5Q8WTR4 605 aa12.74□□□□□ -0.37
COPB2-208ENST00000512153 VWCEQ96DN2 955 aa12.74□□□□□ -0.37
COPB2-208ENST00000512153 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.74□□□□□ -0.372e-7■■■□□ 17.6
COPB2-208ENST00000512153 IL1RAPL2Q9NP60 686 aa12.74□□□□□ -0.37
COPB2-208ENST00000512153 POLR3EQ9NVU0 708 aa12.74□□□□□ -0.37
COPB2-208ENST00000512153 NYAP2Q9P242 653 aa12.74□□□□□ -0.37
COPB2-208ENST00000512153 EXOC6BQ9Y2D4 811 aa12.74□□□□□ -0.37
COPB2-208ENST00000512153 Q9Y3F1 56 aa12.74□□□□□ -0.37
COPB2-208ENST00000512153 SLC4A4Q9Y6R1 1079 aa12.74□□□□□ -0.37
COPB2-208ENST00000512153 NAV1Q8NEY1 1877 aa12.74□□□□□ -0.37
COPB2-208ENST00000512153 TCRBV5S4A2TA0A5A2 114 aa12.73□□□□□ -0.37
COPB2-208ENST00000512153 LPXNO60711 386 aa12.73□□□□□ -0.37
COPB2-208ENST00000512153 IQCF3P0C7M6 154 aa12.73□□□□□ -0.37
COPB2-208ENST00000512153 OAZ1P54368 228 aa12.73□□□□□ -0.37
COPB2-208ENST00000512153 CHMP4BP1P59074 171 aa12.73□□□□□ -0.37
COPB2-208ENST00000512153 BFSP2Q13515 415 aa12.73□□□□□ -0.37
COPB2-208ENST00000512153 LEXMQ3ZCV2 418 aa12.73□□□□□ -0.37
COPB2-208ENST00000512153 BRDTQ58F21 947 aaPredicted RBP12.73□□□□□ -0.37
COPB2-208ENST00000512153 PTCRAQ6ISU1 281 aaPredicted RBP12.73□□□□□ -0.37
COPB2-208ENST00000512153 EP400NLQ6ZTU2 488 aa12.73□□□□□ -0.37
COPB2-208ENST00000512153 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.73□□□□□ -0.37
COPB2-208ENST00000512153 FBXO16Q8IX29 292 aaPredicted RBP12.73□□□□□ -0.37
COPB2-208ENST00000512153 FAM133AQ8N9E0 248 aa12.73□□□□□ -0.37
COPB2-208ENST00000512153 KCNH6Q9H252 994 aa12.73□□□□□ -0.37
COPB2-208ENST00000512153 BRWD1Q9NSI6 2320 aa12.73□□□□□ -0.37
COPB2-208ENST00000512153 REV3LO60673 3130 aa12.73□□□□□ -0.37
COPB2-208ENST00000512153 SOWAHBA6NEL2 793 aa12.72□□□□□ -0.37
COPB2-208ENST00000512153 DCXO43602 365 aa12.72□□□□□ -0.37
COPB2-208ENST00000512153 BAIAP3O94812 1187 aa12.72□□□□□ -0.37
COPB2-208ENST00000512153 IFIT2P09913 472 aaKnown RBP12.72□□□□□ -0.37
COPB2-208ENST00000512153 FDX1P10109 184 aa12.72□□□□□ -0.37
COPB2-208ENST00000512153 IL9P15248 144 aa12.72□□□□□ -0.37
COPB2-208ENST00000512153 CPT1AP50416 773 aa12.72□□□□□ -0.37
COPB2-208ENST00000512153 CTR9Q6PD62 1173 aa12.72□□□□□ -0.37
COPB2-208ENST00000512153 CLASRPQ8N2M8 674 aaKnown RBP12.72□□□□□ -0.37
COPB2-208ENST00000512153 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.72□□□□□ -0.37
COPB2-208ENST00000512153 TRERF1Q96PN7 1200 aa12.72□□□□□ -0.37
COPB2-208ENST00000512153 MTG1Q9BT17 334 aaPredicted RBP12.72□□□□□ -0.37
COPB2-208ENST00000512153 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.72□□□□□ -0.37
COPB2-208ENST00000512153 A1CFQ9NQ94 594 aaKnown RBP12.72□□□□□ -0.37
COPB2-208ENST00000512153 RNF146Q9NTX7 359 aa12.72□□□□□ -0.37
COPB2-208ENST00000512153 MCM3APO60318 1980 aa12.72□□□□□ -0.37
COPB2-208ENST00000512153 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.71□□□□□ -0.37
COPB2-208ENST00000512153 MINDY4BA8MYZ0 360 aa12.71□□□□□ -0.37
COPB2-208ENST00000512153 ALAS1P13196 640 aa12.71□□□□□ -0.37
COPB2-208ENST00000512153 ADD2P35612 726 aa12.71□□□□□ -0.37
COPB2-208ENST00000512153 NBPF20Q3BBV1 942 aa12.71□□□□□ -0.37
COPB2-208ENST00000512153 PUS10Q3MIT2 529 aaKnown RBP12.71□□□□□ -0.37
COPB2-208ENST00000512153 SLFNL1Q499Z3 407 aa12.71□□□□□ -0.37
COPB2-208ENST00000512153 HSP90AB4PQ58FF6 505 aa12.71□□□□□ -0.37
COPB2-208ENST00000512153 ZKSCAN2Q63HK3 967 aa12.71□□□□□ -0.37
COPB2-208ENST00000512153 TAPT1Q6NXT6 567 aa12.71□□□□□ -0.37
COPB2-208ENST00000512153 SPRED2Q7Z698 418 aa12.71□□□□□ -0.37
COPB2-208ENST00000512153 FTSJ3Q8IY81 847 aaKnown RBP12.71□□□□□ -0.37
COPB2-208ENST00000512153 ZNF444Q8N0Y2 327 aaPredicted RBP12.71□□□□□ -0.37
COPB2-208ENST00000512153 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.71□□□□□ -0.37
COPB2-208ENST00000512153 TGS1Q96RS0 853 aaKnown RBP12.71□□□□□ -0.37
COPB2-208ENST00000512153 VTA1Q9NP79 307 aa12.71□□□□□ -0.37
COPB2-208ENST00000512153 PAG1Q9NWQ8 432 aa12.71□□□□□ -0.37
COPB2-208ENST00000512153 DDX49Q9Y6V7 483 aaKnown RBP12.71□□□□□ -0.37
COPB2-208ENST00000512153 PARP14Q460N5 1801 aa12.71□□□□□ -0.38
COPB2-208ENST00000512153 MYH8P13535 1937 aa12.7□□□□□ -0.38
COPB2-208ENST00000512153 TRANK1O15050 2925 aa12.7□□□□□ -0.38
COPB2-208ENST00000512153 LCHNA4D1U4 455 aa12.7□□□□□ -0.38
COPB2-208ENST00000512153 TMEM232C9JQI7 657 aa12.7□□□□□ -0.38
COPB2-208ENST00000512153 PITPNM1O00562 1244 aa12.7□□□□□ -0.38
COPB2-208ENST00000512153 BMP3P12645 472 aa12.7□□□□□ -0.38
COPB2-208ENST00000512153 PURAQ00577 322 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms