RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 IGKV6D-41A0A0C4DH26 115 aa9.28□□□□□ -0.92
HTT-209ENST00000512068 PALM3A6NDB9 673 aaPredicted RBP9.28□□□□□ -0.92
HTT-209ENST00000512068 hCG_1984214I3L0E3 225 aa9.28□□□□□ -0.92
HTT-209ENST00000512068 GH2P01242 217 aa9.28□□□□□ -0.92
HTT-209ENST00000512068 GOLGA8HP0CJ92 632 aa9.28□□□□□ -0.92
HTT-209ENST00000512068 PDHBP11177 359 aa9.28□□□□□ -0.92
HTT-209ENST00000512068 JUNDP17535 347 aa9.28□□□□□ -0.92
HTT-209ENST00000512068 SMARCA1P28370 1054 aa9.28□□□□□ -0.92
HTT-209ENST00000512068 SLC1A4P43007 532 aa9.28□□□□□ -0.92
HTT-209ENST00000512068 IKQ13123 557 aaPredicted RBP9.28□□□□□ -0.92
HTT-209ENST00000512068 SEPT2Q15019 361 aa9.28□□□□□ -0.92
HTT-209ENST00000512068 PFKFB3Q16875 520 aaPredicted RBP9.28□□□□□ -0.92
HTT-209ENST00000512068 CAVIN1Q6NZI2 390 aaKnown RBP9.28□□□□□ -0.92
HTT-209ENST00000512068 FAM173BQ6P4H8 233 aa9.28□□□□□ -0.92
HTT-209ENST00000512068 USP17L2Q6R6M4 530 aa9.28□□□□□ -0.92
HTT-209ENST00000512068 LYPD8Q6UX82 237 aa9.28□□□□□ -0.92
HTT-209ENST00000512068 HEATR3Q7Z4Q2 680 aa9.28□□□□□ -0.92
HTT-209ENST00000512068 HOMER1Q86YM7 354 aa9.28□□□□□ -0.92
HTT-209ENST00000512068 FAM177A1Q8N128 213 aaPredicted RBP9.28□□□□□ -0.92
HTT-209ENST00000512068 ZNF713Q8N859 430 aaPredicted RBP9.28□□□□□ -0.92
HTT-209ENST00000512068 KCNG4Q8TDN1 519 aa9.28□□□□□ -0.92
HTT-209ENST00000512068 DCAF4Q8WV16 495 aa9.28□□□□□ -0.92
HTT-209ENST00000512068 ZBED3Q96IU2 234 aaPredicted RBP9.28□□□□□ -0.92
HTT-209ENST00000512068 CHAMP1Q96JM3 812 aa9.28□□□□□ -0.92
HTT-209ENST00000512068 TMEM39BQ9GZU3 492 aa9.28□□□□□ -0.92
HTT-209ENST00000512068 FOXP1Q9H334 677 aaPredicted RBP9.28□□□□□ -0.92
HTT-209ENST00000512068 SH3GLB2Q9NR46 395 aa9.28□□□□□ -0.92
HTT-209ENST00000512068 VPS54Q9P1Q0 977 aa9.28□□□□□ -0.92
HTT-209ENST00000512068 TFIP11Q9UBB9 837 aaKnown RBP9.28□□□□□ -0.92
HTT-209ENST00000512068 HACL1Q9UJ83 578 aa9.28□□□□□ -0.92
HTT-209ENST00000512068 KCNJ14Q9UNX9 436 aa9.28□□□□□ -0.92
HTT-209ENST00000512068 CEP131Q9UPN4 1083 aa9.28□□□□□ -0.92
HTT-209ENST00000512068 CNTNAP1P78357 1384 aa9.27□□□□□ -0.93
HTT-209ENST00000512068 ATAD5Q96QE3 1844 aa9.27□□□□□ -0.93
HTT-209ENST00000512068 hCG_1642624A0A1W2PR95 340 aa9.27□□□□□ -0.93
HTT-209ENST00000512068 USP17L5A8MUK1 530 aa9.27□□□□□ -0.93
HTT-209ENST00000512068 DXOO77932 396 aaKnown RBP9.27□□□□□ -0.93
HTT-209ENST00000512068 YEATS4O95619 227 aa9.27□□□□□ -0.93
HTT-209ENST00000512068 EEF2P13639 858 aaKnown RBP9.27□□□□□ -0.93
HTT-209ENST00000512068 GUCY1A2P33402 732 aa9.27□□□□□ -0.93
HTT-209ENST00000512068 ME1P48163 572 aa9.27□□□□□ -0.93
HTT-209ENST00000512068 NOVP48745 357 aa9.27□□□□□ -0.93
HTT-209ENST00000512068 MMP16P51512 607 aa9.27□□□□□ -0.93
HTT-209ENST00000512068 NAPAP54920 295 aa9.27□□□□□ -0.93
HTT-209ENST00000512068 KCNC4Q03721 635 aa9.27□□□□□ -0.93
HTT-209ENST00000512068 RASA3Q14644 834 aa9.27□□□□□ -0.93
HTT-209ENST00000512068 RILPL1Q5EBL4 403 aa9.27□□□□□ -0.93
HTT-209ENST00000512068 C9orf131Q5VYM1 1079 aa9.27□□□□□ -0.93
HTT-209ENST00000512068 SLFN13Q68D06 897 aa9.27□□□□□ -0.93
HTT-209ENST00000512068 GALNT17Q6IS24 598 aa9.27□□□□□ -0.93
HTT-209ENST00000512068 ILDR2Q71H61 639 aa9.27□□□□□ -0.93
HTT-209ENST00000512068 METTL16Q86W50 562 aaKnown RBP9.27□□□□□ -0.93
HTT-209ENST00000512068 NOSTRINQ8IVI9 506 aa9.27□□□□□ -0.93
HTT-209ENST00000512068 STAG2Q8N3U4 1231 aa9.27□□□□□ -0.93
HTT-209ENST00000512068 LEO1Q8WVC0 666 aaPredicted RBP9.27□□□□□ -0.93
HTT-209ENST00000512068 DNAJC18Q9H819 358 aa9.27□□□□□ -0.93
HTT-209ENST00000512068 VAT1LQ9HCJ6 419 aa9.27□□□□□ -0.93
HTT-209ENST00000512068 GPRC5DQ9NZD1 345 aa9.27□□□□□ -0.93
HTT-209ENST00000512068 SYNPO2Q9UMS6 1093 aa9.27□□□□□ -0.93
HTT-209ENST00000512068 PPP2R3BQ9Y5P8 575 aa9.27□□□□□ -0.93
HTT-209ENST00000512068 SHTN1A0MZ66 631 aa9.26□□□□□ -0.93
HTT-209ENST00000512068 GRIN3BO60391 1043 aa9.26□□□□□ -0.93
HTT-209ENST00000512068 LETM1O95202 739 aaPredicted RBP9.26□□□□□ -0.93
HTT-209ENST00000512068 ASNSP08243 561 aa9.26□□□□□ -0.93
HTT-209ENST00000512068 U2AF2P26368 475 aaKnown RBP eCLIP9.26□□□□□ -0.93
HTT-209ENST00000512068 GNA11P29992 359 aa9.26□□□□□ -0.93
HTT-209ENST00000512068 ZNF543Q08ER8 600 aa9.26□□□□□ -0.93
HTT-209ENST00000512068 PKN1Q16512 942 aa9.26□□□□□ -0.93
HTT-209ENST00000512068 ANO1Q5XXA6 986 aa9.26□□□□□ -0.93
HTT-209ENST00000512068 CCDC73Q6ZRK6 1079 aa9.26□□□□□ -0.93
HTT-209ENST00000512068 MIGA2Q7L4E1 593 aa9.26□□□□□ -0.93
HTT-209ENST00000512068 CLEC10AQ8IUN9 316 aa9.26□□□□□ -0.93
HTT-209ENST00000512068 LRRN4Q8WUT4 740 aa9.26□□□□□ -0.93
HTT-209ENST00000512068 MKL1Q969V6 931 aa9.26□□□□□ -0.93
HTT-209ENST00000512068 USP28Q96RU2 1077 aa9.26□□□□□ -0.93
HTT-209ENST00000512068 FEZ1Q99689 392 aa9.26□□□□□ -0.93
HTT-209ENST00000512068 PHF20Q9BVI0 1012 aa9.26□□□□□ -0.93
HTT-209ENST00000512068 C6orf50Q9HD87 102 aa9.26□□□□□ -0.93
HTT-209ENST00000512068 GJB4Q9NTQ9 266 aa9.26□□□□□ -0.93
HTT-209ENST00000512068 GINM1Q9NU53 330 aa9.26□□□□□ -0.93
HTT-209ENST00000512068 RTEL1Q9NZ71 1219 aa9.26□□□□□ -0.93
HTT-209ENST00000512068 ZBTB21Q9ULJ3 1066 aa9.26□□□□□ -0.93
HTT-209ENST00000512068 CCDC194A0A1B0GVG4 234 aa9.25□□□□□ -0.93
HTT-209ENST00000512068 BTBD18B2RXH4 712 aa9.25□□□□□ -0.93
HTT-209ENST00000512068 KIF28PB7ZC32 967 aa9.25□□□□□ -0.93
HTT-209ENST00000512068 SPTLC2O15270 562 aa9.25□□□□□ -0.93
HTT-209ENST00000512068 GADD45BO75293 160 aaPredicted RBP9.25□□□□□ -0.93
HTT-209ENST00000512068 BMP15O95972 392 aa9.25□□□□□ -0.93
HTT-209ENST00000512068 PRELPP51888 382 aa9.25□□□□□ -0.93
HTT-209ENST00000512068 TRAF1Q13077 416 aa9.25□□□□□ -0.93
HTT-209ENST00000512068 PTPRNQ16849 979 aa9.25□□□□□ -0.93
HTT-209ENST00000512068 CCDC183Q5T5S1 534 aa9.25□□□□□ -0.93
HTT-209ENST00000512068 ANGEL2Q5VTE6 544 aaKnown RBP9.25□□□□□ -0.93
HTT-209ENST00000512068 GMCL1P1Q8NEA9 526 aa9.25□□□□□ -0.93
HTT-209ENST00000512068 GPT2Q8TD30 523 aa9.25□□□□□ -0.93
HTT-209ENST00000512068 GPKOWQ92917 476 aaPredicted RBP eCLIP9.25□□□□□ -0.93
HTT-209ENST00000512068 DCPSQ96C86 337 aaKnown RBP9.25□□□□□ -0.93
HTT-209ENST00000512068 ZNF341Q9BYN7 854 aa9.25□□□□□ -0.93
HTT-209ENST00000512068 UBA5Q9GZZ9 404 aa9.25□□□□□ -0.93
HTT-209ENST00000512068 DEFB129Q9H1M3 183 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms