RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 LINC00301Q8NCQ3 95 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 SLC30A5Q8TAD4 765 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 ANKRD24Q8TF21 1146 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 COL26A1Q96A83 441 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 MRFAP1L1Q96HT8 127 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 C8orf37Q96NL8 207 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 SIGLEC11Q96RL6 698 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 FEZ1Q99689 392 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 SCAND2PQ9GZW5 306 aaPredicted RBP1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 TRPV6Q9H1D0 765 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 TTC12Q9H892 705 aaPredicted RBP1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 ZBTB4Q9P1Z0 1013 aaPredicted RBP1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 PRKAG3Q9UGI9 489 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 FBXO2Q9UK22 296 aaPredicted RBP1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 PCDHGB4Q9UN71 923 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 SIK3Q9Y2K2 1263 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 PCDHGB5Q9Y5G0 923 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 TMEM232C9JQI7 657 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 RIOK3O14730 519 aaKnown RBP1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 GABBR2O75899 941 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 XKR5Q6UX68 686 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 SESTD1Q86VW0 696 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 SP8Q8IXZ3 490 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 AENQ8WTP8 325 aaKnown RBP1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 HDAC7Q8WUI4 952 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 DACH2Q96NX9 599 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 LACRTQ9GZZ8 138 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 ZDHHC18Q9NUE0 388 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 PSD3Q9NYI0 1048 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 NEU3Q9UQ49 428 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 CTDP1Q9Y5B0 961 aaPredicted RBP1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 CAPN6Q9Y6Q1 641 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 CCDC88CQ9P219 2028 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 SPTA1P02549 2419 aa1.95□□□□□ -2.1
TRAPPC13-211ENST00000512009 VPS13DQ5THJ4 4388 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 CNTNAP2Q9UHC6 1331 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 A0A0B4J269 797 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 A0A1B0GTH6 734 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 YDJCA8MPS7 323 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 TMEM229AB2RXF0 380 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 CTAGE5O15320 804 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 ZEB2O60315 1214 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 KDM4AO75164 1064 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 TPM3P06753 285 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 CHRNB2P17787 502 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 TNK2Q07912 1038 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 TUBB3Q13509 450 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 EIF4EBP2Q13542 120 aaPredicted RBP1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 Q3C1V9 767 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 DPCR1Q3MIW9 517 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 FBXO46Q6PJ61 603 aaPredicted RBP1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 SEZ6L2Q6UXD5 910 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 GMCL1P1Q8NEA9 526 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 PPIL4Q8WUA2 492 aaKnown RBP eCLIP1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 CCDC97Q96F63 343 aaPredicted RBP1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 TRAK1Q9UPV9 953 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 ARID1AO14497 2285 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 MYO18BQ8IUG5 2567 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 ITPR2Q14571 2701 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 GPR75-ASB3A0A0A6YYF3 556 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 CHGAP10645 457 aaKnown RBP1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 TDGF1P13385 188 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 PDIA4P13667 645 aaKnown RBP1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 GRIA2P42262 883 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 KCNJ4P48050 445 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 BTKQ06187 659 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 FAM98CQ17RN3 349 aaKnown RBP1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 CCDC96Q2M329 555 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 ZC3H12AQ5D1E8 599 aaKnown RBP1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 WDR93Q6P2C0 686 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 FOXR2Q6PJQ5 311 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 TRAF7Q6Q0C0 670 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 EPM2AIP1Q7L775 607 aaPredicted RBP1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 TBC1D10CQ8IV04 446 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 LRRC8AQ8IWT6 810 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 HMGCLL1Q8TB92 370 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 ZCRB1Q8TBF4 217 aaKnown RBP1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 ANKS1AQ92625 1134 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 GCC1Q96CN9 775 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 P2RY11Q96G91 374 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 ABHD8Q96I13 439 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 CTAGE1Q96RT6 745 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 IL17RBQ9NRM6 502 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 DKK4Q9UBT3 224 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 ADD3Q9UEY8 706 aaKnown RBP1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 TCEAL9Q9UHQ7 104 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 ASB3Q9Y575 518 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 NSD1Q96L73 2696 aaPredicted RBP1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 ABCA12Q86UK0 2595 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 PTPRZ1P23471 2315 aaPredicted RBP1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 NEURL1BA8MQ27 555 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 DNM1LO00429 736 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 MARCH6O60337 910 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 GPR37L1O60883 481 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 TRIM21P19474 475 aaKnown RBP1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 NUMBP49757 651 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 HERVK_113P62684 666 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 XPCQ01831 940 aaPredicted RBP1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 MORC3Q14149 939 aa1.94□□□□□ -2.1
TRAPPC13-211ENST00000512009 BMS1Q14692 1282 aaKnown RBP1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms