RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 C11orf49Q9H6J7 331 aa18.84■□□□□ 0.61
PDLIM5-216ENST00000511767 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.84■□□□□ 0.61
PDLIM5-216ENST00000511767 CNPY2Q9Y2B0 182 aa18.84■□□□□ 0.61
PDLIM5-216ENST00000511767 PFASO15067 1338 aa18.83■□□□□ 0.61
PDLIM5-216ENST00000511767 NFIBO00712 420 aa18.83■□□□□ 0.6
PDLIM5-216ENST00000511767 MCM5P33992 734 aa18.83■□□□□ 0.6
PDLIM5-216ENST00000511767 ACVR2BQ13705 512 aa18.83■□□□□ 0.6
PDLIM5-216ENST00000511767 GRM4Q14833 912 aa18.83■□□□□ 0.6
PDLIM5-216ENST00000511767 SART3Q15020 963 aaKnown RBP18.83■□□□□ 0.6
PDLIM5-216ENST00000511767 SLC35G1Q2M3R5 365 aa18.83■□□□□ 0.6
PDLIM5-216ENST00000511767 NSMFQ6X4W1 530 aa18.83■□□□□ 0.6
PDLIM5-216ENST00000511767 CCDC144CPQ8IYA2 1237 aa18.83■□□□□ 0.6
PDLIM5-216ENST00000511767 TBC1D5Q92609 795 aa18.83■□□□□ 0.6
PDLIM5-216ENST00000511767 MTMR8Q96EF0 704 aa18.83■□□□□ 0.6
PDLIM5-216ENST00000511767 KATNBL1Q9H079 304 aa18.83■□□□□ 0.6
PDLIM5-216ENST00000511767 ABHD16BQ9H3Z7 469 aa18.83■□□□□ 0.6
PDLIM5-216ENST00000511767 ASTN1O14525 1302 aa18.82■□□□□ 0.6
PDLIM5-216ENST00000511767 H0YGN5 161 aa18.82■□□□□ 0.6
PDLIM5-216ENST00000511767 PRC1O43663 620 aa18.82■□□□□ 0.6
PDLIM5-216ENST00000511767 ARMCX2Q7L311 632 aa18.82■□□□□ 0.6
PDLIM5-216ENST00000511767 TMTC2Q8N394 836 aa18.82■□□□□ 0.6
PDLIM5-216ENST00000511767 KCNB2Q92953 911 aa18.82■□□□□ 0.6
PDLIM5-216ENST00000511767 RIOX1Q9H6W3 641 aa18.82■□□□□ 0.6
PDLIM5-216ENST00000511767 LY9Q9HBG7 655 aa18.82■□□□□ 0.6
PDLIM5-216ENST00000511767 ASB14A6NK59 587 aa18.81■□□□□ 0.6
PDLIM5-216ENST00000511767 EXOSC10Q01780 885 aaKnown RBP18.81■□□□□ 0.6
PDLIM5-216ENST00000511767 CDC37Q16543 378 aaPredicted RBP18.81■□□□□ 0.6
PDLIM5-216ENST00000511767 QRICH1Q2TAL8 776 aa18.81■□□□□ 0.6
PDLIM5-216ENST00000511767 GJC2Q5T442 439 aaPredicted RBP18.81■□□□□ 0.6
PDLIM5-216ENST00000511767 RNF20Q5VTR2 975 aa18.81■□□□□ 0.6
PDLIM5-216ENST00000511767 MORC4Q8TE76 937 aa18.81■□□□□ 0.6
PDLIM5-216ENST00000511767 TMEM87BQ96K49 555 aa18.81■□□□□ 0.6
PDLIM5-216ENST00000511767 FAM184BQ9ULE4 1060 aa18.81■□□□□ 0.6
PDLIM5-216ENST00000511767 PLXNA1Q9UIW2 1896 aa18.81■□□□□ 0.6
PDLIM5-216ENST00000511767 DNM1LO00429 736 aa18.8■□□□□ 0.6
PDLIM5-216ENST00000511767 RARBP10826 455 aa18.8■□□□□ 0.6
PDLIM5-216ENST00000511767 AKR1A1P14550 325 aa18.8■□□□□ 0.6
PDLIM5-216ENST00000511767 LIFRP42702 1097 aa18.8■□□□□ 0.6
PDLIM5-216ENST00000511767 RPS6P62753 249 aaKnown RBP18.8■□□□□ 0.6
PDLIM5-216ENST00000511767 LRRC41Q15345 812 aa18.8■□□□□ 0.6
PDLIM5-216ENST00000511767 RNF207Q6ZRF8 634 aa18.8■□□□□ 0.6
PDLIM5-216ENST00000511767 CATIPQ7Z7H3 387 aa18.8■□□□□ 0.6
PDLIM5-216ENST00000511767 NEK1Q96PY6 1258 aa18.8■□□□□ 0.6
PDLIM5-216ENST00000511767 MAP3K14Q99558 947 aa18.8■□□□□ 0.6
PDLIM5-216ENST00000511767 SENP6Q9GZR1 1112 aaPredicted RBP18.8■□□□□ 0.6
PDLIM5-216ENST00000511767 MAF1Q9H063 256 aa18.8■□□□□ 0.6
PDLIM5-216ENST00000511767 NR2E3Q9Y5X4 410 aa18.8■□□□□ 0.6
PDLIM5-216ENST00000511767 DDX49Q9Y6V7 483 aaKnown RBP18.8■□□□□ 0.6
PDLIM5-216ENST00000511767 SH2B2O14492 632 aaPredicted RBP18.79■□□□□ 0.6
PDLIM5-216ENST00000511767 CYTH3O43739 400 aa18.79■□□□□ 0.6
PDLIM5-216ENST00000511767 EVI5O60447 810 aa18.79■□□□□ 0.6
PDLIM5-216ENST00000511767 CCDC144BQ3MJ40 725 aa18.79■□□□□ 0.6
PDLIM5-216ENST00000511767 USH1GQ495M9 461 aa18.79■□□□□ 0.6
PDLIM5-216ENST00000511767 FBXO11Q86XK2 927 aa18.79■□□□□ 0.6
PDLIM5-216ENST00000511767 BAZ2BQ9UIF8 2168 aaKnown RBP18.79■□□□□ 0.6
PDLIM5-216ENST00000511767 PTPDC1A2A3K4 754 aa18.78■□□□□ 0.6
PDLIM5-216ENST00000511767 DHX16O60231 1041 aaKnown RBP18.78■□□□□ 0.6
PDLIM5-216ENST00000511767 DUSP11O75319 330 aaKnown RBP18.78■□□□□ 0.6
PDLIM5-216ENST00000511767 PGK1P00558 417 aa18.78■□□□□ 0.6
PDLIM5-216ENST00000511767 ADCK5Q3MIX3 580 aa18.78■□□□□ 0.6
PDLIM5-216ENST00000511767 TAPT1Q6NXT6 567 aa18.78■□□□□ 0.6
PDLIM5-216ENST00000511767 DHX32Q7L7V1 743 aaKnown RBP18.78■□□□□ 0.6
PDLIM5-216ENST00000511767 ZNF654Q8IZM8 581 aa18.78■□□□□ 0.6
PDLIM5-216ENST00000511767 LRRC2Q9BYS8 371 aa18.78■□□□□ 0.6
PDLIM5-216ENST00000511767 XPNPEP3Q9NQH7 507 aa18.78■□□□□ 0.6
PDLIM5-216ENST00000511767 ADD3Q9UEY8 706 aaKnown RBP18.78■□□□□ 0.6
PDLIM5-216ENST00000511767 ZHX1Q9UKY1 873 aaPredicted RBP18.78■□□□□ 0.6
PDLIM5-216ENST00000511767 ABCB11O95342 1321 aa18.77■□□□□ 0.6
PDLIM5-216ENST00000511767 LOC102724159A0A0B4J2E5 919 aa18.77■□□□□ 0.6
PDLIM5-216ENST00000511767 ZBTB5O15062 677 aa18.77■□□□□ 0.6
PDLIM5-216ENST00000511767 ADCY6O43306 1168 aa18.77■□□□□ 0.6
PDLIM5-216ENST00000511767 PPP1R11O60927 126 aaPredicted RBP18.77■□□□□ 0.6
PDLIM5-216ENST00000511767 ADAMTS4O75173 837 aa18.77■□□□□ 0.6
PDLIM5-216ENST00000511767 CALML3P27482 149 aa18.77■□□□□ 0.6
PDLIM5-216ENST00000511767 SMARCA1P28370 1054 aa18.77■□□□□ 0.6
PDLIM5-216ENST00000511767 HSPA4P34932 840 aa18.77■□□□□ 0.6
PDLIM5-216ENST00000511767 PWP2Q15269 919 aaKnown RBP18.77■□□□□ 0.6
PDLIM5-216ENST00000511767 KLHDC9Q8NEP7 349 aa18.77■□□□□ 0.6
PDLIM5-216ENST00000511767 NUP133Q8WUM0 1156 aa18.77■□□□□ 0.6
PDLIM5-216ENST00000511767 PIGSQ96S52 555 aa18.77■□□□□ 0.6
PDLIM5-216ENST00000511767 AMNQ9BXJ7 453 aa18.77■□□□□ 0.6
PDLIM5-216ENST00000511767 PDGFCQ9NRA1 345 aa18.77■□□□□ 0.6
PDLIM5-216ENST00000511767 MRPL11Q9Y3B7 192 aaKnown RBP18.77■□□□□ 0.6
PDLIM5-216ENST00000511767 ADCYAP1R1P41586 468 aa18.76■□□□□ 0.59
PDLIM5-216ENST00000511767 LRRC26Q2I0M4 334 aa18.76■□□□□ 0.59
PDLIM5-216ENST00000511767 IQSEC1Q6DN90 963 aa18.76■□□□□ 0.59
PDLIM5-216ENST00000511767 CCSAPQ6IQ19 270 aaPredicted RBP18.76■□□□□ 0.59
PDLIM5-216ENST00000511767 SLC30A10Q6XR72 485 aa18.76■□□□□ 0.59
PDLIM5-216ENST00000511767 SGMS1Q86VZ5 419 aa18.76■□□□□ 0.59
PDLIM5-216ENST00000511767 SYTL5Q8TDW5 730 aaPredicted RBP18.76■□□□□ 0.59
PDLIM5-216ENST00000511767 LENG1Q96BZ8 264 aaPredicted RBP18.76■□□□□ 0.59
PDLIM5-216ENST00000511767 MYL10Q9BUA6 226 aa18.76■□□□□ 0.59
PDLIM5-216ENST00000511767 PNMA6FA0A0J9YX94 578 aa18.75■□□□□ 0.59
PDLIM5-216ENST00000511767 CCDC69A6NI79 296 aa18.75■□□□□ 0.59
PDLIM5-216ENST00000511767 OPLAHO14841 1288 aa18.75■□□□□ 0.59
PDLIM5-216ENST00000511767 DDAH1O94760 285 aa18.75■□□□□ 0.59
PDLIM5-216ENST00000511767 MYCNP04198 464 aaPredicted RBP18.75■□□□□ 0.59
PDLIM5-216ENST00000511767 ALDH5A1P51649 535 aaPredicted RBP18.75■□□□□ 0.59
PDLIM5-216ENST00000511767 NKX3-2P78367 333 aa18.75■□□□□ 0.59
PDLIM5-216ENST00000511767 KRT32Q14532 448 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms