RNA–Protein interactions for RNA: ENST00000509994.2

SCARB2-204, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-204ENST00000509994 C9orf50Q5SZB4 431 aa11.93□□□□□ -0.5
SCARB2-204ENST00000509994 AKNAD1Q5T1N1 836 aa11.93□□□□□ -0.5
SCARB2-204ENST00000509994 C1orf53Q5VUE5 145 aa11.93□□□□□ -0.5
SCARB2-204ENST00000509994 TTBK2Q6IQ55 1244 aa11.93□□□□□ -0.5
SCARB2-204ENST00000509994 CWC27Q6UX04 472 aaKnown RBP11.93□□□□□ -0.5
SCARB2-204ENST00000509994 EXOC6Q8TAG9 804 aa11.93□□□□□ -0.5
SCARB2-204ENST00000509994 RNPC3Q96LT9 517 aaKnown RBP11.93□□□□□ -0.5
SCARB2-204ENST00000509994 TMEM47Q9BQJ4 181 aa11.93□□□□□ -0.5
SCARB2-204ENST00000509994 ZNF536O15090 1300 aa11.92□□□□□ -0.5
SCARB2-204ENST00000509994 LCTP09848 1927 aa11.92□□□□□ -0.5
SCARB2-204ENST00000509994 A0A0U1RQG5 324 aaPredicted RBP11.92□□□□□ -0.5
SCARB2-204ENST00000509994 HIP1O00291 1037 aa11.92□□□□□ -0.5
SCARB2-204ENST00000509994 ZNF213O14771 459 aa11.92□□□□□ -0.5
SCARB2-204ENST00000509994 TLR3O15455 904 aaKnown RBP11.92□□□□□ -0.5
SCARB2-204ENST00000509994 DHX16O60231 1041 aaKnown RBP11.92□□□□□ -0.5
SCARB2-204ENST00000509994 ZEB2O60315 1214 aa11.92□□□□□ -0.5
SCARB2-204ENST00000509994 PLA2G6O60733 806 aa11.92□□□□□ -0.5
SCARB2-204ENST00000509994 ICAM1P05362 532 aa11.92□□□□□ -0.5
SCARB2-204ENST00000509994 SDSP20132 328 aa11.92□□□□□ -0.5
SCARB2-204ENST00000509994 IRX5P78411 483 aaPredicted RBP11.92□□□□□ -0.5
SCARB2-204ENST00000509994 BEX3Q00994 111 aa11.92□□□□□ -0.5
SCARB2-204ENST00000509994 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.92□□□□□ -0.5
SCARB2-204ENST00000509994 TLK2Q86UE8 772 aa11.92□□□□□ -0.5
SCARB2-204ENST00000509994 FBXO16Q8IX29 292 aaPredicted RBP11.92□□□□□ -0.5
SCARB2-204ENST00000509994 FAM133AQ8N9E0 248 aa11.92□□□□□ -0.5
SCARB2-204ENST00000509994 ESR2Q92731 530 aa11.92□□□□□ -0.5
SCARB2-204ENST00000509994 FGD4Q96M96 766 aa11.92□□□□□ -0.5
SCARB2-204ENST00000509994 ZKSCAN3Q9BRR0 538 aa11.92□□□□□ -0.5
SCARB2-204ENST00000509994 MTMR10Q9NXD2 777 aa11.92□□□□□ -0.5
SCARB2-204ENST00000509994 CYP39A1Q9NYL5 469 aa11.92□□□□□ -0.5
SCARB2-204ENST00000509994 ZMYM6O95789 1325 aa11.91□□□□□ -0.5
SCARB2-204ENST00000509994 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.91□□□□□ -0.5
SCARB2-204ENST00000509994 SOWAHBA6NEL2 793 aa11.91□□□□□ -0.5
SCARB2-204ENST00000509994 ADCY6O43306 1168 aa11.91□□□□□ -0.5
SCARB2-204ENST00000509994 PCP11498 1178 aaKnown RBP11.91□□□□□ -0.5
SCARB2-204ENST00000509994 CALML3P27482 149 aa11.91□□□□□ -0.5
SCARB2-204ENST00000509994 GJA9P57773 515 aa11.91□□□□□ -0.5
SCARB2-204ENST00000509994 NUCB1Q02818 461 aa11.91□□□□□ -0.5
SCARB2-204ENST00000509994 USH1GQ495M9 461 aa11.91□□□□□ -0.5
SCARB2-204ENST00000509994 IQCA1Q86XH1 822 aa11.91□□□□□ -0.5
SCARB2-204ENST00000509994 TICAM2Q86XR7 235 aa11.91□□□□□ -0.5
SCARB2-204ENST00000509994 TBC1D10CQ8IV04 446 aa11.91□□□□□ -0.5
SCARB2-204ENST00000509994 SMC5Q8IY18 1101 aa11.91□□□□□ -0.5
SCARB2-204ENST00000509994 KLHDC9Q8NEP7 349 aa11.91□□□□□ -0.5
SCARB2-204ENST00000509994 MPHOSPH6Q99547 160 aaKnown RBP11.91□□□□□ -0.5
SCARB2-204ENST00000509994 ADD3Q9UEY8 706 aaKnown RBP11.91□□□□□ -0.5
SCARB2-204ENST00000509994 STXBP5LQ9Y2K9 1186 aa11.91□□□□□ -0.5
SCARB2-204ENST00000509994 DDX49Q9Y6V7 483 aaKnown RBP11.91□□□□□ -0.5
SCARB2-204ENST00000509994 ELP1O95163 1332 aa11.9□□□□□ -0.5
SCARB2-204ENST00000509994 NEDD4P46934 1319 aa11.9□□□□□ -0.5
SCARB2-204ENST00000509994 KIAA0355O15063 1070 aa11.9□□□□□ -0.5
SCARB2-204ENST00000509994 DYNC1LI2O43237 492 aaPredicted RBP11.9□□□□□ -0.5
SCARB2-204ENST00000509994 IGHDP01880 384 aa11.9□□□□□ -0.5
SCARB2-204ENST00000509994 PDHBP11177 359 aa11.9□□□□□ -0.5
SCARB2-204ENST00000509994 CST5P28325 142 aaPredicted RBP11.9□□□□□ -0.5
SCARB2-204ENST00000509994 FAAP100Q0VG06 881 aa11.9□□□□□ -0.5
SCARB2-204ENST00000509994 BAATQ14032 418 aaPredicted RBP11.9□□□□□ -0.5
SCARB2-204ENST00000509994 FSCN1Q16658 493 aaKnown RBP11.9□□□□□ -0.5
SCARB2-204ENST00000509994 KIAA1211Q6ZU35 1233 aa11.9□□□□□ -0.5
SCARB2-204ENST00000509994 PLEKHM2Q8IWE5 1019 aa11.9□□□□□ -0.5
SCARB2-204ENST00000509994 PPP1R12CQ9BZL4 782 aa11.9□□□□□ -0.5
SCARB2-204ENST00000509994 UPF3AQ9H1J1 476 aaKnown RBP11.9□□□□□ -0.5
SCARB2-204ENST00000509994 RANBP17Q9H2T7 1088 aaKnown RBP11.9□□□□□ -0.5
SCARB2-204ENST00000509994 KAT14Q9H8E8 782 aa11.9□□□□□ -0.5
SCARB2-204ENST00000509994 ARVCFO00192 962 aa11.89□□□□□ -0.51
SCARB2-204ENST00000509994 NFIBO00712 420 aa11.89□□□□□ -0.51
SCARB2-204ENST00000509994 KDM4AO75164 1064 aa11.89□□□□□ -0.51
SCARB2-204ENST00000509994 GOLGA8HP0CJ92 632 aa11.89□□□□□ -0.51
SCARB2-204ENST00000509994 ITGB8P26012 769 aa11.89□□□□□ -0.51
SCARB2-204ENST00000509994 PDE4DQ08499 809 aa11.89□□□□□ -0.51
SCARB2-204ENST00000509994 IMMTQ16891 758 aaKnown RBP11.89□□□□□ -0.51
SCARB2-204ENST00000509994 CXCL17Q6UXB2 119 aa11.89□□□□□ -0.51
SCARB2-204ENST00000509994 SLC30A10Q6XR72 485 aa11.89□□□□□ -0.51
SCARB2-204ENST00000509994 RNF207Q6ZRF8 634 aa11.89□□□□□ -0.51
SCARB2-204ENST00000509994 ANKRD33Q7Z3H0 272 aa11.89□□□□□ -0.51
SCARB2-204ENST00000509994 TTC14Q96N46 770 aa11.89□□□□□ -0.51
SCARB2-204ENST00000509994 TOX2Q96NM4 488 aa11.89□□□□□ -0.51
SCARB2-204ENST00000509994 PURBQ96QR8 312 aaKnown RBP11.89□□□□□ -0.51
SCARB2-204ENST00000509994 UBAC1Q9BSL1 405 aa11.89□□□□□ -0.51
SCARB2-204ENST00000509994 VTA1Q9NP79 307 aa11.89□□□□□ -0.51
SCARB2-204ENST00000509994 PDGFCQ9NRA1 345 aa11.89□□□□□ -0.51
SCARB2-204ENST00000509994 TCP11L1Q9NUJ3 509 aa11.89□□□□□ -0.51
SCARB2-204ENST00000509994 PNMA2Q9UL42 364 aa11.89□□□□□ -0.51
SCARB2-204ENST00000509994 B4DLN1 442 aa11.88□□□□□ -0.51
SCARB2-204ENST00000509994 B4E1Z4 1266 aa11.88□□□□□ -0.51
SCARB2-204ENST00000509994 TIMP1P01033 207 aa11.88□□□□□ -0.51
SCARB2-204ENST00000509994 FGRP09769 529 aa11.88□□□□□ -0.51
SCARB2-204ENST00000509994 SMPD1P17405 629 aa11.88□□□□□ -0.51
SCARB2-204ENST00000509994 PTGS1P23219 599 aa11.88□□□□□ -0.51
SCARB2-204ENST00000509994 ALDH5A1P51649 535 aaPredicted RBP11.88□□□□□ -0.51
SCARB2-204ENST00000509994 MRPL12P52815 198 aaKnown RBP11.88□□□□□ -0.51
SCARB2-204ENST00000509994 CHMP4BP1P59074 171 aa11.88□□□□□ -0.51
SCARB2-204ENST00000509994 ZNF543Q08ER8 600 aa11.88□□□□□ -0.51
SCARB2-204ENST00000509994 PPIGQ13427 754 aaKnown RBP eCLIP11.88□□□□□ -0.51
SCARB2-204ENST00000509994 CCDC178Q5BJE1 867 aa11.88□□□□□ -0.51
SCARB2-204ENST00000509994 IQSEC1Q6DN90 963 aa11.88□□□□□ -0.51
SCARB2-204ENST00000509994 CCSAPQ6IQ19 270 aaPredicted RBP11.88□□□□□ -0.51
SCARB2-204ENST00000509994 BTNL9Q6UXG8 535 aa11.88□□□□□ -0.51
SCARB2-204ENST00000509994 TMEM199Q8N511 208 aa11.88□□□□□ -0.51
SCARB2-204ENST00000509994 PNMA1Q8ND90 353 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms