RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 BCS1LQ9Y276 419 aa16.84■□□□□ 0.29
PHF3-209ENST00000509330 EGFRP00533 1210 aa16.84■□□□□ 0.29
PHF3-209ENST00000509330 CXCL9Q07325 125 aa16.84■□□□□ 0.29
PHF3-209ENST00000509330 CDC37Q16543 378 aaPredicted RBP16.84■□□□□ 0.29
PHF3-209ENST00000509330 GPATCH4Q5T3I0 446 aaKnown RBP16.84■□□□□ 0.29
PHF3-209ENST00000509330 ARL6IP4Q66PJ3 421 aaKnown RBP16.84■□□□□ 0.29
PHF3-209ENST00000509330 TATDN1Q6P1N9 297 aa16.84■□□□□ 0.29
PHF3-209ENST00000509330 TMEM179Q6ZVK1 233 aa16.84■□□□□ 0.29
PHF3-209ENST00000509330 SH3RF1Q7Z6J0 888 aa16.84■□□□□ 0.29
PHF3-209ENST00000509330 ACER1Q8TDN7 264 aa16.84■□□□□ 0.29
PHF3-209ENST00000509330 MRIQ9BWK5 157 aa16.84■□□□□ 0.29
PHF3-209ENST00000509330 PIM2Q9P1W9 311 aa16.84■□□□□ 0.29
PHF3-209ENST00000509330 GDAQ9Y2T3 454 aa16.84■□□□□ 0.29
PHF3-209ENST00000509330 PCDHA1Q9Y5I3 950 aa16.84■□□□□ 0.29
PHF3-209ENST00000509330 CDC25BP30305 580 aa16.83■□□□□ 0.29
PHF3-209ENST00000509330 NT5DC1Q5TFE4 455 aa16.83■□□□□ 0.29
PHF3-209ENST00000509330 HDAC9Q9UKV0 1011 aa16.83■□□□□ 0.29
PHF3-209ENST00000509330 CTNND2Q9UQB3 1225 aa16.83■□□□□ 0.29
PHF3-209ENST00000509330 POTEMA6NI47 508 aa16.83■□□□□ 0.28
PHF3-209ENST00000509330 SIPA1L1O43166 1804 aa16.83■□□□□ 0.28
PHF3-209ENST00000509330 NAALADL2Q58DX5 795 aa16.83■□□□□ 0.28
PHF3-209ENST00000509330 EEF2KMTQ96G04 330 aa16.83■□□□□ 0.28
PHF3-209ENST00000509330 PSMD1Q99460 953 aa16.83■□□□□ 0.28
PHF3-209ENST00000509330 PSTPIP2Q9H939 334 aa16.83■□□□□ 0.28
PHF3-209ENST00000509330 MYH4Q9Y623 1939 aa16.83■□□□□ 0.28
PHF3-209ENST00000509330 MYO3BQ8WXR4 1341 aa16.83■□□□□ 0.28
PHF3-209ENST00000509330 PSDA5PKW4 1024 aaPredicted RBP16.83■□□□□ 0.28
PHF3-209ENST00000509330 TPM3P06753 285 aa16.83■□□□□ 0.28
PHF3-209ENST00000509330 VIL1P09327 827 aaKnown RBP16.83■□□□□ 0.28
PHF3-209ENST00000509330 MLKLQ8NB16 471 aa16.83■□□□□ 0.28
PHF3-209ENST00000509330 C16orf45Q96MC5 204 aaPredicted RBP16.83■□□□□ 0.28
PHF3-209ENST00000509330 TRMT1Q9NXH9 659 aaKnown RBP16.83■□□□□ 0.28
PHF3-209ENST00000509330 SKILP12757 684 aa16.82■□□□□ 0.28
PHF3-209ENST00000509330 PLCG1P19174 1290 aa16.82■□□□□ 0.28
PHF3-209ENST00000509330 CABP7Q86V35 215 aa16.82■□□□□ 0.28
PHF3-209ENST00000509330 ZNRF3Q9ULT6 936 aa16.82■□□□□ 0.28
PHF3-209ENST00000509330 RGPD3A6NKT7 1758 aaPredicted RBP16.82■□□□□ 0.28
PHF3-209ENST00000509330 RGPD4Q7Z3J3 1758 aa16.82■□□□□ 0.28
PHF3-209ENST00000509330 CALCRLQ16602 461 aa16.82■□□□□ 0.28
PHF3-209ENST00000509330 SPATA20Q8TB22 786 aa16.82■□□□□ 0.28
PHF3-209ENST00000509330 EDIL3O43854 480 aa16.81■□□□□ 0.28
PHF3-209ENST00000509330 MARCH6O60337 910 aa16.81■□□□□ 0.28
PHF3-209ENST00000509330 ENTPD3O75355 529 aa16.81■□□□□ 0.28
PHF3-209ENST00000509330 SMARCA1P28370 1054 aa16.81■□□□□ 0.28
PHF3-209ENST00000509330 KIAA1755Q5JYT7 1200 aa16.81■□□□□ 0.28
PHF3-209ENST00000509330 CUL5Q93034 780 aa16.81■□□□□ 0.28
PHF3-209ENST00000509330 NYAP2Q9P242 653 aa16.81■□□□□ 0.28
PHF3-209ENST00000509330 SYNRGQ9UMZ2 1314 aa16.81■□□□□ 0.28
PHF3-209ENST00000509330 USP27XA6NNY8 438 aa16.81■□□□□ 0.28
PHF3-209ENST00000509330 DALRD3Q5D0E6 543 aaKnown RBP16.81■□□□□ 0.28
PHF3-209ENST00000509330 GMLQ99445 158 aa16.81■□□□□ 0.28
PHF3-209ENST00000509330 GLIS2Q9BZE0 524 aaPredicted RBP16.81■□□□□ 0.28
PHF3-209ENST00000509330 RASSF7Q02833 373 aa16.8■□□□□ 0.28
PHF3-209ENST00000509330 ARMCX5Q6P1M9 558 aa16.8■□□□□ 0.28
PHF3-209ENST00000509330 INTS13Q9NVM9 706 aa16.8■□□□□ 0.28
PHF3-209ENST00000509330 DACH1Q9UI36 760 aa16.8■□□□□ 0.28
PHF3-209ENST00000509330 GJA3Q9Y6H8 435 aa16.8■□□□□ 0.28
PHF3-209ENST00000509330 RPN1P04843 607 aaKnown RBP16.8■□□□□ 0.28
PHF3-209ENST00000509330 HOXA13P31271 388 aaPredicted RBP16.8■□□□□ 0.28
PHF3-209ENST00000509330 TPD52L1Q16890 204 aaPredicted RBP16.8■□□□□ 0.28
PHF3-209ENST00000509330 JDP2Q8WYK2 163 aa16.8■□□□□ 0.28
PHF3-209ENST00000509330 TAOK3Q9H2K8 898 aa16.8■□□□□ 0.28
PHF3-209ENST00000509330 RIC8AQ9NPQ8 531 aa16.8■□□□□ 0.28
PHF3-209ENST00000509330 ASTN2O75129 1339 aaPredicted RBP16.8■□□□□ 0.28
PHF3-209ENST00000509330 POLD1P28340 1107 aa16.8■□□□□ 0.28
PHF3-209ENST00000509330 ELOA2Q8IYF1 753 aaPredicted RBP16.8■□□□□ 0.28
PHF3-209ENST00000509330 HPS3Q969F9 1004 aa16.8■□□□□ 0.28
PHF3-209ENST00000509330 ESYT2A0FGR8 921 aa16.79■□□□□ 0.28
PHF3-209ENST00000509330 WNT10BO00744 389 aa16.79■□□□□ 0.28
PHF3-209ENST00000509330 TRIML1Q8N9V2 468 aa16.79■□□□□ 0.28
PHF3-209ENST00000509330 ZFP91Q96JP5 570 aaPredicted RBP16.79■□□□□ 0.28
PHF3-209ENST00000509330 GSDMAQ96QA5 445 aa16.79■□□□□ 0.28
PHF3-209ENST00000509330 NUDT12Q9BQG2 462 aa16.79■□□□□ 0.28
PHF3-209ENST00000509330 CNTNAP1P78357 1384 aa16.79■□□□□ 0.28
PHF3-209ENST00000509330 TRIM49BA6NDI0 452 aa16.79■□□□□ 0.28
PHF3-209ENST00000509330 PPP1R3GB7ZBB8 358 aa16.79■□□□□ 0.28
PHF3-209ENST00000509330 GTPBP6O43824 516 aaPredicted RBP16.79■□□□□ 0.28
PHF3-209ENST00000509330 BMP3P12645 472 aa16.79■□□□□ 0.28
PHF3-209ENST00000509330 DGKZQ13574 1117 aa16.79■□□□□ 0.28
PHF3-209ENST00000509330 FAM83BQ5T0W9 1011 aa16.79■□□□□ 0.28
PHF3-209ENST00000509330 CCDC174Q6PII3 467 aa16.79■□□□□ 0.28
PHF3-209ENST00000509330 MORC2Q9Y6X9 1032 aaPredicted RBP16.79■□□□□ 0.28
PHF3-209ENST00000509330 MRPL12P52815 198 aaKnown RBP16.78■□□□□ 0.28
PHF3-209ENST00000509330 CCZ1BP86790 482 aa16.78■□□□□ 0.28
PHF3-209ENST00000509330 CCZ1P86791 482 aaPredicted RBP16.78■□□□□ 0.28
PHF3-209ENST00000509330 SPDYE2Q495Y8 402 aa16.78■□□□□ 0.28
PHF3-209ENST00000509330 ENOX1Q8TC92 643 aaKnown RBP16.78■□□□□ 0.28
PHF3-209ENST00000509330 FBXO41Q8TF61 875 aa16.78■□□□□ 0.28
PHF3-209ENST00000509330 SLC16A10Q8TF71 515 aa16.78■□□□□ 0.28
PHF3-209ENST00000509330 MKL1Q969V6 931 aa16.78■□□□□ 0.28
PHF3-209ENST00000509330 LRWD1Q9UFC0 647 aa16.78■□□□□ 0.28
PHF3-209ENST00000509330 DDX25Q9UHL0 483 aaKnown RBP16.78■□□□□ 0.28
PHF3-209ENST00000509330 ZNF646O15015 1829 aaPredicted RBP16.78■□□□□ 0.28
PHF3-209ENST00000509330 CCT6AP40227 531 aaKnown RBP16.78■□□□□ 0.28
PHF3-209ENST00000509330 SAMD7Q7Z3H4 446 aa16.78■□□□□ 0.28
PHF3-209ENST00000509330 DCAF4Q8WV16 495 aa16.78■□□□□ 0.28
PHF3-209ENST00000509330 FAM151AQ8WW52 585 aa16.78■□□□□ 0.28
PHF3-209ENST00000509330 KIFC2Q96AC6 838 aa16.78■□□□□ 0.28
PHF3-209ENST00000509330 P2RX7Q99572 595 aaKnown RBP16.78■□□□□ 0.28
PHF3-209ENST00000509330 ATRNL1Q5VV63 1379 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms