RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 MAF1Q9H063 256 aa11.92□□□□□ -0.5
RFC1-211ENST00000509084 ZCCHC17Q9NP64 241 aaKnown RBP11.92□□□□□ -0.5
RFC1-211ENST00000509084 ABT1Q9ULW3 272 aaKnown RBP11.92□□□□□ -0.5
RFC1-211ENST00000509084 PCDHA4Q9UN74 947 aa11.92□□□□□ -0.5
RFC1-211ENST00000509084 ADAMTS5Q9UNA0 930 aa11.92□□□□□ -0.5
RFC1-211ENST00000509084 KCNJ14Q9UNX9 436 aa11.92□□□□□ -0.5
RFC1-211ENST00000509084 MRPL11Q9Y3B7 192 aaKnown RBP11.92□□□□□ -0.5
RFC1-211ENST00000509084 SMCO2A6NFE2 343 aa11.91□□□□□ -0.5
RFC1-211ENST00000509084 SPDYE16A6NNV3 312 aaPredicted RBP11.91□□□□□ -0.5
RFC1-211ENST00000509084 VWA5AO00534 786 aa11.91□□□□□ -0.5
RFC1-211ENST00000509084 ATP2A1O14983 1001 aa11.91□□□□□ -0.5
RFC1-211ENST00000509084 PPP1R11O60927 126 aaPredicted RBP11.91□□□□□ -0.5
RFC1-211ENST00000509084 ADCY7P51828 1080 aa11.91□□□□□ -0.5
RFC1-211ENST00000509084 MRPL12P52815 198 aaKnown RBP11.91□□□□□ -0.5
RFC1-211ENST00000509084 INHBEP58166 350 aa11.91□□□□□ -0.5
RFC1-211ENST00000509084 MOGSQ13724 837 aa11.91□□□□□ -0.5
RFC1-211ENST00000509084 TKFCQ3LXA3 575 aa11.91□□□□□ -0.5
RFC1-211ENST00000509084 TREML2Q5T2D2 321 aa11.91□□□□□ -0.5
RFC1-211ENST00000509084 OTUD7BQ6GQQ9 843 aa11.91□□□□□ -0.5
RFC1-211ENST00000509084 CLEC17AQ6ZS10 378 aa11.91□□□□□ -0.5
RFC1-211ENST00000509084 FERMT3Q86UX7 667 aa11.91□□□□□ -0.5
RFC1-211ENST00000509084 BLIDQ8IZY5 108 aa11.91□□□□□ -0.5
RFC1-211ENST00000509084 SAMD3Q8N6K7 520 aa11.91□□□□□ -0.5
RFC1-211ENST00000509084 TNPO1Q92973 898 aaKnown RBP11.91□□□□□ -0.5
RFC1-211ENST00000509084 COA7Q96BR5 231 aa11.91□□□□□ -0.5
RFC1-211ENST00000509084 ATG4CQ96DT6 458 aa11.91□□□□□ -0.5
RFC1-211ENST00000509084 MS4A4AQ96JQ5 239 aa11.91□□□□□ -0.5
RFC1-211ENST00000509084 RIC8AQ9NPQ8 531 aa11.91□□□□□ -0.5
RFC1-211ENST00000509084 GJB4Q9NTQ9 266 aa11.91□□□□□ -0.5
RFC1-211ENST00000509084 CCPG1Q9ULG6 757 aa11.91□□□□□ -0.5
RFC1-211ENST00000509084 RLFQ13129 1914 aa11.9□□□□□ -0.5
RFC1-211ENST00000509084 TESPA1A2RU30 521 aaPredicted RBP11.9□□□□□ -0.5
RFC1-211ENST00000509084 GOLGA6L22H0YM25 854 aa11.9□□□□□ -0.5
RFC1-211ENST00000509084 COPB2P35606 906 aa11.9□□□□□ -0.5
RFC1-211ENST00000509084 SREBF2Q12772 1141 aa11.9□□□□□ -0.5
RFC1-211ENST00000509084 NPY5RQ15761 445 aa11.9□□□□□ -0.5
RFC1-211ENST00000509084 USH1GQ495M9 461 aa11.9□□□□□ -0.5
RFC1-211ENST00000509084 FOXD4L5Q5VV16 416 aaPredicted RBP11.9□□□□□ -0.5
RFC1-211ENST00000509084 GPAT2Q6NUI2 795 aa11.9□□□□□ -0.5
RFC1-211ENST00000509084 TYW1BQ6NUM6 668 aa11.9□□□□□ -0.5
RFC1-211ENST00000509084 CCDC174Q6PII3 467 aa11.9□□□□□ -0.5
RFC1-211ENST00000509084 KRT25Q7Z3Z0 450 aa11.9□□□□□ -0.5
RFC1-211ENST00000509084 NOSTRINQ8IVI9 506 aa11.9□□□□□ -0.5
RFC1-211ENST00000509084 REXO1Q8N1G1 1221 aaKnown RBP11.9□□□□□ -0.5
RFC1-211ENST00000509084 FOXD4L4Q8WXT5 416 aaPredicted RBP11.9□□□□□ -0.5
RFC1-211ENST00000509084 SPOCK2Q92563 424 aa11.9□□□□□ -0.5
RFC1-211ENST00000509084 ZNF396Q96N95 335 aaPredicted RBP11.9□□□□□ -0.5
RFC1-211ENST00000509084 TEX13BQ9BXU2 312 aa11.9□□□□□ -0.5
RFC1-211ENST00000509084 ASCC2Q9H1I8 757 aaPredicted RBP11.9□□□□□ -0.5
RFC1-211ENST00000509084 BAZ2BQ9UIF8 2168 aaKnown RBP11.9□□□□□ -0.5
RFC1-211ENST00000509084 NOL7Q9UMY1 257 aaKnown RBP11.9□□□□□ -0.5
RFC1-211ENST00000509084 MYH15Q9Y2K3 1946 aa11.9□□□□□ -0.51
RFC1-211ENST00000509084 RBBP6Q7Z6E9 1792 aaKnown RBP11.9□□□□□ -0.51
RFC1-211ENST00000509084 ZNF536O15090 1300 aa11.89□□□□□ -0.51
RFC1-211ENST00000509084 CCDC194A0A1B0GVG4 234 aa11.89□□□□□ -0.51
RFC1-211ENST00000509084 BTBD18B2RXH4 712 aa11.89□□□□□ -0.51
RFC1-211ENST00000509084 TRAPPC10P48553 1259 aa11.89□□□□□ -0.51
RFC1-211ENST00000509084 APLP1P51693 650 aa11.89□□□□□ -0.51
RFC1-211ENST00000509084 HERVK_113P62684 666 aa11.89□□□□□ -0.51
RFC1-211ENST00000509084 KRT85P78386 507 aa11.89□□□□□ -0.51
RFC1-211ENST00000509084 AP3B2Q13367 1082 aa11.89□□□□□ -0.51
RFC1-211ENST00000509084 CSPP1Q1MSJ5 1256 aa11.89□□□□□ -0.51
RFC1-211ENST00000509084 RILPL1Q5EBL4 403 aa11.89□□□□□ -0.51
RFC1-211ENST00000509084 MYSM1Q5VVJ2 828 aa11.89□□□□□ -0.51
RFC1-211ENST00000509084 MCF2L2Q86YR7 1114 aa11.89□□□□□ -0.51
RFC1-211ENST00000509084 REPS2Q8NFH8 660 aa11.89□□□□□ -0.51
RFC1-211ENST00000509084 BRI3BPQ8WY22 251 aa11.89□□□□□ -0.51
RFC1-211ENST00000509084 SHISA4Q96DD7 197 aa11.89□□□□□ -0.51
RFC1-211ENST00000509084 PARK7Q99497 189 aaKnown RBP11.89□□□□□ -0.51
RFC1-211ENST00000509084 PSTPIP2Q9H939 334 aa11.89□□□□□ -0.51
RFC1-211ENST00000509084 RTN4Q9NQC3 1192 aaKnown RBP11.89□□□□□ -0.51
RFC1-211ENST00000509084 MAP3K20Q9NYL2 800 aaKnown RBP11.89□□□□□ -0.51
RFC1-211ENST00000509084 CFAP45Q9UL16 551 aa11.89□□□□□ -0.51
RFC1-211ENST00000509084 BTBD19C9JJ37 291 aa11.88□□□□□ -0.51
RFC1-211ENST00000509084 M0R2N6 131 aa11.88□□□□□ -0.51
RFC1-211ENST00000509084 PIK3CDO00329 1044 aa11.88□□□□□ -0.51
RFC1-211ENST00000509084 PDHXO00330 501 aa11.88□□□□□ -0.51
RFC1-211ENST00000509084 FOSP01100 380 aaPredicted RBP11.88□□□□□ -0.51
RFC1-211ENST00000509084 GCLCP48506 637 aaPredicted RBP11.88□□□□□ -0.51
RFC1-211ENST00000509084 SNAP25P60880 206 aa11.88□□□□□ -0.51
RFC1-211ENST00000509084 MKRN3Q13064 507 aaKnown RBP11.88□□□□□ -0.51
RFC1-211ENST00000509084 NR5A1Q13285 461 aa11.88□□□□□ -0.51
RFC1-211ENST00000509084 CPXCR1Q8N123 301 aa11.88□□□□□ -0.51
RFC1-211ENST00000509084 SMCR8Q8TEV9 937 aaPredicted RBP11.88□□□□□ -0.51
RFC1-211ENST00000509084 TNFRSF25Q93038 417 aa11.88□□□□□ -0.51
RFC1-211ENST00000509084 KIF12Q96FN5 646 aa11.88□□□□□ -0.51
RFC1-211ENST00000509084 MS4A3Q96HJ5 214 aa11.88□□□□□ -0.51
RFC1-211ENST00000509084 EHMT1Q9H9B1 1298 aa11.88□□□□□ -0.51
RFC1-211ENST00000509084 RAVER2Q9HCJ3 691 aaKnown RBP11.88□□□□□ -0.51
RFC1-211ENST00000509084 ZNF214Q9UL59 606 aaPredicted RBP11.88□□□□□ -0.51
RFC1-211ENST00000509084 RABGAP1Q9Y3P9 1069 aa11.88□□□□□ -0.51
RFC1-211ENST00000509084 COL11A1P12107 1806 aaPredicted RBP11.88□□□□□ -0.51
RFC1-211ENST00000509084 RASSF10A6NK89 507 aa11.87□□□□□ -0.51
RFC1-211ENST00000509084 KIF28PB7ZC32 967 aa11.87□□□□□ -0.51
RFC1-211ENST00000509084 GCOM1H8Y6P7 765 aaPredicted RBP11.87□□□□□ -0.51
RFC1-211ENST00000509084 BAG4O95429 457 aaKnown RBP11.87□□□□□ -0.51
RFC1-211ENST00000509084 SLC25A27O95847 323 aa11.87□□□□□ -0.51
RFC1-211ENST00000509084 POLR2MP0CAP2 368 aa11.87□□□□□ -0.51
RFC1-211ENST00000509084 ALAS1P13196 640 aa11.87□□□□□ -0.51
RFC1-211ENST00000509084 PTMSP20962 102 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms