RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 ANKRD35Q8N283 1001 aa12.33□□□□□ -0.44
POLR2J3-213ENST00000508848 FANCBQ8NB91 859 aa12.33□□□□□ -0.44
POLR2J3-213ENST00000508848 CTCFLQ8NI51 663 aaPredicted RBP12.33□□□□□ -0.44
POLR2J3-213ENST00000508848 MORC4Q8TE76 937 aa12.33□□□□□ -0.44
POLR2J3-213ENST00000508848 TINF2Q9BSI4 451 aa12.33□□□□□ -0.44
POLR2J3-213ENST00000508848 RNF208Q9H0X6 261 aa12.33□□□□□ -0.44
POLR2J3-213ENST00000508848 RNF146Q9NTX7 359 aa12.33□□□□□ -0.44
POLR2J3-213ENST00000508848 SLC12A7Q9Y666 1083 aa12.33□□□□□ -0.44
POLR2J3-213ENST00000508848 ABCB11O95342 1321 aa12.33□□□□□ -0.44
POLR2J3-213ENST00000508848 FRMPD2Q68DX3 1309 aaPredicted RBP12.33□□□□□ -0.44
POLR2J3-213ENST00000508848 MKI67P46013 3256 aaKnown RBP12.33□□□□□ -0.44
POLR2J3-213ENST00000508848 PNMA6FA0A0J9YX94 578 aa12.32□□□□□ -0.44
POLR2J3-213ENST00000508848 CCDC196A0A1B0GTZ2 297 aa12.32□□□□□ -0.44
POLR2J3-213ENST00000508848 GOLGA8HP0CJ92 632 aa12.32□□□□□ -0.44
POLR2J3-213ENST00000508848 ALAS1P13196 640 aa12.32□□□□□ -0.44
POLR2J3-213ENST00000508848 MTFR1Q15390 333 aa12.32□□□□□ -0.44
POLR2J3-213ENST00000508848 APOA5Q6Q788 366 aa12.32□□□□□ -0.44
POLR2J3-213ENST00000508848 SAMD1Q6SPF0 538 aaPredicted RBP12.32□□□□□ -0.44
POLR2J3-213ENST00000508848 RUFY3Q7L099 469 aa12.32□□□□□ -0.44
POLR2J3-213ENST00000508848 FBXO11Q86XK2 927 aa12.32□□□□□ -0.44
POLR2J3-213ENST00000508848 MCF2L2Q86YR7 1114 aa12.32□□□□□ -0.44
POLR2J3-213ENST00000508848 STAG2Q8N3U4 1231 aa12.32□□□□□ -0.44
POLR2J3-213ENST00000508848 DNERQ8NFT8 737 aa12.32□□□□□ -0.44
POLR2J3-213ENST00000508848 CLEC4DQ8WXI8 215 aa12.32□□□□□ -0.44
POLR2J3-213ENST00000508848 AMNQ9BXJ7 453 aa12.32□□□□□ -0.44
POLR2J3-213ENST00000508848 UBA5Q9GZZ9 404 aa12.32□□□□□ -0.44
POLR2J3-213ENST00000508848 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.32□□□□□ -0.44
POLR2J3-213ENST00000508848 SENP2Q9HC62 589 aa12.32□□□□□ -0.44
POLR2J3-213ENST00000508848 A1CFQ9NQ94 594 aaKnown RBP12.32□□□□□ -0.44
POLR2J3-213ENST00000508848 CYP39A1Q9NYL5 469 aa12.32□□□□□ -0.44
POLR2J3-213ENST00000508848 FLRT1Q9NZU1 646 aa12.32□□□□□ -0.44
POLR2J3-213ENST00000508848 ADD3Q9UEY8 706 aaKnown RBP12.32□□□□□ -0.44
POLR2J3-213ENST00000508848 OGDHLQ9ULD0 1010 aa12.32□□□□□ -0.44
POLR2J3-213ENST00000508848 MRPL11Q9Y3B7 192 aaKnown RBP12.32□□□□□ -0.44
POLR2J3-213ENST00000508848 MCM3APO60318 1980 aa12.32□□□□□ -0.44
POLR2J3-213ENST00000508848 NID2Q14112 1375 aa12.31□□□□□ -0.44
POLR2J3-213ENST00000508848 DNAH12Q6ZR08 3092 aa12.31□□□□□ -0.44
POLR2J3-213ENST00000508848 ASB14A6NK59 587 aa12.31□□□□□ -0.44
POLR2J3-213ENST00000508848 B4DLN1 442 aa12.31□□□□□ -0.44
POLR2J3-213ENST00000508848 CYTH3O43739 400 aa12.31□□□□□ -0.44
POLR2J3-213ENST00000508848 PRKAR2AP13861 404 aaKnown RBP12.31□□□□□ -0.44
POLR2J3-213ENST00000508848 RPS6KB1P23443 525 aa12.31□□□□□ -0.44
POLR2J3-213ENST00000508848 MRPL12P52815 198 aaKnown RBP12.31□□□□□ -0.44
POLR2J3-213ENST00000508848 CDC37Q16543 378 aaPredicted RBP12.31□□□□□ -0.44
POLR2J3-213ENST00000508848 CCL14Q16627 93 aa12.31□□□□□ -0.44
POLR2J3-213ENST00000508848 RASGRP2Q7LDG7 609 aa12.31□□□□□ -0.44
POLR2J3-213ENST00000508848 UBE2Q1Q7Z7E8 422 aa12.31□□□□□ -0.44
POLR2J3-213ENST00000508848 UNC93B1Q9H1C4 597 aa12.31□□□□□ -0.44
POLR2J3-213ENST00000508848 ABHD16BQ9H3Z7 469 aa12.31□□□□□ -0.44
POLR2J3-213ENST00000508848 RBM28Q9NW13 759 aaKnown RBP12.31□□□□□ -0.44
POLR2J3-213ENST00000508848 ISY1Q9ULR0 285 aaKnown RBP12.31□□□□□ -0.44
POLR2J3-213ENST00000508848 MTMR7Q9Y216 660 aa12.31□□□□□ -0.44
POLR2J3-213ENST00000508848 POTEB2H3BUK9 544 aa12.3□□□□□ -0.44
POLR2J3-213ENST00000508848 SEPT4O43236 478 aa12.3□□□□□ -0.44
POLR2J3-213ENST00000508848 ECM2O94769 699 aaPredicted RBP12.3□□□□□ -0.44
POLR2J3-213ENST00000508848 CYBAP13498 195 aa12.3□□□□□ -0.44
POLR2J3-213ENST00000508848 NKX3-2P78367 333 aa12.3□□□□□ -0.44
POLR2J3-213ENST00000508848 COL9A3Q14050 684 aaPredicted RBP12.3□□□□□ -0.44
POLR2J3-213ENST00000508848 QRICH1Q2TAL8 776 aa12.3□□□□□ -0.44
POLR2J3-213ENST00000508848 LHX8Q68G74 356 aa12.3□□□□□ -0.44
POLR2J3-213ENST00000508848 CCDC174Q6PII3 467 aa12.3□□□□□ -0.44
POLR2J3-213ENST00000508848 NFXL1Q6ZNB6 911 aa12.3□□□□□ -0.44
POLR2J3-213ENST00000508848 U2AF1L4Q8WU68 220 aaKnown RBP12.3□□□□□ -0.44
POLR2J3-213ENST00000508848 FGD4Q96M96 766 aa12.3□□□□□ -0.44
POLR2J3-213ENST00000508848 JAKMIP1Q96N16 626 aaKnown RBP12.3□□□□□ -0.44
POLR2J3-213ENST00000508848 CYP46A1Q9Y6A2 500 aa12.3□□□□□ -0.44
POLR2J3-213ENST00000508848 LCTP09848 1927 aa12.29□□□□□ -0.44
POLR2J3-213ENST00000508848 POTEFA5A3E0 1075 aa12.29□□□□□ -0.44
POLR2J3-213ENST00000508848 ZBTB43O43298 467 aa12.29□□□□□ -0.44
POLR2J3-213ENST00000508848 SLC35G1Q2M3R5 365 aa12.29□□□□□ -0.44
POLR2J3-213ENST00000508848 MUM1L1Q5H9M0 696 aa12.29□□□□□ -0.44
POLR2J3-213ENST00000508848 RNF207Q6ZRF8 634 aa12.29□□□□□ -0.44
POLR2J3-213ENST00000508848 ZNF274Q96GC6 653 aaPredicted RBP12.29□□□□□ -0.44
POLR2J3-213ENST00000508848 IWS1Q96ST2 819 aa12.29□□□□□ -0.44
POLR2J3-213ENST00000508848 MPHOSPH6Q99547 160 aaKnown RBP12.29□□□□□ -0.44
POLR2J3-213ENST00000508848 GPHNQ9NQX3 736 aaPredicted RBP12.29□□□□□ -0.44
POLR2J3-213ENST00000508848 RBM27Q9P2N5 1060 aaKnown RBP12.29□□□□□ -0.44
POLR2J3-213ENST00000508848 FRMPD3Q5JV73 1810 aa12.28□□□□□ -0.44
POLR2J3-213ENST00000508848 SOWAHBA6NEL2 793 aa12.28□□□□□ -0.44
POLR2J3-213ENST00000508848 SNAI1O95863 264 aaPredicted RBP12.28□□□□□ -0.44
POLR2J3-213ENST00000508848 PGK2P07205 417 aa12.28□□□□□ -0.44
POLR2J3-213ENST00000508848 EN2P19622 333 aaPredicted RBP12.28□□□□□ -0.44
POLR2J3-213ENST00000508848 CASTP20810 708 aaKnown RBP12.28□□□□□ -0.44
POLR2J3-213ENST00000508848 EDNRBP24530 442 aa12.28□□□□□ -0.44
POLR2J3-213ENST00000508848 CYP2C19P33261 490 aa12.28□□□□□ -0.44
POLR2J3-213ENST00000508848 HSD17B4P51659 736 aa12.28□□□□□ -0.44
POLR2J3-213ENST00000508848 RPS6P62753 249 aaKnown RBP12.28□□□□□ -0.44
POLR2J3-213ENST00000508848 FUT2Q10981 343 aa12.28□□□□□ -0.44
POLR2J3-213ENST00000508848 TRIM32Q13049 653 aa12.28□□□□□ -0.44
POLR2J3-213ENST00000508848 BAATQ14032 418 aaPredicted RBP12.28□□□□□ -0.44
POLR2J3-213ENST00000508848 Q6ZUG5 572 aa12.28□□□□□ -0.44
POLR2J3-213ENST00000508848 TMTC3Q6ZXV5 915 aa12.28□□□□□ -0.44
POLR2J3-213ENST00000508848 FAM177A1Q8N128 213 aaPredicted RBP12.28□□□□□ -0.44
POLR2J3-213ENST00000508848 SRBD1Q8N5C6 995 aaKnown RBP12.28□□□□□ -0.44
POLR2J3-213ENST00000508848 RRP36Q96EU6 259 aaKnown RBP12.28□□□□□ -0.44
POLR2J3-213ENST00000508848 DEFB118Q96PH6 123 aa12.28□□□□□ -0.44
POLR2J3-213ENST00000508848 VAT1LQ9HCJ6 419 aa12.28□□□□□ -0.44
POLR2J3-213ENST00000508848 DDX20Q9UHI6 824 aaKnown RBP12.28□□□□□ -0.44
POLR2J3-213ENST00000508848 BRPF3Q9ULD4 1205 aa12.28□□□□□ -0.44
POLR2J3-213ENST00000508848 CNPY2Q9Y2B0 182 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms