RNA–Protein interactions for RNA: ENST00000508679.5

CALCOCO2-211, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2 BASIC

Gene CALCOCO2, Length 1,396 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-211ENST00000508679 CENPFP49454 3210 aa17.33■□□□□ 0.36
CALCOCO2-211ENST00000508679 LRRC37A2A6NM11 1700 aa17.33■□□□□ 0.36
CALCOCO2-211ENST00000508679 MCM3APO60318 1980 aa17.32■□□□□ 0.36
CALCOCO2-211ENST00000508679 NFIBO00712 420 aa17.32■□□□□ 0.36
CALCOCO2-211ENST00000508679 COPB2P35606 906 aa17.32■□□□□ 0.36
CALCOCO2-211ENST00000508679 MCM2P49736 904 aa17.32■□□□□ 0.36
CALCOCO2-211ENST00000508679 PLS1Q14651 629 aa17.32■□□□□ 0.36
CALCOCO2-211ENST00000508679 PFKFB3Q16875 520 aaPredicted RBP17.32■□□□□ 0.36
CALCOCO2-211ENST00000508679 ABRAQ8N0Z2 381 aa17.32■□□□□ 0.36
CALCOCO2-211ENST00000508679 TBC1D5Q92609 795 aa17.32■□□□□ 0.36
CALCOCO2-211ENST00000508679 COA7Q96BR5 231 aa17.32■□□□□ 0.36
CALCOCO2-211ENST00000508679 RRP36Q96EU6 259 aaKnown RBP17.32■□□□□ 0.36
CALCOCO2-211ENST00000508679 FGD4Q96M96 766 aa17.32■□□□□ 0.36
CALCOCO2-211ENST00000508679 TRERF1Q96PN7 1200 aa17.32■□□□□ 0.36
CALCOCO2-211ENST00000508679 PRDM10Q9NQV6 1147 aa17.32■□□□□ 0.36
CALCOCO2-211ENST00000508679 RNF146Q9NTX7 359 aa17.32■□□□□ 0.36
CALCOCO2-211ENST00000508679 PNMA2Q9UL42 364 aa17.32■□□□□ 0.36
CALCOCO2-211ENST00000508679 GABRQQ9UN88 632 aa17.32■□□□□ 0.36
CALCOCO2-211ENST00000508679 STK36Q9NRP7 1315 aa17.32■□□□□ 0.36
CALCOCO2-211ENST00000508679 PPFIA3O75145 1194 aa17.31■□□□□ 0.36
CALCOCO2-211ENST00000508679 ALAS1P13196 640 aa17.31■□□□□ 0.36
CALCOCO2-211ENST00000508679 CUL4AQ13619 759 aa17.31■□□□□ 0.36
CALCOCO2-211ENST00000508679 WWC2Q6AWC2 1192 aa17.31■□□□□ 0.36
CALCOCO2-211ENST00000508679 OTOP1Q7RTM1 612 aa17.31■□□□□ 0.36
CALCOCO2-211ENST00000508679 PLEKHH3Q7Z736 793 aa17.31■□□□□ 0.36
CALCOCO2-211ENST00000508679 NCAPG2Q86XI2 1143 aa17.31■□□□□ 0.36
CALCOCO2-211ENST00000508679 RGS22Q8NE09 1264 aa17.31■□□□□ 0.36
CALCOCO2-211ENST00000508679 A1CFQ9NQ94 594 aaKnown RBP17.31■□□□□ 0.36
CALCOCO2-211ENST00000508679 ABCB11O95342 1321 aa17.31■□□□□ 0.36
CALCOCO2-211ENST00000508679 STXBP3O00186 592 aa17.3■□□□□ 0.36
CALCOCO2-211ENST00000508679 ADAMTS3O15072 1205 aa17.3■□□□□ 0.36
CALCOCO2-211ENST00000508679 STRNO43815 780 aa17.3■□□□□ 0.36
CALCOCO2-211ENST00000508679 DHX16O60231 1041 aaKnown RBP17.3■□□□□ 0.36
CALCOCO2-211ENST00000508679 JAK2O60674 1132 aa17.3■□□□□ 0.36
CALCOCO2-211ENST00000508679 COBLO75128 1261 aa17.3■□□□□ 0.36
CALCOCO2-211ENST00000508679 HOXC6P09630 235 aa17.3■□□□□ 0.36
CALCOCO2-211ENST00000508679 FCGRTP55899 365 aa17.3■□□□□ 0.36
CALCOCO2-211ENST00000508679 USH1GQ495M9 461 aa17.3■□□□□ 0.36
CALCOCO2-211ENST00000508679 CCDC83Q8IWF9 413 aa17.3■□□□□ 0.36
CALCOCO2-211ENST00000508679 PIBF1Q8WXW3 757 aa17.3■□□□□ 0.36
CALCOCO2-211ENST00000508679 MAF1Q9H063 256 aa17.3■□□□□ 0.36
CALCOCO2-211ENST00000508679 ACAD9Q9H845 621 aa17.3■□□□□ 0.36
CALCOCO2-211ENST00000508679 SRRDQ9UH36 339 aa17.3■□□□□ 0.36
CALCOCO2-211ENST00000508679 PCDHA1Q9Y5I3 950 aa17.3■□□□□ 0.36
CALCOCO2-211ENST00000508679 ASTN1O14525 1302 aa17.3■□□□□ 0.36
CALCOCO2-211ENST00000508679 SLC15A5A6NIM6 579 aa17.29■□□□□ 0.36
CALCOCO2-211ENST00000508679 GNRH1P01148 92 aa17.29■□□□□ 0.36
CALCOCO2-211ENST00000508679 SCG2P13521 617 aa17.29■□□□□ 0.36
CALCOCO2-211ENST00000508679 FAM133AQ8N9E0 248 aa17.29■□□□□ 0.36
CALCOCO2-211ENST00000508679 GPKOWQ92917 476 aaPredicted RBP eCLIP17.29■□□□□ 0.36
CALCOCO2-211ENST00000508679 AIFM3Q96NN9 605 aa17.29■□□□□ 0.36
CALCOCO2-211ENST00000508679 LLPHQ9BRT6 129 aaKnown RBP17.29■□□□□ 0.36
CALCOCO2-211ENST00000508679 SLC26A6Q9BXS9 759 aa17.29■□□□□ 0.36
CALCOCO2-211ENST00000508679 BARHL2Q9NY43 387 aa17.29■□□□□ 0.36
CALCOCO2-211ENST00000508679 CYP39A1Q9NYL5 469 aa17.29■□□□□ 0.36
CALCOCO2-211ENST00000508679 FBXO40Q9UH90 709 aa17.29■□□□□ 0.36
CALCOCO2-211ENST00000508679 TNPO2O14787 897 aaKnown RBP17.28■□□□□ 0.36
CALCOCO2-211ENST00000508679 ECM2O94769 699 aaPredicted RBP17.28■□□□□ 0.36
CALCOCO2-211ENST00000508679 HSD17B4P51659 736 aa17.28■□□□□ 0.36
CALCOCO2-211ENST00000508679 PRKCZQ05513 592 aa17.28■□□□□ 0.36
CALCOCO2-211ENST00000508679 NPY5RQ15761 445 aa17.28■□□□□ 0.36
CALCOCO2-211ENST00000508679 ZNF792Q3KQV3 632 aa17.28■□□□□ 0.36
CALCOCO2-211ENST00000508679 HOMER2Q9NSB8 354 aa17.28■□□□□ 0.36
CALCOCO2-211ENST00000508679 COL20A1Q9P218 1284 aa17.28■□□□□ 0.36
CALCOCO2-211ENST00000508679 RBM27Q9P2N5 1060 aaKnown RBP17.28■□□□□ 0.36
CALCOCO2-211ENST00000508679 PTPDC1A2A3K4 754 aa17.28■□□□□ 0.36
CALCOCO2-211ENST00000508679 hCG_1984214I3L0E3 225 aa17.28■□□□□ 0.36
CALCOCO2-211ENST00000508679 MEIS2O14770 477 aa17.28■□□□□ 0.36
CALCOCO2-211ENST00000508679 DEXIO95424 95 aa17.28■□□□□ 0.36
CALCOCO2-211ENST00000508679 ADORA2AP29274 412 aa17.28■□□□□ 0.36
CALCOCO2-211ENST00000508679 FLT3LGP49771 235 aa17.28■□□□□ 0.36
CALCOCO2-211ENST00000508679 SSRP1Q08945 709 aaKnown RBP17.28■□□□□ 0.36
CALCOCO2-211ENST00000508679 MAP2K5Q13163 448 aa17.28■□□□□ 0.36
CALCOCO2-211ENST00000508679 IRF5Q13568 498 aa17.28■□□□□ 0.36
CALCOCO2-211ENST00000508679 ZNF713Q8N859 430 aaPredicted RBP17.28■□□□□ 0.36
CALCOCO2-211ENST00000508679 NPLOC4Q8TAT6 608 aa17.28■□□□□ 0.36
CALCOCO2-211ENST00000508679 MRPL11Q9Y3B7 192 aaKnown RBP17.28■□□□□ 0.36
CALCOCO2-211ENST00000508679 CTDP1Q9Y5B0 961 aaPredicted RBP17.28■□□□□ 0.36
CALCOCO2-211ENST00000508679 CPLX1O14810 134 aa17.27■□□□□ 0.35
CALCOCO2-211ENST00000508679 FCER1AP12319 257 aa17.27■□□□□ 0.35
CALCOCO2-211ENST00000508679 XRCC5P13010 732 aaKnown RBP17.27■□□□□ 0.35
CALCOCO2-211ENST00000508679 KIF22Q14807 665 aa17.27■□□□□ 0.35
CALCOCO2-211ENST00000508679 SLC30A10Q6XR72 485 aa17.27■□□□□ 0.35
CALCOCO2-211ENST00000508679 PURBQ96QR8 312 aaKnown RBP17.27■□□□□ 0.35
CALCOCO2-211ENST00000508679 MMP19Q99542 508 aa17.27■□□□□ 0.35
CALCOCO2-211ENST00000508679 SEC63Q9UGP8 760 aaKnown RBP17.27■□□□□ 0.35
CALCOCO2-211ENST00000508679 MYH7BA7E2Y1 1941 aa17.26■□□□□ 0.35
CALCOCO2-211ENST00000508679 ESYT2A0FGR8 921 aa17.26■□□□□ 0.35
CALCOCO2-211ENST00000508679 SOWAHBA6NEL2 793 aa17.26■□□□□ 0.35
CALCOCO2-211ENST00000508679 K7ELQ4 463 aaPredicted RBP17.26■□□□□ 0.35
CALCOCO2-211ENST00000508679 PIK3CDO00329 1044 aa17.26■□□□□ 0.35
CALCOCO2-211ENST00000508679 CDKL5O76039 1030 aa17.26■□□□□ 0.35
CALCOCO2-211ENST00000508679 PGK2P07205 417 aa17.26■□□□□ 0.35
CALCOCO2-211ENST00000508679 SLC4A3P48751 1232 aa17.26■□□□□ 0.35
CALCOCO2-211ENST00000508679 CLK2P49760 499 aaKnown RBP17.26■□□□□ 0.35
CALCOCO2-211ENST00000508679 PRMT2P55345 433 aa17.26■□□□□ 0.35
CALCOCO2-211ENST00000508679 RPS6P62753 249 aaKnown RBP17.26■□□□□ 0.35
CALCOCO2-211ENST00000508679 CNTN2Q02246 1040 aa17.26■□□□□ 0.35
CALCOCO2-211ENST00000508679 BAATQ14032 418 aaPredicted RBP17.26■□□□□ 0.35
CALCOCO2-211ENST00000508679 PPP1R18Q6NYC8 613 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms