RNA–Protein interactions for RNA: ENST00000508550.5

CCSER1-207, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 3

Gene CCSER1, Length 716 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-207ENST00000508550 USP40Q9NVE5 1235 aa9.35□□□□□ -0.91
CCSER1-207ENST00000508550 ORC3Q9UBD5 711 aaPredicted RBP9.35□□□□□ -0.91
CCSER1-207ENST00000508550 SERPINB13Q9UIV8 391 aa9.35□□□□□ -0.91
CCSER1-207ENST00000508550 TACC3Q9Y6A5 838 aa9.35□□□□□ -0.91
CCSER1-207ENST00000508550 LAMA4Q16363 1823 aa9.34□□□□□ -0.91
CCSER1-207ENST00000508550 KIF13BQ9NQT8 1826 aa9.34□□□□□ -0.91
CCSER1-207ENST00000508550 SPATA31C2B4DYI2 1134 aa9.34□□□□□ -0.91
CCSER1-207ENST00000508550 hCG_1984214I3L0E3 225 aa9.34□□□□□ -0.91
CCSER1-207ENST00000508550 RNF225M0QZC1 329 aaPredicted RBP9.34□□□□□ -0.91
CCSER1-207ENST00000508550 TSPY3P0CV98 308 aa9.34□□□□□ -0.91
CCSER1-207ENST00000508550 TSPY8P0CW00 308 aa9.34□□□□□ -0.91
CCSER1-207ENST00000508550 U2AF2P26368 475 aaKnown RBP eCLIP9.34□□□□□ -0.91
CCSER1-207ENST00000508550 CDK8P49336 464 aa9.34□□□□□ -0.91
CCSER1-207ENST00000508550 CCT2P78371 535 aaKnown RBP9.34□□□□□ -0.91
CCSER1-207ENST00000508550 TFAP4Q01664 338 aa9.34□□□□□ -0.91
CCSER1-207ENST00000508550 RESTQ13127 1097 aa9.34□□□□□ -0.91
CCSER1-207ENST00000508550 TRIM29Q14134 588 aa9.34□□□□□ -0.91
CCSER1-207ENST00000508550 DBN1Q16643 649 aa9.34□□□□□ -0.91
CCSER1-207ENST00000508550 AOC3Q16853 763 aa9.34□□□□□ -0.91
CCSER1-207ENST00000508550 MCTP1Q6DN14 999 aa9.34□□□□□ -0.91
CCSER1-207ENST00000508550 CDC42EP5Q6NZY7 148 aa9.34□□□□□ -0.91
CCSER1-207ENST00000508550 CYP2U1Q7Z449 544 aa9.34□□□□□ -0.91
CCSER1-207ENST00000508550 FAM83AQ86UY5 434 aa9.34□□□□□ -0.91
CCSER1-207ENST00000508550 LARGE2Q8N3Y3 721 aa9.34□□□□□ -0.91
CCSER1-207ENST00000508550 TMEM151AQ8N4L1 468 aa9.34□□□□□ -0.91
CCSER1-207ENST00000508550 ZNF713Q8N859 430 aaPredicted RBP9.34□□□□□ -0.91
CCSER1-207ENST00000508550 CTCFLQ8NI51 663 aaPredicted RBP9.34□□□□□ -0.91
CCSER1-207ENST00000508550 JDP2Q8WYK2 163 aa9.34□□□□□ -0.91
CCSER1-207ENST00000508550 C8orf76Q96K31 380 aa9.34□□□□□ -0.91
CCSER1-207ENST00000508550 TAOK3Q9H2K8 898 aa9.34□□□□□ -0.91
CCSER1-207ENST00000508550 FOXP1Q9H334 677 aaPredicted RBP9.34□□□□□ -0.91
CCSER1-207ENST00000508550 DBNDD1Q9H9R9 158 aa9.34□□□□□ -0.91
CCSER1-207ENST00000508550 SH3GLB2Q9NR46 395 aa9.34□□□□□ -0.91
CCSER1-207ENST00000508550 CASZ1Q86V15 1759 aa9.34□□□□□ -0.91
CCSER1-207ENST00000508550 COL11A2P13942 1736 aaPredicted RBP9.34□□□□□ -0.92
CCSER1-207ENST00000508550 JAK2O60674 1132 aa9.33□□□□□ -0.92
CCSER1-207ENST00000508550 TOP1P11387 765 aaKnown RBP9.33□□□□□ -0.92
CCSER1-207ENST00000508550 RASA1P20936 1047 aa9.33□□□□□ -0.92
CCSER1-207ENST00000508550 CDC27P30260 824 aa9.33□□□□□ -0.92
CCSER1-207ENST00000508550 PLCD1P51178 756 aa9.33□□□□□ -0.92
CCSER1-207ENST00000508550 AKAP17AQ02040 695 aaKnown RBP9.33□□□□□ -0.92
CCSER1-207ENST00000508550 MAP3K10Q02779 954 aa9.33□□□□□ -0.92
CCSER1-207ENST00000508550 SAFBQ15424 915 aaKnown RBP eCLIP9.33□□□□□ -0.92
CCSER1-207ENST00000508550 RRP12Q5JTH9 1297 aaKnown RBP9.33□□□□□ -0.92
CCSER1-207ENST00000508550 TATDN1Q6P1N9 297 aa9.33□□□□□ -0.92
CCSER1-207ENST00000508550 NBPF11Q86T75 865 aa9.33□□□□□ -0.92
CCSER1-207ENST00000508550 MAPKAPK5Q8IW41 473 aa9.33□□□□□ -0.92
CCSER1-207ENST00000508550 NIM1KQ8IY84 436 aa9.33□□□□□ -0.92
CCSER1-207ENST00000508550 MKL1Q969V6 931 aa9.33□□□□□ -0.92
CCSER1-207ENST00000508550 ZNF837Q96EG3 531 aaPredicted RBP9.33□□□□□ -0.92
CCSER1-207ENST00000508550 PDGFDQ9GZP0 370 aaPredicted RBP9.33□□□□□ -0.92
CCSER1-207ENST00000508550 KAT14Q9H8E8 782 aa9.33□□□□□ -0.92
CCSER1-207ENST00000508550 HERC5Q9UII4 1024 aaKnown RBP9.33□□□□□ -0.92
CCSER1-207ENST00000508550 RCOR1Q9UKL0 485 aa9.33□□□□□ -0.92
CCSER1-207ENST00000508550 PCDHB11Q9Y5F2 797 aa9.33□□□□□ -0.92
CCSER1-207ENST00000508550 DDX49Q9Y6V7 483 aaKnown RBP9.33□□□□□ -0.92
CCSER1-207ENST00000508550 TAF1P21675 1872 aa9.32□□□□□ -0.92
CCSER1-207ENST00000508550 IGKV6D-41A0A0C4DH26 115 aa9.32□□□□□ -0.92
CCSER1-207ENST00000508550 VPS37CA5D8V6 355 aaPredicted RBP9.32□□□□□ -0.92
CCSER1-207ENST00000508550 YDJCA8MPS7 323 aa9.32□□□□□ -0.92
CCSER1-207ENST00000508550 PRPF40AO75400 957 aaKnown RBP9.32□□□□□ -0.92
CCSER1-207ENST00000508550 GDF11O95390 407 aa9.32□□□□□ -0.92
CCSER1-207ENST00000508550 YEATS4O95619 227 aa9.32□□□□□ -0.92
CCSER1-207ENST00000508550 BMP15O95972 392 aa9.32□□□□□ -0.92
CCSER1-207ENST00000508550 ZNF280AP59817 542 aaPredicted RBP9.32□□□□□ -0.92
CCSER1-207ENST00000508550 ZNF445P59923 1031 aa9.32□□□□□ -0.92
CCSER1-207ENST00000508550 POU4F2Q12837 409 aa9.32□□□□□ -0.92
CCSER1-207ENST00000508550 LYPD4Q6UWN0 246 aa9.32□□□□□ -0.92
CCSER1-207ENST00000508550 OLFM4Q6UX06 510 aa9.32□□□□□ -0.92
CCSER1-207ENST00000508550 TMTC3Q6ZXV5 915 aa9.32□□□□□ -0.92
CCSER1-207ENST00000508550 CDC37L1Q7L3B6 337 aa9.32□□□□□ -0.92
CCSER1-207ENST00000508550 MICU3Q86XE3 530 aa9.32□□□□□ -0.92
CCSER1-207ENST00000508550 KCNG4Q8TDN1 519 aa9.32□□□□□ -0.92
CCSER1-207ENST00000508550 FAM151AQ8WW52 585 aa9.32□□□□□ -0.92
CCSER1-207ENST00000508550 ZBED3Q96IU2 234 aaPredicted RBP9.32□□□□□ -0.92
CCSER1-207ENST00000508550 NCOA5Q9HCD5 579 aaKnown RBP9.32□□□□□ -0.92
CCSER1-207ENST00000508550 IL17RBQ9NRM6 502 aa9.32□□□□□ -0.92
CCSER1-207ENST00000508550 RTEL1Q9NZ71 1219 aa9.32□□□□□ -0.92
CCSER1-207ENST00000508550 TMOD2Q9NZR1 351 aa9.32□□□□□ -0.92
CCSER1-207ENST00000508550 DLEC1Q9Y238 1755 aa9.32□□□□□ -0.92
CCSER1-207ENST00000508550 PALM3A6NDB9 673 aaPredicted RBP9.31□□□□□ -0.92
CCSER1-207ENST00000508550 FZD9O00144 591 aa9.31□□□□□ -0.92
CCSER1-207ENST00000508550 MYO1BO43795 1136 aa9.31□□□□□ -0.92
CCSER1-207ENST00000508550 ZBTB7AO95365 584 aa9.31□□□□□ -0.92
CCSER1-207ENST00000508550 TTLL1O95922 423 aa9.31□□□□□ -0.92
CCSER1-207ENST00000508550 SNHG28P0DPA3 235 aa9.31□□□□□ -0.92
CCSER1-207ENST00000508550 TRAPPC10P48553 1259 aa9.31□□□□□ -0.92
CCSER1-207ENST00000508550 NASPP49321 788 aaPredicted RBP9.31□□□□□ -0.92
CCSER1-207ENST00000508550 GRM4Q14833 912 aa9.31□□□□□ -0.92
CCSER1-207ENST00000508550 CIAPIN1Q6FI81 312 aa9.31□□□□□ -0.92
CCSER1-207ENST00000508550 USP48Q86UV5 1035 aa9.31□□□□□ -0.92
CCSER1-207ENST00000508550 KCTD17Q8N5Z5 321 aa9.31□□□□□ -0.92
CCSER1-207ENST00000508550 JMYQ8N9B5 988 aa9.31□□□□□ -0.92
CCSER1-207ENST00000508550 ALG1Q9BT22 464 aa9.31□□□□□ -0.92
CCSER1-207ENST00000508550 SPZ1Q9BXG8 430 aa9.31□□□□□ -0.92
CCSER1-207ENST00000508550 SPON1Q9HCB6 807 aa9.31□□□□□ -0.92
CCSER1-207ENST00000508550 INCENPQ9NQS7 918 aa9.31□□□□□ -0.92
CCSER1-207ENST00000508550 MTMR4Q9NYA4 1195 aa9.31□□□□□ -0.92
CCSER1-207ENST00000508550 NAP1L2Q9ULW6 460 aaPredicted RBP9.31□□□□□ -0.92
CCSER1-207ENST00000508550 JAG2Q9Y219 1238 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms