RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 ITGA7Q13683 1181 aa11.25□□□□□ -0.61
NEDD9-211ENST00000508546 CSPP1Q1MSJ5 1256 aa11.25□□□□□ -0.61
NEDD9-211ENST00000508546 SBK1Q52WX2 424 aa11.25□□□□□ -0.61
NEDD9-211ENST00000508546 OTOP2Q7RTS6 562 aa11.25□□□□□ -0.61
NEDD9-211ENST00000508546 RPUSD2Q8IZ73 545 aaKnown RBP11.25□□□□□ -0.61
NEDD9-211ENST00000508546 NOC4LQ9BVI4 516 aaKnown RBP11.25□□□□□ -0.61
NEDD9-211ENST00000508546 SYNPO2Q9UMS6 1093 aa11.25□□□□□ -0.61
NEDD9-211ENST00000508546 GNEQ9Y223 722 aaKnown RBP11.25□□□□□ -0.61
NEDD9-211ENST00000508546 CTDP1Q9Y5B0 961 aaPredicted RBP11.25□□□□□ -0.61
NEDD9-211ENST00000508546 SLC4A4Q9Y6R1 1079 aa11.25□□□□□ -0.61
NEDD9-211ENST00000508546 ASTN1O14525 1302 aa11.25□□□□□ -0.61
NEDD9-211ENST00000508546 UMODL1Q5DID0 1318 aa11.25□□□□□ -0.61
NEDD9-211ENST00000508546 TRIP12Q14669 1992 aaPredicted RBP11.25□□□□□ -0.61
NEDD9-211ENST00000508546 TET1Q8NFU7 2136 aa11.24□□□□□ -0.61
NEDD9-211ENST00000508546 CCER2I3L3R5 266 aa11.24□□□□□ -0.61
NEDD9-211ENST00000508546 BEX3Q00994 111 aa11.24□□□□□ -0.61
NEDD9-211ENST00000508546 CXCL17Q6UXB2 119 aa11.24□□□□□ -0.61
NEDD9-211ENST00000508546 TLK2Q86UE8 772 aa11.24□□□□□ -0.61
NEDD9-211ENST00000508546 GJD3Q8N144 294 aa11.24□□□□□ -0.61
NEDD9-211ENST00000508546 FAM133AQ8N9E0 248 aa11.24□□□□□ -0.61
NEDD9-211ENST00000508546 MKL1Q969V6 931 aa11.24□□□□□ -0.61
NEDD9-211ENST00000508546 KIFC2Q96AC6 838 aa11.24□□□□□ -0.61
NEDD9-211ENST00000508546 VWCEQ96DN2 955 aa11.24□□□□□ -0.61
NEDD9-211ENST00000508546 HAUS7Q99871 368 aa11.24□□□□□ -0.61
NEDD9-211ENST00000508546 WNT8AQ9H1J5 351 aa11.24□□□□□ -0.61
NEDD9-211ENST00000508546 BOLA2Q9H3K6 86 aa11.24□□□□□ -0.61
NEDD9-211ENST00000508546 CERS4Q9HA82 394 aa11.24□□□□□ -0.61
NEDD9-211ENST00000508546 RAVER2Q9HCJ3 691 aaKnown RBP11.24□□□□□ -0.61
NEDD9-211ENST00000508546 FEM1BQ9UK73 627 aa11.24□□□□□ -0.61
NEDD9-211ENST00000508546 Q9Y3F1 56 aa11.24□□□□□ -0.61
NEDD9-211ENST00000508546 SLC4A7Q9Y6M7 1214 aa11.24□□□□□ -0.61
NEDD9-211ENST00000508546 SCN10AQ9Y5Y9 1956 aa11.24□□□□□ -0.61
NEDD9-211ENST00000508546 GRIN2DO15399 1336 aa11.24□□□□□ -0.61
NEDD9-211ENST00000508546 DCHS1Q96JQ0 3298 aa11.24□□□□□ -0.61
NEDD9-211ENST00000508546 TANC1Q9C0D5 1861 aa11.23□□□□□ -0.61
NEDD9-211ENST00000508546 IGKV6D-41A0A0C4DH26 115 aa11.23□□□□□ -0.61
NEDD9-211ENST00000508546 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.23□□□□□ -0.61
NEDD9-211ENST00000508546 ZEB2O60315 1214 aa11.23□□□□□ -0.61
NEDD9-211ENST00000508546 ARHGEF15O94989 841 aa11.23□□□□□ -0.61
NEDD9-211ENST00000508546 CHGBP05060 677 aa11.23□□□□□ -0.61
NEDD9-211ENST00000508546 PFKMP08237 780 aa11.23□□□□□ -0.61
NEDD9-211ENST00000508546 SLC4A3P48751 1232 aa11.23□□□□□ -0.61
NEDD9-211ENST00000508546 CCL23P55773 120 aa11.23□□□□□ -0.61
NEDD9-211ENST00000508546 CNTN2Q02246 1040 aa11.23□□□□□ -0.61
NEDD9-211ENST00000508546 FSCN1Q16658 493 aaKnown RBP11.23□□□□□ -0.61
NEDD9-211ENST00000508546 GIMAP6Q6P9H5 292 aa11.23□□□□□ -0.61
NEDD9-211ENST00000508546 FAM178BQ8IXR5 827 aa11.23□□□□□ -0.61
NEDD9-211ENST00000508546 RPAP2Q8IXW5 612 aaPredicted RBP11.23□□□□□ -0.61
NEDD9-211ENST00000508546 AGBL1Q96MI9 1066 aa11.23□□□□□ -0.61
NEDD9-211ENST00000508546 PUS7LQ9H0K6 701 aaKnown RBP11.23□□□□□ -0.61
NEDD9-211ENST00000508546 MKNK2Q9HBH9 465 aa11.23□□□□□ -0.61
NEDD9-211ENST00000508546 PTPRSQ13332 1948 aa11.23□□□□□ -0.61
NEDD9-211ENST00000508546 ASB14A6NK59 587 aa11.22□□□□□ -0.61
NEDD9-211ENST00000508546 B4GALT4O60513 344 aa11.22□□□□□ -0.61
NEDD9-211ENST00000508546 RAB11FIP3O75154 756 aa11.22□□□□□ -0.61
NEDD9-211ENST00000508546 CACNA1HO95180 2353 aa11.22□□□□□ -0.61
NEDD9-211ENST00000508546 CA3P07451 260 aa11.22□□□□□ -0.61
NEDD9-211ENST00000508546 ATP2A2P16615 1042 aaKnown RBP11.22□□□□□ -0.61
NEDD9-211ENST00000508546 SSTR3P32745 418 aaPredicted RBP11.22□□□□□ -0.61
NEDD9-211ENST00000508546 IQSEC1Q6DN90 963 aa11.22□□□□□ -0.61
NEDD9-211ENST00000508546 ZSCAN25Q6NSZ9 544 aa11.22□□□□□ -0.61
NEDD9-211ENST00000508546 HFE2Q6ZVN8 426 aa11.22□□□□□ -0.61
NEDD9-211ENST00000508546 NOL8Q76FK4 1167 aaKnown RBP11.22□□□□□ -0.61
NEDD9-211ENST00000508546 GMCL1P1Q8NEA9 526 aa11.22□□□□□ -0.61
NEDD9-211ENST00000508546 PRSS33Q8NF86 280 aa11.22□□□□□ -0.61
NEDD9-211ENST00000508546 STRBPQ96SI9 672 aaKnown RBP11.22□□□□□ -0.61
NEDD9-211ENST00000508546 AP5M1Q9H0R1 490 aa11.22□□□□□ -0.61
NEDD9-211ENST00000508546 TRPV6Q9H1D0 765 aa11.22□□□□□ -0.61
NEDD9-211ENST00000508546 ACAD9Q9H845 621 aa11.22□□□□□ -0.61
NEDD9-211ENST00000508546 A1CFQ9NQ94 594 aaKnown RBP11.22□□□□□ -0.61
NEDD9-211ENST00000508546 CLIP2Q9UDT6 1046 aa11.22□□□□□ -0.61
NEDD9-211ENST00000508546 SOWAHBA6NEL2 793 aa11.21□□□□□ -0.61
NEDD9-211ENST00000508546 DYNC1LI2O43237 492 aaPredicted RBP11.21□□□□□ -0.61
NEDD9-211ENST00000508546 HMMRO75330 724 aa11.21□□□□□ -0.61
NEDD9-211ENST00000508546 ALADP13716 330 aa11.21□□□□□ -0.61
NEDD9-211ENST00000508546 TKFCQ3LXA3 575 aa11.21□□□□□ -0.61
NEDD9-211ENST00000508546 TMEM67Q5HYA8 995 aa11.21□□□□□ -0.61
NEDD9-211ENST00000508546 CEP95Q96GE4 821 aa11.21□□□□□ -0.61
NEDD9-211ENST00000508546 ZNF287Q9HBT7 754 aa11.21□□□□□ -0.61
NEDD9-211ENST00000508546 MTMR4Q9NYA4 1195 aa11.21□□□□□ -0.61
NEDD9-211ENST00000508546 PLIN4Q96Q06 1357 aa11.2□□□□□ -0.62
NEDD9-211ENST00000508546 ZNF536O15090 1300 aa11.2□□□□□ -0.62
NEDD9-211ENST00000508546 ZBBXA8MT70 800 aa11.2□□□□□ -0.62
NEDD9-211ENST00000508546 GSG1L2A8MUP6 293 aa11.2□□□□□ -0.62
NEDD9-211ENST00000508546 DCXO43602 365 aa11.2□□□□□ -0.62
NEDD9-211ENST00000508546 TTLL1O95922 423 aa11.2□□□□□ -0.62
NEDD9-211ENST00000508546 SUPT20HL2P0C7V6 817 aa11.2□□□□□ -0.62
NEDD9-211ENST00000508546 BMP3P12645 472 aa11.2□□□□□ -0.62
NEDD9-211ENST00000508546 IL9P15248 144 aa11.2□□□□□ -0.62
NEDD9-211ENST00000508546 SMPD1P17405 629 aa11.2□□□□□ -0.62
NEDD9-211ENST00000508546 TTLL4Q14679 1199 aa11.2□□□□□ -0.62
NEDD9-211ENST00000508546 TAPT1Q6NXT6 567 aa11.2□□□□□ -0.62
NEDD9-211ENST00000508546 SPRED2Q7Z698 418 aa11.2□□□□□ -0.62
NEDD9-211ENST00000508546 SIRT2Q8IXJ6 389 aa11.2□□□□□ -0.62
NEDD9-211ENST00000508546 ZNF444Q8N0Y2 327 aaPredicted RBP11.2□□□□□ -0.62
NEDD9-211ENST00000508546 PHOSPHO2Q8TCD6 241 aa11.2□□□□□ -0.62
NEDD9-211ENST00000508546 SCLYQ96I15 445 aa11.2□□□□□ -0.62
NEDD9-211ENST00000508546 ALDH8A1Q9H2A2 487 aaPredicted RBP11.2□□□□□ -0.62
NEDD9-211ENST00000508546 HOMER2Q9NSB8 354 aa11.2□□□□□ -0.62
NEDD9-211ENST00000508546 RNF146Q9NTX7 359 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms