RNA–Protein interactions for RNA: ENST00000508075.1

NEDD4-207, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 965 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-207ENST00000508075 FAM161BQ96MY7 647 aa16.98■□□□□ 0.31
NEDD4-207ENST00000508075 FBXO40Q9UH90 709 aa16.98■□□□□ 0.31
NEDD4-207ENST00000508075 NRBP1Q9UHY1 535 aa16.98■□□□□ 0.31
NEDD4-207ENST00000508075 MYH6P13533 1939 aa16.98■□□□□ 0.31
NEDD4-207ENST00000508075 RBAK-RBAKDNI3L0D1 243 aa16.97■□□□□ 0.31
NEDD4-207ENST00000508075 ZNF213O14771 459 aa16.97■□□□□ 0.31
NEDD4-207ENST00000508075 KDM4AO75164 1064 aa16.97■□□□□ 0.31
NEDD4-207ENST00000508075 SHHQ15465 462 aa16.97■□□□□ 0.31
NEDD4-207ENST00000508075 SLC30A10Q6XR72 485 aa16.97■□□□□ 0.31
NEDD4-207ENST00000508075 KLHDC9Q8NEP7 349 aa16.97■□□□□ 0.31
NEDD4-207ENST00000508075 RANBP17Q9H2T7 1088 aaKnown RBP16.97■□□□□ 0.31
NEDD4-207ENST00000508075 ZMYM6O95789 1325 aa16.96■□□□□ 0.31
NEDD4-207ENST00000508075 EPHB4P54760 987 aa16.96■□□□□ 0.31
NEDD4-207ENST00000508075 AAMPQ13685 434 aa16.96■□□□□ 0.31
NEDD4-207ENST00000508075 BAATQ14032 418 aaPredicted RBP16.96■□□□□ 0.31
NEDD4-207ENST00000508075 CCSAPQ6IQ19 270 aaPredicted RBP16.96■□□□□ 0.31
NEDD4-207ENST00000508075 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.96■□□□□ 0.31
NEDD4-207ENST00000508075 ZNF467Q7Z7K2 595 aaPredicted RBP16.96■□□□□ 0.31
NEDD4-207ENST00000508075 SKAP1Q86WV1 359 aa16.96■□□□□ 0.31
NEDD4-207ENST00000508075 PPP1R13LQ8WUF5 828 aa16.96■□□□□ 0.31
NEDD4-207ENST00000508075 VTI1AQ96AJ9 217 aa16.96■□□□□ 0.31
NEDD4-207ENST00000508075 ABHD16BQ9H3Z7 469 aa16.96■□□□□ 0.31
NEDD4-207ENST00000508075 STARD7Q9NQZ5 370 aa16.96■□□□□ 0.31
NEDD4-207ENST00000508075 CYP39A1Q9NYL5 469 aa16.96■□□□□ 0.31
NEDD4-207ENST00000508075 PTPDC1A2A3K4 754 aa16.95■□□□□ 0.3
NEDD4-207ENST00000508075 CTAGE5O15320 804 aa16.95■□□□□ 0.3
NEDD4-207ENST00000508075 PLA2G6O60733 806 aa16.95■□□□□ 0.3
NEDD4-207ENST00000508075 DUSP11O75319 330 aaKnown RBP16.95■□□□□ 0.3
NEDD4-207ENST00000508075 ICAM1P05362 532 aa16.95■□□□□ 0.3
NEDD4-207ENST00000508075 ASGR1P07306 291 aa16.95■□□□□ 0.3
NEDD4-207ENST00000508075 CALML3P27482 149 aa16.95■□□□□ 0.3
NEDD4-207ENST00000508075 ZNF543Q08ER8 600 aa16.95■□□□□ 0.3
NEDD4-207ENST00000508075 USH1GQ495M9 461 aa16.95■□□□□ 0.3
NEDD4-207ENST00000508075 MSL3Q8N5Y2 521 aaKnown RBP16.95■□□□□ 0.3
NEDD4-207ENST00000508075 DEFB123Q8N688 67 aa16.95■□□□□ 0.3
NEDD4-207ENST00000508075 TCP11L1Q9NUJ3 509 aa16.95■□□□□ 0.3
NEDD4-207ENST00000508075 CLTBP09497 229 aa16.94■□□□□ 0.3
NEDD4-207ENST00000508075 FDX1P10109 184 aa16.94■□□□□ 0.3
NEDD4-207ENST00000508075 SMPD1P17405 629 aa16.94■□□□□ 0.3
NEDD4-207ENST00000508075 LRIT3Q3SXY7 679 aa16.94■□□□□ 0.3
NEDD4-207ENST00000508075 GNASQ5JWF2 1037 aa16.94■□□□□ 0.3
NEDD4-207ENST00000508075 PPP4R3BQ5MIZ7 849 aa16.94■□□□□ 0.3
NEDD4-207ENST00000508075 TTC22Q5TAA0 569 aa16.94■□□□□ 0.3
NEDD4-207ENST00000508075 BTNL9Q6UXG8 535 aa16.94■□□□□ 0.3
NEDD4-207ENST00000508075 ESR2Q92731 530 aa16.94■□□□□ 0.3
NEDD4-207ENST00000508075 TAF6LQ9Y6J9 622 aa16.94■□□□□ 0.3
NEDD4-207ENST00000508075 MFAP1P55081 439 aaKnown RBP16.93■□□□□ 0.3
NEDD4-207ENST00000508075 TNFAIP2Q03169 654 aa16.93■□□□□ 0.3
NEDD4-207ENST00000508075 PTH1RQ03431 593 aa16.93■□□□□ 0.3
NEDD4-207ENST00000508075 FAAP100Q0VG06 881 aa16.93■□□□□ 0.3
NEDD4-207ENST00000508075 TKFCQ3LXA3 575 aa16.93■□□□□ 0.3
NEDD4-207ENST00000508075 CXCL17Q6UXB2 119 aa16.93■□□□□ 0.3
NEDD4-207ENST00000508075 CLEC4DQ8WXI8 215 aa16.93■□□□□ 0.3
NEDD4-207ENST00000508075 TBC1D5Q92609 795 aa16.93■□□□□ 0.3
NEDD4-207ENST00000508075 VAT1LQ9HCJ6 419 aa16.93■□□□□ 0.3
NEDD4-207ENST00000508075 TMEM39AQ9NV64 488 aa16.93■□□□□ 0.3
NEDD4-207ENST00000508075 ZSWIM5Q9P217 1185 aa16.93■□□□□ 0.3
NEDD4-207ENST00000508075 LAMA3Q16787 3333 aa16.92■□□□□ 0.3
NEDD4-207ENST00000508075 DYNC1LI2O43237 492 aaPredicted RBP16.92■□□□□ 0.3
NEDD4-207ENST00000508075 GJA9P57773 515 aa16.92■□□□□ 0.3
NEDD4-207ENST00000508075 PSMC6P62333 389 aa16.92■□□□□ 0.3
NEDD4-207ENST00000508075 TAPT1Q6NXT6 567 aa16.92■□□□□ 0.3
NEDD4-207ENST00000508075 CYB5R4Q7L1T6 521 aa16.92■□□□□ 0.3
NEDD4-207ENST00000508075 UPF3AQ9H1J1 476 aaKnown RBP16.92■□□□□ 0.3
NEDD4-207ENST00000508075 RNF41Q9H4P4 317 aaPredicted RBP16.92■□□□□ 0.3
NEDD4-207ENST00000508075 ASB14A6NK59 587 aa16.91■□□□□ 0.3
NEDD4-207ENST00000508075 SNHG28P0DPA3 235 aa16.91■□□□□ 0.3
NEDD4-207ENST00000508075 RAG1P15918 1043 aa16.91■□□□□ 0.3
NEDD4-207ENST00000508075 ALDH5A1P51649 535 aaPredicted RBP16.91■□□□□ 0.3
NEDD4-207ENST00000508075 C1QBPQ07021 282 aaKnown RBP16.91■□□□□ 0.3
NEDD4-207ENST00000508075 KIAA1211Q6ZU35 1233 aa16.91■□□□□ 0.3
NEDD4-207ENST00000508075 TLK2Q86UE8 772 aa16.91■□□□□ 0.3
NEDD4-207ENST00000508075 ENAHQ8N8S7 591 aaPredicted RBP16.91■□□□□ 0.3
NEDD4-207ENST00000508075 PNMA1Q8ND90 353 aa16.91■□□□□ 0.3
NEDD4-207ENST00000508075 ZSCAN10Q96SZ4 725 aaPredicted RBP16.91■□□□□ 0.3
NEDD4-207ENST00000508075 TSEN34Q9BSV6 310 aaKnown RBP16.91■□□□□ 0.3
NEDD4-207ENST00000508075 DSCC1Q9BVC3 393 aa16.91■□□□□ 0.3
NEDD4-207ENST00000508075 PPP1R12CQ9BZL4 782 aa16.91■□□□□ 0.3
NEDD4-207ENST00000508075 KAT14Q9H8E8 782 aa16.91■□□□□ 0.3
NEDD4-207ENST00000508075 GNEQ9Y223 722 aaKnown RBP16.91■□□□□ 0.3
NEDD4-207ENST00000508075 TNKSO95271 1327 aa16.91■□□□□ 0.3
NEDD4-207ENST00000508075 BAZ2BQ9UIF8 2168 aaKnown RBP16.91■□□□□ 0.3
NEDD4-207ENST00000508075 IMMTQ16891 758 aaKnown RBP16.9■□□□□ 0.3
NEDD4-207ENST00000508075 C1orf53Q5VUE5 145 aa16.9■□□□□ 0.3
NEDD4-207ENST00000508075 STAG2Q8N3U4 1231 aa16.9■□□□□ 0.3
NEDD4-207ENST00000508075 COPS5Q92905 334 aa16.9■□□□□ 0.3
NEDD4-207ENST00000508075 GLT1D1Q96MS3 346 aa16.9■□□□□ 0.3
NEDD4-207ENST00000508075 SPC25Q9HBM1 224 aa16.9■□□□□ 0.3
NEDD4-207ENST00000508075 SENP2Q9HC62 589 aa16.9■□□□□ 0.3
NEDD4-207ENST00000508075 MTMR10Q9NXD2 777 aa16.9■□□□□ 0.3
NEDD4-207ENST00000508075 MOXD2PA6NHM9 499 aa16.89■□□□□ 0.29
NEDD4-207ENST00000508075 HIP1O00291 1037 aa16.89■□□□□ 0.29
NEDD4-207ENST00000508075 DHX16O60231 1041 aaKnown RBP16.89■□□□□ 0.29
NEDD4-207ENST00000508075 CST5P28325 142 aaPredicted RBP16.89■□□□□ 0.29
NEDD4-207ENST00000508075 CDC37Q16543 378 aaPredicted RBP16.89■□□□□ 0.29
NEDD4-207ENST00000508075 RNF207Q6ZRF8 634 aa16.89■□□□□ 0.29
NEDD4-207ENST00000508075 CHST3Q7LGC8 479 aa16.89■□□□□ 0.29
NEDD4-207ENST00000508075 ADGRF4Q8IZF3 695 aa16.89■□□□□ 0.29
NEDD4-207ENST00000508075 NUP133Q8WUM0 1156 aa16.89■□□□□ 0.29
NEDD4-207ENST00000508075 TTC14Q96N46 770 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms