RNA–Protein interactions for RNA: ENST00000507485.1

RPS3A-206, Transcript of ribosomal protein S3A, humanhuman

TSL 1 (best)

Gene RPS3A, Length 1,526 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-206ENST00000507485 RAD21O60216 631 aa10.79□□□□□ -0.68
RPS3A-206ENST00000507485 SLC25A27O95847 323 aa10.79□□□□□ -0.68
RPS3A-206ENST00000507485 DNAJB2P25686 324 aa10.79□□□□□ -0.68
RPS3A-206ENST00000507485 TLE2Q04725 743 aa10.79□□□□□ -0.68
RPS3A-206ENST00000507485 SBK1Q52WX2 424 aa10.79□□□□□ -0.68
RPS3A-206ENST00000507485 FGD4Q96M96 766 aa10.79□□□□□ -0.68
RPS3A-206ENST00000507485 LBHD1Q9BQE6 289 aaPredicted RBP10.79□□□□□ -0.68
RPS3A-206ENST00000507485 TINF2Q9BSI4 451 aa10.79□□□□□ -0.68
RPS3A-206ENST00000507485 XPNPEP3Q9NQH7 507 aa10.79□□□□□ -0.68
RPS3A-206ENST00000507485 PRDM5Q9NQX1 630 aaPredicted RBP10.79□□□□□ -0.68
RPS3A-206ENST00000507485 PHF24Q9UPV7 400 aa10.79□□□□□ -0.68
RPS3A-206ENST00000507485 MYH4Q9Y623 1939 aa10.79□□□□□ -0.68
RPS3A-206ENST00000507485 MYADML2A6NDP7 307 aa10.79□□□□□ -0.68
RPS3A-206ENST00000507485 ADAMTS4O75173 837 aa10.79□□□□□ -0.68
RPS3A-206ENST00000507485 PRDM1O75626 825 aa10.79□□□□□ -0.68
RPS3A-206ENST00000507485 SNAI1O95863 264 aaPredicted RBP10.79□□□□□ -0.68
RPS3A-206ENST00000507485 NDUFB10O96000 172 aa10.79□□□□□ -0.68
RPS3A-206ENST00000507485 C1orf53Q5VUE5 145 aa10.79□□□□□ -0.68
RPS3A-206ENST00000507485 FAM109BQ6ICB4 259 aaPredicted RBP10.79□□□□□ -0.68
RPS3A-206ENST00000507485 KBTBD3Q8NAB2 608 aa10.79□□□□□ -0.68
RPS3A-206ENST00000507485 SEC62Q99442 399 aaKnown RBP10.79□□□□□ -0.68
RPS3A-206ENST00000507485 TTYH1Q9H313 450 aaPredicted RBP10.79□□□□□ -0.68
RPS3A-206ENST00000507485 ECHDC1Q9NTX5 307 aa10.79□□□□□ -0.68
RPS3A-206ENST00000507485 ARPP21Q9UBL0 812 aaPredicted RBP10.79□□□□□ -0.68
RPS3A-206ENST00000507485 MCM3APO60318 1980 aa10.78□□□□□ -0.68
RPS3A-206ENST00000507485 UNC80Q8N2C7 3258 aa10.78□□□□□ -0.68
RPS3A-206ENST00000507485 DNAJC25-GNG10A0A024R161 153 aa10.78□□□□□ -0.68
RPS3A-206ENST00000507485 A0A1W2PQ45 241 aaPredicted RBP10.78□□□□□ -0.68
RPS3A-206ENST00000507485 A0A1W2PQY0 241 aa10.78□□□□□ -0.68
RPS3A-206ENST00000507485 MINDY4BA8MYZ0 360 aa10.78□□□□□ -0.68
RPS3A-206ENST00000507485 F5H6K3 240 aa10.78□□□□□ -0.68
RPS3A-206ENST00000507485 KLRC3Q07444 240 aa10.78□□□□□ -0.68
RPS3A-206ENST00000507485 KCTD2Q14681 263 aa10.78□□□□□ -0.68
RPS3A-206ENST00000507485 SNRNP48Q6IEG0 339 aaKnown RBP10.78□□□□□ -0.68
RPS3A-206ENST00000507485 OTUD7AQ8TE49 926 aaPredicted RBP10.78□□□□□ -0.68
RPS3A-206ENST00000507485 SLF1Q9BQI6 1058 aa10.78□□□□□ -0.68
RPS3A-206ENST00000507485 DCTPP1Q9H773 170 aa10.78□□□□□ -0.68
RPS3A-206ENST00000507485 GOPCQ9HD26 462 aa10.78□□□□□ -0.68
RPS3A-206ENST00000507485 SLC5A4Q9NY91 659 aa10.78□□□□□ -0.68
RPS3A-206ENST00000507485 NYAP2Q9P242 653 aa10.78□□□□□ -0.68
RPS3A-206ENST00000507485 DIS3Q9Y2L1 958 aaKnown RBP10.78□□□□□ -0.68
RPS3A-206ENST00000507485 SYNRGQ9UMZ2 1314 aa10.77□□□□□ -0.68
RPS3A-206ENST00000507485 FOXP2O15409 715 aa10.77□□□□□ -0.69
RPS3A-206ENST00000507485 RNF113AO15541 343 aaKnown RBP10.77□□□□□ -0.69
RPS3A-206ENST00000507485 GPAA1O43292 621 aa10.77□□□□□ -0.69
RPS3A-206ENST00000507485 TLL1O43897 1013 aa10.77□□□□□ -0.69
RPS3A-206ENST00000507485 RARBP10826 455 aa10.77□□□□□ -0.69
RPS3A-206ENST00000507485 ZNF697Q5TEC3 545 aa10.77□□□□□ -0.69
RPS3A-206ENST00000507485 CCSAPQ6IQ19 270 aaPredicted RBP10.77□□□□□ -0.69
RPS3A-206ENST00000507485 ZSCAN25Q6NSZ9 544 aa10.77□□□□□ -0.69
RPS3A-206ENST00000507485 APPBP2Q92624 585 aa10.77□□□□□ -0.69
RPS3A-206ENST00000507485 RAVER2Q9HCJ3 691 aaKnown RBP10.77□□□□□ -0.69
RPS3A-206ENST00000507485 CLIP2Q9UDT6 1046 aa10.77□□□□□ -0.69
RPS3A-206ENST00000507485 PRKAG2Q9UGJ0 569 aa10.77□□□□□ -0.69
RPS3A-206ENST00000507485 NRBP1Q9UHY1 535 aa10.77□□□□□ -0.69
RPS3A-206ENST00000507485 TACC3Q9Y6A5 838 aa10.77□□□□□ -0.69
RPS3A-206ENST00000507485 EYSQ5T1H1 3165 aa10.76□□□□□ -0.69
RPS3A-206ENST00000507485 FAM187AA6NFU0 413 aa10.76□□□□□ -0.69
RPS3A-206ENST00000507485 PTGS1P23219 599 aa10.76□□□□□ -0.69
RPS3A-206ENST00000507485 RASGRP2Q7LDG7 609 aa10.76□□□□□ -0.69
RPS3A-206ENST00000507485 AMOTL1Q8IY63 956 aa10.76□□□□□ -0.69
RPS3A-206ENST00000507485 CPXCR1Q8N123 301 aa10.76□□□□□ -0.69
RPS3A-206ENST00000507485 LRRC47Q8N1G4 583 aaKnown RBP10.76□□□□□ -0.69
RPS3A-206ENST00000507485 KLHDC9Q8NEP7 349 aa10.76□□□□□ -0.69
RPS3A-206ENST00000507485 CEP95Q96GE4 821 aa10.76□□□□□ -0.69
RPS3A-206ENST00000507485 DDRGK1Q96HY6 314 aa10.76□□□□□ -0.69
RPS3A-206ENST00000507485 CDX2Q99626 313 aaPredicted RBP10.76□□□□□ -0.69
RPS3A-206ENST00000507485 COL25A1Q9BXS0 654 aaPredicted RBP10.76□□□□□ -0.69
RPS3A-206ENST00000507485 TEX13BQ9BXU2 312 aa10.76□□□□□ -0.69
RPS3A-206ENST00000507485 DDX49Q9Y6V7 483 aaKnown RBP10.76□□□□□ -0.69
RPS3A-206ENST00000507485 ATP2A1O14983 1001 aa10.75□□□□□ -0.69
RPS3A-206ENST00000507485 ACTN4O43707 911 aaKnown RBP10.75□□□□□ -0.69
RPS3A-206ENST00000507485 PQBP1O60828 265 aaKnown RBP10.75□□□□□ -0.69
RPS3A-206ENST00000507485 S1PR4O95977 384 aa10.75□□□□□ -0.69
RPS3A-206ENST00000507485 AKR1A1P14550 325 aa10.75□□□□□ -0.69
RPS3A-206ENST00000507485 ACLYP53396 1101 aa10.75□□□□□ -0.69
RPS3A-206ENST00000507485 FAAP100Q0VG06 881 aa10.75□□□□□ -0.69
RPS3A-206ENST00000507485 GIMAP6Q6P9H5 292 aa10.75□□□□□ -0.69
RPS3A-206ENST00000507485 MAMDC4Q6UXC1 1216 aa10.75□□□□□ -0.69
RPS3A-206ENST00000507485 PI4K2BQ8TCG2 481 aa10.75□□□□□ -0.69
RPS3A-206ENST00000507485 MKL1Q969V6 931 aa10.75□□□□□ -0.69
RPS3A-206ENST00000507485 CHMP4CQ96CF2 233 aa10.75□□□□□ -0.69
RPS3A-206ENST00000507485 KATNBL1Q9H079 304 aa10.75□□□□□ -0.69
RPS3A-206ENST00000507485 SEMA6BQ9H3T3 888 aa10.75□□□□□ -0.69
RPS3A-206ENST00000507485 MKNK2Q9HBH9 465 aa10.75□□□□□ -0.69
RPS3A-206ENST00000507485 SLC38A10Q9HBR0 1119 aa10.75□□□□□ -0.69
RPS3A-206ENST00000507485 INCENPQ9NQS7 918 aa10.75□□□□□ -0.69
RPS3A-206ENST00000507485 MTMR4Q9NYA4 1195 aa10.75□□□□□ -0.69
RPS3A-206ENST00000507485 PCDHB15Q9Y5E8 787 aa10.75□□□□□ -0.69
RPS3A-206ENST00000507485 LRRC37A2A6NM11 1700 aa10.75□□□□□ -0.69
RPS3A-206ENST00000507485 CDH23Q9H251 3354 aa10.75□□□□□ -0.69
RPS3A-206ENST00000507485 KIAA0355O15063 1070 aa10.74□□□□□ -0.69
RPS3A-206ENST00000507485 CTAGE5O15320 804 aa10.74□□□□□ -0.69
RPS3A-206ENST00000507485 GDF9O60383 454 aa10.74□□□□□ -0.69
RPS3A-206ENST00000507485 CLTBP09497 229 aa10.74□□□□□ -0.69
RPS3A-206ENST00000507485 CNTN2Q02246 1040 aa10.74□□□□□ -0.69
RPS3A-206ENST00000507485 KCNA10Q16322 511 aa10.74□□□□□ -0.69
RPS3A-206ENST00000507485 LIAT1Q6ZQX7 453 aa10.74□□□□□ -0.69
RPS3A-206ENST00000507485 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.74□□□□□ -0.69
RPS3A-206ENST00000507485 RNF180Q86T96 592 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 754.5 ms