RNA–Protein interactions for RNA: ENST00000507215.5

NR1I3-224, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 620 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-224ENST00000507215 GRM2Q14416 872 aa8.66□□□□□ -1.02
NR1I3-224ENST00000507215 GRIK4Q16099 956 aa8.66□□□□□ -1.02
NR1I3-224ENST00000507215 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.66□□□□□ -1.02
NR1I3-224ENST00000507215 CCDC152Q4G0S7 254 aa8.66□□□□□ -1.02
NR1I3-224ENST00000507215 TMCO4Q5TGY1 634 aa8.66□□□□□ -1.02
NR1I3-224ENST00000507215 VN1R5Q7Z5H4 357 aa8.66□□□□□ -1.02
NR1I3-224ENST00000507215 SLC51AQ86UW1 340 aa8.66□□□□□ -1.02
NR1I3-224ENST00000507215 APOBEC3FQ8IUX4 373 aaKnown RBP8.66□□□□□ -1.02
NR1I3-224ENST00000507215 FMR1NBQ8N0W7 255 aaPredicted RBP8.66□□□□□ -1.02
NR1I3-224ENST00000507215 ERO1AQ96HE7 468 aa8.66□□□□□ -1.02
NR1I3-224ENST00000507215 GMLQ99445 158 aa8.66□□□□□ -1.02
NR1I3-224ENST00000507215 THUMPD2Q9BTF0 503 aaKnown RBP8.66□□□□□ -1.02
NR1I3-224ENST00000507215 HYPKQ9NX55 129 aa8.66□□□□□ -1.02
NR1I3-224ENST00000507215 NOP53Q9NZM5 478 aaKnown RBP8.66□□□□□ -1.02
NR1I3-224ENST00000507215 PPME1Q9Y570 386 aa8.66□□□□□ -1.02
NR1I3-224ENST00000507215 MKI67P46013 3256 aaKnown RBP8.66□□□□□ -1.02
NR1I3-224ENST00000507215 SCN9AQ15858 1988 aa8.66□□□□□ -1.02
NR1I3-224ENST00000507215 IRS4O14654 1257 aaPredicted RBP8.65□□□□□ -1.02
NR1I3-224ENST00000507215 PROSER3Q2NL68 480 aa8.65□□□□□ -1.02
NR1I3-224ENST00000507215 DLK2Q6UY11 383 aa8.65□□□□□ -1.02
NR1I3-224ENST00000507215 ZBTB38Q8NAP3 1195 aaPredicted RBP8.65□□□□□ -1.02
NR1I3-224ENST00000507215 GALNT11Q8NCW6 608 aa8.65□□□□□ -1.02
NR1I3-224ENST00000507215 ASAP3Q8TDY4 903 aa8.65□□□□□ -1.02
NR1I3-224ENST00000507215 FAM89AQ96GI7 184 aa8.65□□□□□ -1.02
NR1I3-224ENST00000507215 PPP2R3BQ9Y5P8 575 aa8.65□□□□□ -1.02
NR1I3-224ENST00000507215 TAF1P21675 1872 aa8.65□□□□□ -1.02
NR1I3-224ENST00000507215 MED23Q9ULK4 1368 aa8.64□□□□□ -1.03
NR1I3-224ENST00000507215 PIK3R2O00459 728 aa8.64□□□□□ -1.03
NR1I3-224ENST00000507215 GADD45BO75293 160 aaPredicted RBP8.64□□□□□ -1.03
NR1I3-224ENST00000507215 GDF11O95390 407 aa8.64□□□□□ -1.03
NR1I3-224ENST00000507215 RIPK4P57078 832 aa8.64□□□□□ -1.03
NR1I3-224ENST00000507215 STRIP1Q5VSL9 837 aa8.64□□□□□ -1.03
NR1I3-224ENST00000507215 SHISA2Q6UWI4 295 aa8.64□□□□□ -1.03
NR1I3-224ENST00000507215 FBXO33Q7Z6M2 555 aa8.64□□□□□ -1.03
NR1I3-224ENST00000507215 NBPF11Q86T75 865 aa8.64□□□□□ -1.03
NR1I3-224ENST00000507215 FBXO11Q86XK2 927 aa8.64□□□□□ -1.03
NR1I3-224ENST00000507215 ARMC5Q96C12 935 aa8.64□□□□□ -1.03
NR1I3-224ENST00000507215 CDC5LQ99459 802 aaKnown RBP8.64□□□□□ -1.03
NR1I3-224ENST00000507215 EHD4Q9H223 541 aa8.64□□□□□ -1.03
NR1I3-224ENST00000507215 ABCB6Q9NP58 842 aa8.64□□□□□ -1.03
NR1I3-224ENST00000507215 TRIM17Q9Y577 477 aa8.64□□□□□ -1.03
NR1I3-224ENST00000507215 HTTP42858 3142 aa8.64□□□□□ -1.03
NR1I3-224ENST00000507215 LAMB1P07942 1786 aa8.63□□□□□ -1.03
NR1I3-224ENST00000507215 A0A096LPE4 126 aa8.63□□□□□ -1.03
NR1I3-224ENST00000507215 A0A1W2PPZ6 126 aa8.63□□□□□ -1.03
NR1I3-224ENST00000507215 UBE2Q2LH0YL09 131 aa8.63□□□□□ -1.03
NR1I3-224ENST00000507215 LDHBP07195 334 aaKnown RBP8.63□□□□□ -1.03
NR1I3-224ENST00000507215 SELPP16109 830 aa8.63□□□□□ -1.03
NR1I3-224ENST00000507215 MFAP1P55081 439 aaKnown RBP8.63□□□□□ -1.03
NR1I3-224ENST00000507215 MAP3K11Q16584 847 aa8.63□□□□□ -1.03
NR1I3-224ENST00000507215 LDLRAD1Q5T700 205 aa8.63□□□□□ -1.03
NR1I3-224ENST00000507215 ANKRD18AQ8IVF6 992 aa8.63□□□□□ -1.03
NR1I3-224ENST00000507215 CCDC191Q8NCU4 936 aa8.63□□□□□ -1.03
NR1I3-224ENST00000507215 BSNDQ8WZ55 320 aa8.63□□□□□ -1.03
NR1I3-224ENST00000507215 BCO2Q9BYV7 579 aa8.63□□□□□ -1.03
NR1I3-224ENST00000507215 COA1Q9GZY4 146 aa8.63□□□□□ -1.03
NR1I3-224ENST00000507215 KCNQ5Q9NR82 932 aa8.63□□□□□ -1.03
NR1I3-224ENST00000507215 KCNK4Q9NYG8 393 aa8.63□□□□□ -1.03
NR1I3-224ENST00000507215 CEP290O15078 2479 aa8.62□□□□□ -1.03
NR1I3-224ENST00000507215 ASTN2O75129 1339 aaPredicted RBP8.62□□□□□ -1.03
NR1I3-224ENST00000507215 CHL1O00533 1208 aa8.62□□□□□ -1.03
NR1I3-224ENST00000507215 WNT10BO00744 389 aa8.62□□□□□ -1.03
NR1I3-224ENST00000507215 PDE8AO60658 829 aa8.62□□□□□ -1.03
NR1I3-224ENST00000507215 WDHD1O75717 1129 aaPredicted RBP8.62□□□□□ -1.03
NR1I3-224ENST00000507215 ANXA1P04083 346 aa8.62□□□□□ -1.03
NR1I3-224ENST00000507215 PCCAP05165 728 aaPredicted RBP8.62□□□□□ -1.03
NR1I3-224ENST00000507215 SPATA31C1P0DKV0 1188 aa8.62□□□□□ -1.03
NR1I3-224ENST00000507215 CHRNA4P43681 627 aa8.62□□□□□ -1.03
NR1I3-224ENST00000507215 FXR1P51114 621 aaKnown RBP eCLIP8.62□□□□□ -1.03
NR1I3-224ENST00000507215 COL19A1Q14993 1142 aa8.62□□□□□ -1.03
NR1I3-224ENST00000507215 NXPE4Q6UWF7 544 aa8.62□□□□□ -1.03
NR1I3-224ENST00000507215 OTOP1Q7RTM1 612 aa8.62□□□□□ -1.03
NR1I3-224ENST00000507215 CACTIN-AS1Q8N1I8 211 aa8.62□□□□□ -1.03
NR1I3-224ENST00000507215 TMEM151AQ8N4L1 468 aa8.62□□□□□ -1.03
NR1I3-224ENST00000507215 DTWD1Q8N5C7 304 aa8.62□□□□□ -1.03
NR1I3-224ENST00000507215 OSBPL7Q9BZF2 842 aa8.62□□□□□ -1.03
NR1I3-224ENST00000507215 CHPF2Q9P2E5 772 aa8.62□□□□□ -1.03
NR1I3-224ENST00000507215 PTPN22Q9Y2R2 807 aa8.62□□□□□ -1.03
NR1I3-224ENST00000507215 CENPFP49454 3210 aa8.62□□□□□ -1.03
NR1I3-224ENST00000507215 SPDYE3A6NKU9 549 aa8.61□□□□□ -1.03
NR1I3-224ENST00000507215 DLL1O00548 723 aa8.61□□□□□ -1.03
NR1I3-224ENST00000507215 SOX1O00570 391 aaPredicted RBP8.61□□□□□ -1.03
NR1I3-224ENST00000507215 FSCN2O14926 492 aa8.61□□□□□ -1.03
NR1I3-224ENST00000507215 MYO1BO43795 1136 aa8.61□□□□□ -1.03
NR1I3-224ENST00000507215 DDX58O95786 925 aaKnown RBP8.61□□□□□ -1.03
NR1I3-224ENST00000507215 RAC1P63000 192 aa8.61□□□□□ -1.03
NR1I3-224ENST00000507215 ZNF423Q2M1K9 1284 aa8.61□□□□□ -1.03
NR1I3-224ENST00000507215 SUPT20HL1Q3ZLR7 823 aa8.61□□□□□ -1.03
NR1I3-224ENST00000507215 PRRT3Q5FWE3 981 aa8.61□□□□□ -1.03
NR1I3-224ENST00000507215 DACT2Q5SW24 774 aa8.61□□□□□ -1.03
NR1I3-224ENST00000507215 CD163Q86VB7 1156 aa8.61□□□□□ -1.03
NR1I3-224ENST00000507215 BSDC1Q9NW68 430 aaPredicted RBP8.61□□□□□ -1.03
NR1I3-224ENST00000507215 LEMD3Q9Y2U8 911 aa8.61□□□□□ -1.03
NR1I3-224ENST00000507215 TMEM238LA0A1B0GVL6 79 aa8.6□□□□□ -1.03
NR1I3-224ENST00000507215 H3BRJ5 948 aa8.6□□□□□ -1.03
NR1I3-224ENST00000507215 DDX3YO15523 660 aaKnown RBP8.6□□□□□ -1.03
NR1I3-224ENST00000507215 ELNP15502 786 aa8.6□□□□□ -1.03
NR1I3-224ENST00000507215 ITPKAP23677 461 aa8.6□□□□□ -1.03
NR1I3-224ENST00000507215 TMPOP42166 694 aaKnown RBP8.6□□□□□ -1.03
NR1I3-224ENST00000507215 IREB2P48200 963 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms