RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 A1CFQ9NQ94 594 aaKnown RBP21.14■□□□□ 0.97
NPHP4-210ENST00000506941 BIN2Q9UBW5 565 aaPredicted RBP21.14■□□□□ 0.97
NPHP4-210ENST00000506941 NFIBO00712 420 aa21.13■□□□□ 0.97
NPHP4-210ENST00000506941 ZBTB43O43298 467 aa21.13■□□□□ 0.97
NPHP4-210ENST00000506941 PPP1R11O60927 126 aaPredicted RBP21.13■□□□□ 0.97
NPHP4-210ENST00000506941 ZNF792Q3KQV3 632 aa21.13■□□□□ 0.97
NPHP4-210ENST00000506941 USH1GQ495M9 461 aa21.13■□□□□ 0.97
NPHP4-210ENST00000506941 CMTR1Q8N1G2 835 aaKnown RBP21.13■□□□□ 0.97
NPHP4-210ENST00000506941 SRBD1Q8N5C6 995 aaKnown RBP21.13■□□□□ 0.97
NPHP4-210ENST00000506941 CLEC4DQ8WXI8 215 aa21.13■□□□□ 0.97
NPHP4-210ENST00000506941 PIGSQ96S52 555 aa21.13■□□□□ 0.97
NPHP4-210ENST00000506941 SPZ1Q9BXG8 430 aa21.13■□□□□ 0.97
NPHP4-210ENST00000506941 ZBTB5O15062 677 aa21.12■□□□□ 0.97
NPHP4-210ENST00000506941 SYNE3Q6ZMZ3 975 aa21.12■□□□□ 0.97
NPHP4-210ENST00000506941 HOMER1Q86YM7 354 aa21.12■□□□□ 0.97
NPHP4-210ENST00000506941 TRMT44Q8IYL2 757 aaKnown RBP21.12■□□□□ 0.97
NPHP4-210ENST00000506941 ANKRD35Q8N283 1001 aa21.12■□□□□ 0.97
NPHP4-210ENST00000506941 MAML3Q96JK9 1138 aa21.12■□□□□ 0.97
NPHP4-210ENST00000506941 FGD4Q96M96 766 aa21.12■□□□□ 0.97
NPHP4-210ENST00000506941 GOLGA8BA8MQT2 603 aa21.11■□□□□ 0.97
NPHP4-210ENST00000506941 MAP3K21Q5TCX8 1036 aa21.11■□□□□ 0.97
NPHP4-210ENST00000506941 TMTC3Q6ZXV5 915 aa21.11■□□□□ 0.97
NPHP4-210ENST00000506941 FBXO11Q86XK2 927 aa21.11■□□□□ 0.97
NPHP4-210ENST00000506941 DDX11Q96FC9 970 aa21.11■□□□□ 0.97
NPHP4-210ENST00000506941 UNC93B1Q9H1C4 597 aa21.11■□□□□ 0.97
NPHP4-210ENST00000506941 FAM217BQ9NTX9 383 aaPredicted RBP21.11■□□□□ 0.97
NPHP4-210ENST00000506941 PNMA2Q9UL42 364 aa21.11■□□□□ 0.97
NPHP4-210ENST00000506941 NID2Q14112 1375 aa21.1■□□□□ 0.97
NPHP4-210ENST00000506941 MKI67P46013 3256 aaKnown RBP21.1■□□□□ 0.97
NPHP4-210ENST00000506941 GOLGA8AA7E2F4 631 aa21.1■□□□□ 0.97
NPHP4-210ENST00000506941 CAPN15O75808 1086 aa21.1■□□□□ 0.97
NPHP4-210ENST00000506941 CCL5P13501 91 aa21.1■□□□□ 0.97
NPHP4-210ENST00000506941 SMARCA1P28370 1054 aa21.1■□□□□ 0.97
NPHP4-210ENST00000506941 RCAN1P53805 252 aa21.1■□□□□ 0.97
NPHP4-210ENST00000506941 EVCP57679 992 aa21.1■□□□□ 0.97
NPHP4-210ENST00000506941 UBXN2AP68543 259 aa21.1■□□□□ 0.97
NPHP4-210ENST00000506941 CNTN2Q02246 1040 aa21.1■□□□□ 0.97
NPHP4-210ENST00000506941 CACNB2Q08289 660 aaPredicted RBP21.1■□□□□ 0.97
NPHP4-210ENST00000506941 RTN1Q16799 776 aa21.1■□□□□ 0.97
NPHP4-210ENST00000506941 OLFML2BQ68BL8 750 aa21.1■□□□□ 0.97
NPHP4-210ENST00000506941 NSMFQ6X4W1 530 aa21.1■□□□□ 0.97
NPHP4-210ENST00000506941 PIBF1Q8WXW3 757 aa21.1■□□□□ 0.97
NPHP4-210ENST00000506941 LZTS2Q9BRK4 669 aa21.1■□□□□ 0.97
NPHP4-210ENST00000506941 PDRG1Q9NUG6 133 aa21.1■□□□□ 0.97
NPHP4-210ENST00000506941 SLC5A4Q9NY91 659 aa21.1■□□□□ 0.97
NPHP4-210ENST00000506941 CYP39A1Q9NYL5 469 aa21.1■□□□□ 0.97
NPHP4-210ENST00000506941 NAP1L2Q9ULW6 460 aaPredicted RBP21.1■□□□□ 0.97
NPHP4-210ENST00000506941 PFASO15067 1338 aa21.09■□□□□ 0.97
NPHP4-210ENST00000506941 ABCB11O95342 1321 aa21.09■□□□□ 0.97
NPHP4-210ENST00000506941 PRKAR2AP13861 404 aaKnown RBP21.09■□□□□ 0.97
NPHP4-210ENST00000506941 CDC27P30260 824 aa21.09■□□□□ 0.97
NPHP4-210ENST00000506941 CYP2C19P33261 490 aa21.09■□□□□ 0.97
NPHP4-210ENST00000506941 GNAQP50148 359 aa21.09■□□□□ 0.97
NPHP4-210ENST00000506941 SOX10P56693 466 aa21.09■□□□□ 0.97
NPHP4-210ENST00000506941 FAM133AQ8N9E0 248 aa21.09■□□□□ 0.97
NPHP4-210ENST00000506941 LARP6Q9BRS8 491 aaKnown RBP21.09■□□□□ 0.97
NPHP4-210ENST00000506941 AMNQ9BXJ7 453 aa21.09■□□□□ 0.97
NPHP4-210ENST00000506941 DIS3Q9Y2L1 958 aaKnown RBP21.09■□□□□ 0.97
NPHP4-210ENST00000506941 ASTN1O14525 1302 aa21.08■□□□□ 0.97
NPHP4-210ENST00000506941 CNTNAP5Q8WYK1 1306 aa21.08■□□□□ 0.97
NPHP4-210ENST00000506941 KIAA1217Q5T5P2 1943 aa21.08■□□□□ 0.97
NPHP4-210ENST00000506941 PNMA6FA0A0J9YX94 578 aa21.08■□□□□ 0.97
NPHP4-210ENST00000506941 FUT2Q10981 343 aa21.08■□□□□ 0.97
NPHP4-210ENST00000506941 SLC30A10Q6XR72 485 aa21.08■□□□□ 0.97
NPHP4-210ENST00000506941 CCDC82Q8N4S0 544 aa21.08■□□□□ 0.97
NPHP4-210ENST00000506941 PURBQ96QR8 312 aaKnown RBP21.08■□□□□ 0.97
NPHP4-210ENST00000506941 RBM28Q9NW13 759 aaKnown RBP21.08■□□□□ 0.97
NPHP4-210ENST00000506941 POTEFA5A3E0 1075 aa21.07■□□□□ 0.96
NPHP4-210ENST00000506941 SOWAHBA6NEL2 793 aa21.07■□□□□ 0.96
NPHP4-210ENST00000506941 POTEB2H3BUK9 544 aa21.07■□□□□ 0.96
NPHP4-210ENST00000506941 OPLAHO14841 1288 aa21.07■□□□□ 0.96
NPHP4-210ENST00000506941 METAP2P50579 478 aaKnown RBP eCLIP21.07■□□□□ 0.96
NPHP4-210ENST00000506941 BAATQ14032 418 aaPredicted RBP21.07■□□□□ 0.96
NPHP4-210ENST00000506941 MFSD14CQ5VZR4 134 aa21.07■□□□□ 0.96
NPHP4-210ENST00000506941 TRPV1Q8NER1 839 aa21.07■□□□□ 0.96
NPHP4-210ENST00000506941 TBC1D5Q92609 795 aa21.07■□□□□ 0.96
NPHP4-210ENST00000506941 RRP36Q96EU6 259 aaKnown RBP21.07■□□□□ 0.96
NPHP4-210ENST00000506941 KIF2CQ99661 725 aa21.07■□□□□ 0.96
NPHP4-210ENST00000506941 TNRC18O15417 2968 aaPredicted RBP21.07■□□□□ 0.96
NPHP4-210ENST00000506941 hCG_1642624A0A1W2PR95 340 aa21.06■□□□□ 0.96
NPHP4-210ENST00000506941 PTPDC1A2A3K4 754 aa21.06■□□□□ 0.96
NPHP4-210ENST00000506941 PDIA3P30101 505 aaKnown RBP21.06■□□□□ 0.96
NPHP4-210ENST00000506941 CCND3P30281 292 aaPredicted RBP21.06■□□□□ 0.96
NPHP4-210ENST00000506941 ADD1P35611 737 aaKnown RBP21.06■□□□□ 0.96
NPHP4-210ENST00000506941 TINF2Q9BSI4 451 aa21.06■□□□□ 0.96
NPHP4-210ENST00000506941 C22orf23Q9BZE7 217 aa21.06■□□□□ 0.96
NPHP4-210ENST00000506941 RNF208Q9H0X6 261 aa21.06■□□□□ 0.96
NPHP4-210ENST00000506941 ALDH8A1Q9H2A2 487 aaPredicted RBP21.06■□□□□ 0.96
NPHP4-210ENST00000506941 PAK6Q9NQU5 681 aaPredicted RBP21.06■□□□□ 0.96
NPHP4-210ENST00000506941 MRPL11Q9Y3B7 192 aaKnown RBP21.06■□□□□ 0.96
NPHP4-210ENST00000506941 PCDHA1Q9Y5I3 950 aa21.06■□□□□ 0.96
NPHP4-210ENST00000506941 RPTORQ8N122 1335 aa21.05■□□□□ 0.96
NPHP4-210ENST00000506941 CYBAP13498 195 aa21.05■□□□□ 0.96
NPHP4-210ENST00000506941 RPS6P62753 249 aaKnown RBP21.05■□□□□ 0.96
NPHP4-210ENST00000506941 MAMDC4Q6UXC1 1216 aa21.05■□□□□ 0.96
NPHP4-210ENST00000506941 RNF207Q6ZRF8 634 aa21.05■□□□□ 0.96
NPHP4-210ENST00000506941 ZNF467Q7Z7K2 595 aaPredicted RBP21.05■□□□□ 0.96
NPHP4-210ENST00000506941 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.05■□□□□ 0.96
NPHP4-210ENST00000506941 DDX49Q9Y6V7 483 aaKnown RBP21.05■□□□□ 0.96
NPHP4-210ENST00000506941 CALML3P27482 149 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms