RNA–Protein interactions for RNA: ENST00000505526.1

PDCD6-203, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-203ENST00000505526 DDX11Q96FC9 970 aa18.41■□□□□ 0.54
PDCD6-203ENST00000505526 KIF2CQ99661 725 aa18.41■□□□□ 0.54
PDCD6-203ENST00000505526 CNNM2Q9H8M5 875 aa18.41■□□□□ 0.54
PDCD6-203ENST00000505526 ZNF287Q9HBT7 754 aa18.41■□□□□ 0.54
PDCD6-203ENST00000505526 ZHX1Q9UKY1 873 aaPredicted RBP18.41■□□□□ 0.54
PDCD6-203ENST00000505526 MYADML2A6NDP7 307 aa18.4■□□□□ 0.54
PDCD6-203ENST00000505526 PPIGQ13427 754 aaKnown RBP eCLIP18.4■□□□□ 0.54
PDCD6-203ENST00000505526 SNRNP48Q6IEG0 339 aaKnown RBP18.4■□□□□ 0.54
PDCD6-203ENST00000505526 MAMDC4Q6UXC1 1216 aa18.4■□□□□ 0.54
PDCD6-203ENST00000505526 C16orf59Q7L2K0 433 aa18.4■□□□□ 0.54
PDCD6-203ENST00000505526 RALYLQ86SE5 291 aaKnown RBP18.4■□□□□ 0.54
PDCD6-203ENST00000505526 NCOA7Q8NI08 942 aa18.4■□□□□ 0.54
PDCD6-203ENST00000505526 GLT1D1Q96MS3 346 aa18.4■□□□□ 0.54
PDCD6-203ENST00000505526 NEK1Q96PY6 1258 aa18.4■□□□□ 0.54
PDCD6-203ENST00000505526 TEX13BQ9BXU2 312 aa18.4■□□□□ 0.54
PDCD6-203ENST00000505526 ELP1O95163 1332 aa18.4■□□□□ 0.54
PDCD6-203ENST00000505526 MROH7Q68CQ1 1323 aa18.4■□□□□ 0.54
PDCD6-203ENST00000505526 B4E1Z4 1266 aa18.39■□□□□ 0.54
PDCD6-203ENST00000505526 ORC4O43929 436 aa18.39■□□□□ 0.54
PDCD6-203ENST00000505526 DUSP11O75319 330 aaKnown RBP18.39■□□□□ 0.54
PDCD6-203ENST00000505526 CASTP20810 708 aaKnown RBP18.39■□□□□ 0.54
PDCD6-203ENST00000505526 PSMA5P28066 241 aa18.39■□□□□ 0.54
PDCD6-203ENST00000505526 COL9A3Q14050 684 aaPredicted RBP18.39■□□□□ 0.54
PDCD6-203ENST00000505526 TMEM240Q5SV17 173 aa18.39■□□□□ 0.54
PDCD6-203ENST00000505526 CCDC174Q6PII3 467 aa18.39■□□□□ 0.54
PDCD6-203ENST00000505526 PPM1EQ8WY54 764 aa18.39■□□□□ 0.54
PDCD6-203ENST00000505526 GAS2L1Q99501 681 aaPredicted RBP18.39■□□□□ 0.54
PDCD6-203ENST00000505526 NUP88Q99567 741 aaPredicted RBP18.39■□□□□ 0.54
PDCD6-203ENST00000505526 SLF1Q9BQI6 1058 aa18.39■□□□□ 0.54
PDCD6-203ENST00000505526 PBX4Q9BYU1 374 aa18.39■□□□□ 0.54
PDCD6-203ENST00000505526 KRT23Q9C075 422 aa18.39■□□□□ 0.54
PDCD6-203ENST00000505526 RIPK3Q9Y572 518 aa18.39■□□□□ 0.54
PDCD6-203ENST00000505526 DNAJC25-GNG10A0A024R161 153 aa18.39■□□□□ 0.53
PDCD6-203ENST00000505526 GRXCR1A8MXD5 290 aa18.39■□□□□ 0.53
PDCD6-203ENST00000505526 RANBP6O60518 1105 aaKnown RBP18.39■□□□□ 0.53
PDCD6-203ENST00000505526 C6orf222P0C671 652 aaPredicted RBP18.39■□□□□ 0.53
PDCD6-203ENST00000505526 RASA1P20936 1047 aa18.39■□□□□ 0.53
PDCD6-203ENST00000505526 CST5P28325 142 aaPredicted RBP18.39■□□□□ 0.53
PDCD6-203ENST00000505526 PBX2P40425 430 aa18.39■□□□□ 0.53
PDCD6-203ENST00000505526 CDK7P50613 346 aa18.39■□□□□ 0.53
PDCD6-203ENST00000505526 IRX5P78411 483 aaPredicted RBP18.39■□□□□ 0.53
PDCD6-203ENST00000505526 PCSK9Q8NBP7 692 aaKnown RBP18.39■□□□□ 0.53
PDCD6-203ENST00000505526 VTI1AQ96AJ9 217 aa18.39■□□□□ 0.53
PDCD6-203ENST00000505526 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.39■□□□□ 0.53
PDCD6-203ENST00000505526 UPF3BQ9BZI7 483 aaKnown RBP18.39■□□□□ 0.53
PDCD6-203ENST00000505526 TM6SF1Q9BZW5 370 aa18.39■□□□□ 0.53
PDCD6-203ENST00000505526 KDM4AO75164 1064 aa18.38■□□□□ 0.53
PDCD6-203ENST00000505526 ASGR1P07306 291 aa18.38■□□□□ 0.53
PDCD6-203ENST00000505526 CPA1P15085 419 aa18.38■□□□□ 0.53
PDCD6-203ENST00000505526 CSF2RAP15509 400 aa18.38■□□□□ 0.53
PDCD6-203ENST00000505526 COL9A1P20849 921 aa18.38■□□□□ 0.53
PDCD6-203ENST00000505526 SLC4A3P48751 1232 aa18.38■□□□□ 0.53
PDCD6-203ENST00000505526 ACVR2BQ13705 512 aa18.38■□□□□ 0.53
PDCD6-203ENST00000505526 RASIP1Q5U651 963 aa18.38■□□□□ 0.53
PDCD6-203ENST00000505526 BLOC1S2Q6QNY1 142 aa18.38■□□□□ 0.53
PDCD6-203ENST00000505526 ZNF467Q7Z7K2 595 aaPredicted RBP18.38■□□□□ 0.53
PDCD6-203ENST00000505526 ZNF444Q8N0Y2 327 aaPredicted RBP18.38■□□□□ 0.53
PDCD6-203ENST00000505526 TMEM199Q8N511 208 aa18.38■□□□□ 0.53
PDCD6-203ENST00000505526 ESR2Q92731 530 aa18.38■□□□□ 0.53
PDCD6-203ENST00000505526 PRDM12Q9H4Q4 367 aa18.38■□□□□ 0.53
PDCD6-203ENST00000505526 ZSWIM6Q9HCJ5 1215 aa18.38■□□□□ 0.53
PDCD6-203ENST00000505526 HMGB1P09429 215 aaKnown RBP18.37■□□□□ 0.53
PDCD6-203ENST00000505526 MB21D2Q8IYB1 491 aaPredicted RBP18.37■□□□□ 0.53
PDCD6-203ENST00000505526 PRPF38AQ8NAV1 312 aaKnown RBP18.37■□□□□ 0.53
PDCD6-203ENST00000505526 SPC25Q9HBM1 224 aa18.37■□□□□ 0.53
PDCD6-203ENST00000505526 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.37■□□□□ 0.53
PDCD6-203ENST00000505526 A0A0U1RQG5 324 aaPredicted RBP18.36■□□□□ 0.53
PDCD6-203ENST00000505526 ARVCFO00192 962 aa18.36■□□□□ 0.53
PDCD6-203ENST00000505526 ADCY6O43306 1168 aa18.36■□□□□ 0.53
PDCD6-203ENST00000505526 ACRP10323 421 aa18.36■□□□□ 0.53
PDCD6-203ENST00000505526 TFAP4Q01664 338 aa18.36■□□□□ 0.53
PDCD6-203ENST00000505526 CCDC144BQ3MJ40 725 aa18.36■□□□□ 0.53
PDCD6-203ENST00000505526 ZNF365Q70YC5 407 aa18.36■□□□□ 0.53
PDCD6-203ENST00000505526 RUFY3Q7L099 469 aa18.36■□□□□ 0.53
PDCD6-203ENST00000505526 CYB5R4Q7L1T6 521 aa18.36■□□□□ 0.53
PDCD6-203ENST00000505526 CHST3Q7LGC8 479 aa18.36■□□□□ 0.53
PDCD6-203ENST00000505526 CPXCR1Q8N123 301 aa18.36■□□□□ 0.53
PDCD6-203ENST00000505526 ATXN2LQ8WWM7 1075 aaKnown RBP18.36■□□□□ 0.53
PDCD6-203ENST00000505526 UPF3AQ9H1J1 476 aaKnown RBP18.36■□□□□ 0.53
PDCD6-203ENST00000505526 ZSWIM5Q9P217 1185 aa18.36■□□□□ 0.53
PDCD6-203ENST00000505526 CYP46A1Q9Y6A2 500 aa18.36■□□□□ 0.53
PDCD6-203ENST00000505526 TSPY2A6NKD2 308 aa18.35■□□□□ 0.53
PDCD6-203ENST00000505526 F5H6K3 240 aa18.35■□□□□ 0.53
PDCD6-203ENST00000505526 ATP2A1O14983 1001 aa18.35■□□□□ 0.53
PDCD6-203ENST00000505526 ZBED4O75132 1171 aa18.35■□□□□ 0.53
PDCD6-203ENST00000505526 NDUFB10O96000 172 aa18.35■□□□□ 0.53
PDCD6-203ENST00000505526 TSPY3P0CV98 308 aa18.35■□□□□ 0.53
PDCD6-203ENST00000505526 TSPY8P0CW00 308 aa18.35■□□□□ 0.53
PDCD6-203ENST00000505526 RPS6KB1P23443 525 aa18.35■□□□□ 0.53
PDCD6-203ENST00000505526 MCM5P33992 734 aa18.35■□□□□ 0.53
PDCD6-203ENST00000505526 GJA9P57773 515 aa18.35■□□□□ 0.53
PDCD6-203ENST00000505526 KLRC3Q07444 240 aa18.35■□□□□ 0.53
PDCD6-203ENST00000505526 RABEP1Q15276 862 aa18.35■□□□□ 0.53
PDCD6-203ENST00000505526 GNASQ5JWF2 1037 aa18.35■□□□□ 0.53
PDCD6-203ENST00000505526 PSRC1Q6PGN9 363 aaPredicted RBP18.35■□□□□ 0.53
PDCD6-203ENST00000505526 DHX32Q7L7V1 743 aaKnown RBP18.35■□□□□ 0.53
PDCD6-203ENST00000505526 FAM126BQ8IXS8 530 aa18.35■□□□□ 0.53
PDCD6-203ENST00000505526 TCEANC2Q96MN5 208 aa18.35■□□□□ 0.53
PDCD6-203ENST00000505526 PPP1R12CQ9BZL4 782 aa18.35■□□□□ 0.53
PDCD6-203ENST00000505526 ABHD16BQ9H3Z7 469 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms