RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 KIAA1217Q5T5P2 1943 aa5.74□□□□□ -1.49
LMNB1-208ENST00000504788 MYH15Q9Y2K3 1946 aa5.74□□□□□ -1.49
LMNB1-208ENST00000504788 STK36Q9NRP7 1315 aa5.74□□□□□ -1.49
LMNB1-208ENST00000504788 PNMA6FA0A0J9YX94 578 aa5.74□□□□□ -1.49
LMNB1-208ENST00000504788 GPR25O00155 361 aa5.74□□□□□ -1.49
LMNB1-208ENST00000504788 NFIBO00712 420 aa5.74□□□□□ -1.49
LMNB1-208ENST00000504788 MEIS2O14770 477 aa5.74□□□□□ -1.49
LMNB1-208ENST00000504788 FOXN1O15353 648 aa5.74□□□□□ -1.49
LMNB1-208ENST00000504788 KIF5BP33176 963 aa5.74□□□□□ -1.49
LMNB1-208ENST00000504788 MCM2P49736 904 aa5.74□□□□□ -1.49
LMNB1-208ENST00000504788 CLK2P49760 499 aaKnown RBP5.74□□□□□ -1.49
LMNB1-208ENST00000504788 LACTBP83111 547 aaPredicted RBP5.74□□□□□ -1.49
LMNB1-208ENST00000504788 MAP2K1Q02750 393 aaPredicted RBP5.74□□□□□ -1.49
LMNB1-208ENST00000504788 PABPC4Q13310 644 aaKnown RBP eCLIP5.74□□□□□ -1.49
LMNB1-208ENST00000504788 PFKFB3Q16875 520 aaPredicted RBP5.74□□□□□ -1.49
LMNB1-208ENST00000504788 CCDC96Q2M329 555 aa5.74□□□□□ -1.49
LMNB1-208ENST00000504788 MUM1L1Q5H9M0 696 aa5.74□□□□□ -1.49
LMNB1-208ENST00000504788 WWC2Q6AWC2 1192 aa5.74□□□□□ -1.49
LMNB1-208ENST00000504788 NFXL1Q6ZNB6 911 aa5.74□□□□□ -1.49
LMNB1-208ENST00000504788 PAXIP1Q6ZW49 1069 aaPredicted RBP5.74□□□□□ -1.49
LMNB1-208ENST00000504788 NOL8Q76FK4 1167 aaKnown RBP5.74□□□□□ -1.49
LMNB1-208ENST00000504788 CCDC82Q8N4S0 544 aa5.74□□□□□ -1.49
LMNB1-208ENST00000504788 ANKRD13CQ8N6S4 541 aa5.74□□□□□ -1.49
LMNB1-208ENST00000504788 SHCBP1Q8NEM2 672 aa5.74□□□□□ -1.49
LMNB1-208ENST00000504788 CTCFLQ8NI51 663 aaPredicted RBP5.74□□□□□ -1.49
LMNB1-208ENST00000504788 CRYGNQ8WXF5 182 aa5.74□□□□□ -1.49
LMNB1-208ENST00000504788 TBC1D5Q92609 795 aa5.74□□□□□ -1.49
LMNB1-208ENST00000504788 TRIM47Q96LD4 638 aa5.74□□□□□ -1.49
LMNB1-208ENST00000504788 TEX13BQ9BXU2 312 aa5.74□□□□□ -1.49
LMNB1-208ENST00000504788 SLKQ9H2G2 1235 aaPredicted RBP5.74□□□□□ -1.49
LMNB1-208ENST00000504788 EFCC1Q9HA90 598 aa5.74□□□□□ -1.49
LMNB1-208ENST00000504788 RAVER2Q9HCJ3 691 aaKnown RBP5.74□□□□□ -1.49
LMNB1-208ENST00000504788 SH2B1Q9NRF2 756 aaPredicted RBP5.74□□□□□ -1.49
LMNB1-208ENST00000504788 COL20A1Q9P218 1284 aa5.74□□□□□ -1.49
LMNB1-208ENST00000504788 PNMA3Q9UL41 463 aa5.74□□□□□ -1.49
LMNB1-208ENST00000504788 V9GY48 417 aaPredicted RBP5.74□□□□□ -1.49
LMNB1-208ENST00000504788 FRMPD3Q5JV73 1810 aa5.73□□□□□ -1.49
LMNB1-208ENST00000504788 K7ELQ4 463 aaPredicted RBP5.73□□□□□ -1.49
LMNB1-208ENST00000504788 STXBP3O00186 592 aa5.73□□□□□ -1.49
LMNB1-208ENST00000504788 ST18O60284 1047 aa5.73□□□□□ -1.49
LMNB1-208ENST00000504788 HSPA8P11142 646 aaKnown RBP5.73□□□□□ -1.49
LMNB1-208ENST00000504788 ERCC3P19447 782 aa5.73□□□□□ -1.49
LMNB1-208ENST00000504788 OSBPP22059 807 aa5.73□□□□□ -1.49
LMNB1-208ENST00000504788 STAT3P40763 770 aa5.73□□□□□ -1.49
LMNB1-208ENST00000504788 GNAQP50148 359 aa5.73□□□□□ -1.49
LMNB1-208ENST00000504788 IRX3P78415 501 aaPredicted RBP5.73□□□□□ -1.49
LMNB1-208ENST00000504788 GRB14Q14449 540 aa5.73□□□□□ -1.49
LMNB1-208ENST00000504788 MORN1Q5T089 497 aa5.73□□□□□ -1.49
LMNB1-208ENST00000504788 CCDC83Q8IWF9 413 aa5.73□□□□□ -1.49
LMNB1-208ENST00000504788 RGS22Q8NE09 1264 aa5.73□□□□□ -1.49
LMNB1-208ENST00000504788 GTF3C2Q8WUA4 911 aaPredicted RBP5.73□□□□□ -1.49
LMNB1-208ENST00000504788 ZNF296Q8WUU4 475 aaPredicted RBP5.73□□□□□ -1.49
LMNB1-208ENST00000504788 ZSCAN31Q96LW9 406 aaPredicted RBP5.73□□□□□ -1.49
LMNB1-208ENST00000504788 LLPHQ9BRT6 129 aaKnown RBP5.73□□□□□ -1.49
LMNB1-208ENST00000504788 ZMYND12Q9H0C1 365 aa5.73□□□□□ -1.49
LMNB1-208ENST00000504788 ZFYVE28Q9HCC9 887 aa5.73□□□□□ -1.49
LMNB1-208ENST00000504788 A1CFQ9NQ94 594 aaKnown RBP5.73□□□□□ -1.49
LMNB1-208ENST00000504788 BARHL2Q9NY43 387 aa5.73□□□□□ -1.49
LMNB1-208ENST00000504788 TSKSQ9UJT2 592 aa5.73□□□□□ -1.49
LMNB1-208ENST00000504788 FRMPD4Q14CM0 1322 aa5.73□□□□□ -1.49
LMNB1-208ENST00000504788 WDR81Q562E7 1941 aa5.72□□□□□ -1.49
LMNB1-208ENST00000504788 CCDC196A0A1B0GTZ2 297 aa5.72□□□□□ -1.49
LMNB1-208ENST00000504788 ESYT2A0FGR8 921 aa5.72□□□□□ -1.49
LMNB1-208ENST00000504788 PTPDC1A2A3K4 754 aa5.72□□□□□ -1.49
LMNB1-208ENST00000504788 PIK3CDO00329 1044 aa5.72□□□□□ -1.49
LMNB1-208ENST00000504788 RAD21O60216 631 aa5.72□□□□□ -1.49
LMNB1-208ENST00000504788 COBLO75128 1261 aa5.72□□□□□ -1.49
LMNB1-208ENST00000504788 HOXC6P09630 235 aa5.72□□□□□ -1.49
LMNB1-208ENST00000504788 SCG2P13521 617 aa5.72□□□□□ -1.49
LMNB1-208ENST00000504788 TIE1P35590 1138 aa5.72□□□□□ -1.49
LMNB1-208ENST00000504788 HSD17B4P51659 736 aa5.72□□□□□ -1.49
LMNB1-208ENST00000504788 OTUD7BQ6GQQ9 843 aa5.72□□□□□ -1.49
LMNB1-208ENST00000504788 SNRNP48Q6IEG0 339 aaKnown RBP5.72□□□□□ -1.49
LMNB1-208ENST00000504788 GPR142Q7Z601 462 aa5.72□□□□□ -1.49
LMNB1-208ENST00000504788 CPXCR1Q8N123 301 aa5.72□□□□□ -1.49
LMNB1-208ENST00000504788 FAM133AQ8N9E0 248 aa5.72□□□□□ -1.49
LMNB1-208ENST00000504788 GPRC5AQ8NFJ5 357 aa5.72□□□□□ -1.49
LMNB1-208ENST00000504788 SMCR8Q8TEV9 937 aaPredicted RBP5.72□□□□□ -1.49
LMNB1-208ENST00000504788 GPKOWQ92917 476 aaPredicted RBP eCLIP5.72□□□□□ -1.498e-6■■■□□ 18.6
LMNB1-208ENST00000504788 TNFRSF25Q93038 417 aa5.72□□□□□ -1.49
LMNB1-208ENST00000504788 COA7Q96BR5 231 aa5.72□□□□□ -1.49
LMNB1-208ENST00000504788 INTS4Q96HW7 963 aaKnown RBP5.72□□□□□ -1.49
LMNB1-208ENST00000504788 PURBQ96QR8 312 aaKnown RBP5.72□□□□□ -1.49
LMNB1-208ENST00000504788 AMNQ9BXJ7 453 aa5.72□□□□□ -1.49
LMNB1-208ENST00000504788 KATNBL1Q9H079 304 aa5.72□□□□□ -1.49
LMNB1-208ENST00000504788 VAT1LQ9HCJ6 419 aa5.72□□□□□ -1.49
LMNB1-208ENST00000504788 DOCK5Q9H7D0 1870 aa5.72□□□□□ -1.49
LMNB1-208ENST00000504788 DEXIO95424 95 aa5.71□□□□□ -1.49
LMNB1-208ENST00000504788 HSPA1AP0DMV8 641 aaKnown RBP5.71□□□□□ -1.49
LMNB1-208ENST00000504788 HSPA1BP0DMV9 641 aaKnown RBP5.71□□□□□ -1.49
LMNB1-208ENST00000504788 PTPREP23469 700 aa5.71□□□□□ -1.49
LMNB1-208ENST00000504788 FGD1P98174 961 aa5.71□□□□□ -1.49
LMNB1-208ENST00000504788 SP3Q02447 781 aa5.71□□□□□ -1.49
LMNB1-208ENST00000504788 CCDC174Q6PII3 467 aa5.71□□□□□ -1.49
LMNB1-208ENST00000504788 SYNE3Q6ZMZ3 975 aa5.71□□□□□ -1.49
LMNB1-208ENST00000504788 FBXO11Q86XK2 927 aa5.71□□□□□ -1.49
LMNB1-208ENST00000504788 HOMER1Q86YM7 354 aa5.71□□□□□ -1.49
LMNB1-208ENST00000504788 ABRAQ8N0Z2 381 aa5.71□□□□□ -1.49
LMNB1-208ENST00000504788 MORC4Q8TE76 937 aa5.71□□□□□ -1.49
LMNB1-208ENST00000504788 PAGR1Q9BTK6 254 aa5.71□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms