RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 PRAMEF1O95521 474 aa4.06□□□□□ -1.76
HMGB3P17-201ENST00000504195 DBHP09172 617 aa4.06□□□□□ -1.76
HMGB3P17-201ENST00000504195 DPTQ07507 201 aa4.06□□□□□ -1.76
HMGB3P17-201ENST00000504195 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P17-201ENST00000504195 TMC3Q7Z5M5 1100 aa4.06□□□□□ -1.76
HMGB3P17-201ENST00000504195 PLEKHH3Q7Z736 793 aa4.06□□□□□ -1.76
HMGB3P17-201ENST00000504195 CIR1Q86X95 450 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P17-201ENST00000504195 VOPP1Q96AW1 172 aa4.06□□□□□ -1.76
HMGB3P17-201ENST00000504195 ZBTB8AQ96BR9 441 aa4.06□□□□□ -1.76
HMGB3P17-201ENST00000504195 CDADC1Q9BWV3 514 aa4.06□□□□□ -1.76
HMGB3P17-201ENST00000504195 DLL4Q9NR61 685 aa4.06□□□□□ -1.76
HMGB3P17-201ENST00000504195 HCFC2Q9Y5Z7 792 aa4.06□□□□□ -1.76
HMGB3P17-201ENST00000504195 ZNF202O95125 648 aa4.05□□□□□ -1.76
HMGB3P17-201ENST00000504195 ZNF205O95201 554 aa4.05□□□□□ -1.76
HMGB3P17-201ENST00000504195 HTR3BO95264 441 aa4.05□□□□□ -1.76
HMGB3P17-201ENST00000504195 ASGR2P07307 311 aa4.05□□□□□ -1.76
HMGB3P17-201ENST00000504195 GNA15P30679 374 aa4.05□□□□□ -1.76
HMGB3P17-201ENST00000504195 CORO7P57737 925 aa4.05□□□□□ -1.76
HMGB3P17-201ENST00000504195 MAP3K11Q16584 847 aa4.05□□□□□ -1.76
HMGB3P17-201ENST00000504195 NBPF12Q5TAG4 269 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P17-201ENST00000504195 BICRALQ6AI39 1079 aa4.05□□□□□ -1.76
HMGB3P17-201ENST00000504195 SCUBE1Q8IWY4 988 aa4.05□□□□□ -1.76
HMGB3P17-201ENST00000504195 GATAD2BQ8WXI9 593 aa4.05□□□□□ -1.76
HMGB3P17-201ENST00000504195 NOC4LQ9BVI4 516 aaKnown RBP4.05□□□□□ -1.76
HMGB3P17-201ENST00000504195 ANTXR1Q9H6X2 564 aa4.05□□□□□ -1.76
HMGB3P17-201ENST00000504195 CD248Q9HCU0 757 aa4.05□□□□□ -1.76
HMGB3P17-201ENST00000504195 CHST7Q9NS84 486 aa4.05□□□□□ -1.76
HMGB3P17-201ENST00000504195 PRR13Q9NZ81 148 aa4.05□□□□□ -1.76
HMGB3P17-201ENST00000504195 WWC3Q9ULE0 1092 aa4.05□□□□□ -1.76
HMGB3P17-201ENST00000504195 PLA2G2DQ9UNK4 145 aa4.05□□□□□ -1.76
HMGB3P17-201ENST00000504195 A0A087X1B8 175 aa4.04□□□□□ -1.76
HMGB3P17-201ENST00000504195 F8W031 263 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P17-201ENST00000504195 MCM7P33993 719 aa4.04□□□□□ -1.76
HMGB3P17-201ENST00000504195 CCNFP41002 786 aa4.04□□□□□ -1.76
HMGB3P17-201ENST00000504195 KRTAP10-9P60411 292 aa4.04□□□□□ -1.76
HMGB3P17-201ENST00000504195 PRR5P85299 388 aa4.04□□□□□ -1.76
HMGB3P17-201ENST00000504195 FAM26FQ5R3K3 315 aa4.04□□□□□ -1.76
HMGB3P17-201ENST00000504195 JAMLQ86YT9 394 aa4.04□□□□□ -1.76
HMGB3P17-201ENST00000504195 SMARCC2Q8TAQ2 1214 aa4.04□□□□□ -1.76
HMGB3P17-201ENST00000504195 JMJD8Q96S16 334 aa4.04□□□□□ -1.76
HMGB3P17-201ENST00000504195 SETDB2Q96T68 719 aa4.04□□□□□ -1.76
HMGB3P17-201ENST00000504195 ARID3AQ99856 593 aa4.04□□□□□ -1.76
HMGB3P17-201ENST00000504195 TRIM8Q9BZR9 551 aa4.04□□□□□ -1.76
HMGB3P17-201ENST00000504195 PCDH18Q9HCL0 1135 aa4.04□□□□□ -1.76
HMGB3P17-201ENST00000504195 PDLIM7Q9NR12 457 aa4.04□□□□□ -1.76
HMGB3P17-201ENST00000504195 SPATA6Q9NWH7 488 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P17-201ENST00000504195 AK5Q9Y6K8 562 aa4.04□□□□□ -1.76
HMGB3P17-201ENST00000504195 FAM221AA4D161 298 aa4.03□□□□□ -1.76
HMGB3P17-201ENST00000504195 VAV1P15498 845 aa4.03□□□□□ -1.76
HMGB3P17-201ENST00000504195 RAG1P15918 1043 aa4.03□□□□□ -1.76
HMGB3P17-201ENST00000504195 INHBCP55103 352 aa4.03□□□□□ -1.76
HMGB3P17-201ENST00000504195 RBM10P98175 930 aaKnown RBP4.03□□□□□ -1.76
HMGB3P17-201ENST00000504195 LMNB2Q03252 620 aa4.03□□□□□ -1.76
HMGB3P17-201ENST00000504195 SMAD4Q13485 552 aaKnown RBP4.03□□□□□ -1.76
HMGB3P17-201ENST00000504195 CYP2R1Q6VVX0 501 aa4.03□□□□□ -1.76
HMGB3P17-201ENST00000504195 AMER2Q8N7J2 671 aa4.03□□□□□ -1.76
HMGB3P17-201ENST00000504195 PHC3Q8NDX5 983 aa4.03□□□□□ -1.76
HMGB3P17-201ENST00000504195 ASB16Q96NS5 453 aa4.03□□□□□ -1.76
HMGB3P17-201ENST00000504195 PPP4R1LQ9P1A2 415 aa4.03□□□□□ -1.76
HMGB3P17-201ENST00000504195 ZFR2Q9UPR6 939 aaKnown RBP4.03□□□□□ -1.76
HMGB3P17-201ENST00000504195 KRTAP29-1A8MX34 341 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P17-201ENST00000504195 UBOX5O94941 541 aa4.02□□□□□ -1.77
HMGB3P17-201ENST00000504195 CEBPAP49715 358 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P17-201ENST00000504195 BHLHA9Q7RTU4 235 aa4.02□□□□□ -1.77
HMGB3P17-201ENST00000504195 NAT16Q8N8M0 369 aa4.02□□□□□ -1.77
HMGB3P17-201ENST00000504195 NLGN2Q8NFZ4 835 aa4.02□□□□□ -1.77
HMGB3P17-201ENST00000504195 CPA5Q8WXQ8 436 aa4.02□□□□□ -1.77
HMGB3P17-201ENST00000504195 NOX5Q96PH1 765 aa4.02□□□□□ -1.77
HMGB3P17-201ENST00000504195 CSRNP2Q9H175 543 aa4.02□□□□□ -1.77
HMGB3P17-201ENST00000504195 JADE2Q9NQC1 790 aa4.02□□□□□ -1.77
HMGB3P17-201ENST00000504195 AP5S1Q9NUS5 200 aa4.02□□□□□ -1.77
HMGB3P17-201ENST00000504195 GNEQ9Y223 722 aaKnown RBP4.02□□□□□ -1.77
HMGB3P17-201ENST00000504195 TLR6Q9Y2C9 796 aa4.02□□□□□ -1.77
HMGB3P17-201ENST00000504195 TESMINQ9Y4I5 508 aa4.02□□□□□ -1.77
HMGB3P17-201ENST00000504195 CLEC3AO75596 197 aa4.01□□□□□ -1.77
HMGB3P17-201ENST00000504195 GSNP06396 782 aa4.01□□□□□ -1.77
HMGB3P17-201ENST00000504195 LDHBP07195 334 aaKnown RBP4.01□□□□□ -1.77
HMGB3P17-201ENST00000504195 PMLP29590 882 aa4.01□□□□□ -1.77
HMGB3P17-201ENST00000504195 ST13P50502 369 aaKnown RBP4.01□□□□□ -1.77
HMGB3P17-201ENST00000504195 TRIM26Q12899 539 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P17-201ENST00000504195 FOXE3Q13461 319 aa4.01□□□□□ -1.77
HMGB3P17-201ENST00000504195 CAMK2GQ13555 558 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P17-201ENST00000504195 SNW1Q13573 536 aaKnown RBP4.01□□□□□ -1.77
HMGB3P17-201ENST00000504195 MPP2Q14168 576 aa4.01□□□□□ -1.77
HMGB3P17-201ENST00000504195 SLC9A5Q14940 896 aa4.01□□□□□ -1.77
HMGB3P17-201ENST00000504195 R3HDM1Q15032 1099 aaKnown RBP4.01□□□□□ -1.77
HMGB3P17-201ENST00000504195 BNC2Q6ZN30 1099 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P17-201ENST00000504195 TMEM52Q8NDY8 209 aa4.01□□□□□ -1.77
HMGB3P17-201ENST00000504195 RGS22Q8NE09 1264 aa4.01□□□□□ -1.77
HMGB3P17-201ENST00000504195 IGDCC4Q8TDY8 1250 aa4.01□□□□□ -1.77
HMGB3P17-201ENST00000504195 TSPAN17Q96FV3 270 aa4.01□□□□□ -1.77
HMGB3P17-201ENST00000504195 PCDHB12Q9Y5F1 795 aa4.01□□□□□ -1.77
HMGB3P17-201ENST00000504195 GPR42O15529 346 aa4□□□□□ -1.77
HMGB3P17-201ENST00000504195 BRD1O95696 1058 aa4□□□□□ -1.77
HMGB3P17-201ENST00000504195 ARSHQ5FYA8 562 aa4□□□□□ -1.77
HMGB3P17-201ENST00000504195 MCTP2Q6DN12 878 aa4□□□□□ -1.77
HMGB3P17-201ENST00000504195 CABP7Q86V35 215 aa4□□□□□ -1.77
HMGB3P17-201ENST00000504195 DNERQ8NFT8 737 aa4□□□□□ -1.77
HMGB3P17-201ENST00000504195 USP33Q8TEY7 942 aa4□□□□□ -1.77
HMGB3P17-201ENST00000504195 LCORQ96JN0 433 aaPredicted RBP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms