RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 EVI5O60447 810 aa6.59□□□□□ -1.35
LINC01340-201ENST00000504012 USO1O60763 962 aaKnown RBP6.59□□□□□ -1.35
LINC01340-201ENST00000504012 SSBP05455 408 aaKnown RBP eCLIP6.59□□□□□ -1.35
LINC01340-201ENST00000504012 CPA1P15085 419 aa6.59□□□□□ -1.35
LINC01340-201ENST00000504012 CPA3P15088 417 aa6.59□□□□□ -1.35
LINC01340-201ENST00000504012 GNAZP19086 355 aa6.59□□□□□ -1.35
LINC01340-201ENST00000504012 HSPA9P38646 679 aaKnown RBP6.59□□□□□ -1.35
LINC01340-201ENST00000504012 SEC24CP53992 1094 aa6.59□□□□□ -1.35
LINC01340-201ENST00000504012 ATP11AP98196 1134 aa6.59□□□□□ -1.35
LINC01340-201ENST00000504012 GUCY1A3Q02108 690 aa6.59□□□□□ -1.35
LINC01340-201ENST00000504012 ADAM9Q13443 819 aa6.59□□□□□ -1.35
LINC01340-201ENST00000504012 MTF1Q14872 753 aa6.59□□□□□ -1.35
LINC01340-201ENST00000504012 SLC39A14Q15043 492 aa6.59□□□□□ -1.35
LINC01340-201ENST00000504012 STK38Q15208 465 aa6.59□□□□□ -1.35
LINC01340-201ENST00000504012 GALNTL6Q49A17 601 aa6.59□□□□□ -1.35
LINC01340-201ENST00000504012 C4orf46Q504U0 113 aa6.59□□□□□ -1.35
LINC01340-201ENST00000504012 SPDYCQ5MJ68 293 aa6.59□□□□□ -1.35
LINC01340-201ENST00000504012 ARMC3Q5W041 872 aa6.59□□□□□ -1.35
LINC01340-201ENST00000504012 NCAPH2Q6IBW4 605 aa6.59□□□□□ -1.35
LINC01340-201ENST00000504012 ZNF280DQ6N043 979 aa6.59□□□□□ -1.35
LINC01340-201ENST00000504012 KANK3Q6NY19 840 aa6.59□□□□□ -1.35
LINC01340-201ENST00000504012 CCDC129Q6ZRS4 1044 aa6.59□□□□□ -1.35
LINC01340-201ENST00000504012 SEPT14Q6ZU15 432 aa6.59□□□□□ -1.35
LINC01340-201ENST00000504012 WDR66Q8TBY9 1149 aa6.59□□□□□ -1.35
LINC01340-201ENST00000504012 RHPN1Q8TCX5 695 aa6.59□□□□□ -1.35
LINC01340-201ENST00000504012 ATP8B4Q8TF62 1192 aa6.59□□□□□ -1.35
LINC01340-201ENST00000504012 BHMTQ93088 406 aa6.59□□□□□ -1.35
LINC01340-201ENST00000504012 ZNF653Q96CK0 615 aa6.59□□□□□ -1.35
LINC01340-201ENST00000504012 ZNF274Q96GC6 653 aaPredicted RBP6.59□□□□□ -1.35
LINC01340-201ENST00000504012 GPATCH3Q96I76 525 aa6.59□□□□□ -1.35
LINC01340-201ENST00000504012 FGD4Q96M96 766 aa6.59□□□□□ -1.35
LINC01340-201ENST00000504012 PURBQ96QR8 312 aaKnown RBP6.59□□□□□ -1.35
LINC01340-201ENST00000504012 NDNQ99608 321 aa6.59□□□□□ -1.35
LINC01340-201ENST00000504012 ARPC5LQ9BPX5 153 aa6.59□□□□□ -1.35
LINC01340-201ENST00000504012 TIPINQ9BVW5 301 aa6.59□□□□□ -1.35
LINC01340-201ENST00000504012 AGXT2Q9BYV1 514 aa6.59□□□□□ -1.35
LINC01340-201ENST00000504012 FAM117AQ9C073 453 aa6.59□□□□□ -1.35
LINC01340-201ENST00000504012 CCDC134Q9H6E4 229 aa6.59□□□□□ -1.35
LINC01340-201ENST00000504012 NRDE2Q9H7Z3 1164 aa6.59□□□□□ -1.35
LINC01340-201ENST00000504012 C14orf93Q9H972 538 aaKnown RBP6.59□□□□□ -1.35
LINC01340-201ENST00000504012 GDF3Q9NR23 364 aa6.59□□□□□ -1.35
LINC01340-201ENST00000504012 ATP8A2Q9NTI2 1148 aa6.59□□□□□ -1.35
LINC01340-201ENST00000504012 PANK4Q9NVE7 773 aa6.59□□□□□ -1.35
LINC01340-201ENST00000504012 GALNT8Q9NY28 637 aa6.59□□□□□ -1.35
LINC01340-201ENST00000504012 STIM2Q9P246 746 aa6.59□□□□□ -1.35
LINC01340-201ENST00000504012 PDP2Q9P2J9 529 aa6.59□□□□□ -1.35
LINC01340-201ENST00000504012 TUBGCP4Q9UGJ1 667 aa6.59□□□□□ -1.35
LINC01340-201ENST00000504012 L3MBTL1Q9Y468 752 aa6.59□□□□□ -1.35
LINC01340-201ENST00000504012 EPN1Q9Y6I3 576 aaPredicted RBP6.59□□□□□ -1.35
LINC01340-201ENST00000504012 IVNS1ABPQ9Y6Y0 642 aa6.59□□□□□ -1.35
LINC01340-201ENST00000504012 BCL9O00512 1426 aa6.59□□□□□ -1.36
LINC01340-201ENST00000504012 SALL1Q9NSC2 1324 aa6.58□□□□□ -1.36
LINC01340-201ENST00000504012 CCDC162PA2VCL2 907 aa6.58□□□□□ -1.36
LINC01340-201ENST00000504012 ZNF233A6NK53 670 aa6.58□□□□□ -1.36
LINC01340-201ENST00000504012 KRT86O43790 486 aa6.58□□□□□ -1.36
LINC01340-201ENST00000504012 STRNO43815 780 aa6.58□□□□□ -1.36
LINC01340-201ENST00000504012 HIP1RO75146 1068 aa6.58□□□□□ -1.36
LINC01340-201ENST00000504012 KIF4AO95239 1232 aa6.58□□□□□ -1.36
LINC01340-201ENST00000504012 LMNAP02545 664 aaKnown RBP6.58□□□□□ -1.36
LINC01340-201ENST00000504012 FAM200BP0CF97 657 aa6.58□□□□□ -1.36
LINC01340-201ENST00000504012 TROVE2P10155 538 aaKnown RBP eCLIP6.58□□□□□ -1.36
LINC01340-201ENST00000504012 VDRP11473 427 aa6.58□□□□□ -1.36
LINC01340-201ENST00000504012 PFKFB1P16118 471 aa6.58□□□□□ -1.36
LINC01340-201ENST00000504012 TCP1P17987 556 aaKnown RBP6.58□□□□□ -1.36
LINC01340-201ENST00000504012 SP100P23497 879 aaPredicted RBP6.58□□□□□ -1.36
LINC01340-201ENST00000504012 EIF4BP23588 611 aaKnown RBP6.58□□□□□ -1.36
LINC01340-201ENST00000504012 PAX3P23760 479 aa6.58□□□□□ -1.36
LINC01340-201ENST00000504012 SMARCA1P28370 1054 aa6.58□□□□□ -1.36
LINC01340-201ENST00000504012 CCT6AP40227 531 aaKnown RBP6.58□□□□□ -1.36
LINC01340-201ENST00000504012 SYKP43405 635 aa6.58□□□□□ -1.36
LINC01340-201ENST00000504012 PIP4K2AP48426 406 aaPredicted RBP6.58□□□□□ -1.36
LINC01340-201ENST00000504012 SARSP49591 514 aaKnown RBP6.58□□□□□ -1.36
LINC01340-201ENST00000504012 RAB15P59190 212 aa6.58□□□□□ -1.36
LINC01340-201ENST00000504012 LACTBP83111 547 aaPredicted RBP6.58□□□□□ -1.36
LINC01340-201ENST00000504012 MDM2Q00987 491 aaPredicted RBP6.58□□□□□ -1.36
LINC01340-201ENST00000504012 RBL2Q08999 1139 aa6.58□□□□□ -1.36
LINC01340-201ENST00000504012 LSAMPQ13449 338 aa6.58□□□□□ -1.36
LINC01340-201ENST00000504012 KRT24Q2M2I5 525 aa6.58□□□□□ -1.36
LINC01340-201ENST00000504012 PARP6Q2NL67 630 aa6.58□□□□□ -1.36
LINC01340-201ENST00000504012 RC3H1Q5TC82 1133 aaKnown RBP6.58□□□□□ -1.36
LINC01340-201ENST00000504012 SPATA1Q5VX52 437 aa6.58□□□□□ -1.36
LINC01340-201ENST00000504012 CCDC102BQ68D86 513 aa6.58□□□□□ -1.36
LINC01340-201ENST00000504012 OR52E8Q6IFG1 317 aa6.58□□□□□ -1.36
LINC01340-201ENST00000504012 BICDL1Q6ZP65 573 aa6.58□□□□□ -1.36
LINC01340-201ENST00000504012 OGFOD1Q8N543 542 aa6.58□□□□□ -1.36
LINC01340-201ENST00000504012 CNBD1Q8NA66 436 aa6.58□□□□□ -1.36
LINC01340-201ENST00000504012 TSEN2Q8NCE0 465 aaKnown RBP6.58□□□□□ -1.36
LINC01340-201ENST00000504012 RBM46Q8TBY0 533 aaKnown RBP6.58□□□□□ -1.36
LINC01340-201ENST00000504012 PTPRN2Q92932 1015 aa6.58□□□□□ -1.36
LINC01340-201ENST00000504012 GFM2Q969S9 779 aaKnown RBP6.58□□□□□ -1.36
LINC01340-201ENST00000504012 HAPLN3Q96S86 360 aa6.58□□□□□ -1.36
LINC01340-201ENST00000504012 UBE2OQ9C0C9 1292 aaKnown RBP6.58□□□□□ -1.36
LINC01340-201ENST00000504012 PHACTR1Q9C0D0 580 aa6.58□□□□□ -1.36
LINC01340-201ENST00000504012 RAB17Q9H0T7 212 aa6.58□□□□□ -1.36
LINC01340-201ENST00000504012 ARHGEF3Q9NR81 526 aa6.58□□□□□ -1.36
LINC01340-201ENST00000504012 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.58□□□□□ -1.36
LINC01340-201ENST00000504012 TBCCD1Q9NVR7 557 aa6.58□□□□□ -1.36
LINC01340-201ENST00000504012 AATFQ9NY61 560 aaKnown RBP eCLIP6.58□□□□□ -1.36
LINC01340-201ENST00000504012 IL1RAPL1Q9NZN1 696 aa6.58□□□□□ -1.36
LINC01340-201ENST00000504012 NDUFA13Q9P0J0 144 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms