RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 CCDC183Q5T5S1 534 aa9.27□□□□□ -0.93
TOPBP1-202ENST00000503338 NEK8Q86SG6 692 aa9.27□□□□□ -0.93
TOPBP1-202ENST00000503338 MCF2L2Q86YR7 1114 aa9.27□□□□□ -0.93
TOPBP1-202ENST00000503338 PROCA1Q8NCQ7 364 aaPredicted RBP9.27□□□□□ -0.93
TOPBP1-202ENST00000503338 MRPS27Q92552 414 aaKnown RBP9.27□□□□□ -0.93
TOPBP1-202ENST00000503338 PYM1Q9BRP8 204 aaKnown RBP9.27□□□□□ -0.93
TOPBP1-202ENST00000503338 TANGO6Q9C0B7 1094 aa9.27□□□□□ -0.93
TOPBP1-202ENST00000503338 RPAP3Q9H6T3 665 aaPredicted RBP9.27□□□□□ -0.93
TOPBP1-202ENST00000503338 RRAGCQ9HB90 399 aa9.27□□□□□ -0.93
TOPBP1-202ENST00000503338 HOXC10Q9NYD6 342 aa9.27□□□□□ -0.93
TOPBP1-202ENST00000503338 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.27□□□□□ -0.93
TOPBP1-202ENST00000503338 PCDHA7Q9UN72 937 aa9.27□□□□□ -0.93
TOPBP1-202ENST00000503338 RABGAP1Q9Y3P9 1069 aa9.27□□□□□ -0.93
TOPBP1-202ENST00000503338 SRPRBQ9Y5M8 271 aaKnown RBP9.27□□□□□ -0.93
TOPBP1-202ENST00000503338 CTAGE5O15320 804 aa9.26□□□□□ -0.93
TOPBP1-202ENST00000503338 GADD45BO75293 160 aaPredicted RBP9.26□□□□□ -0.93
TOPBP1-202ENST00000503338 PTPREP23469 700 aa9.26□□□□□ -0.93
TOPBP1-202ENST00000503338 PRPHP41219 470 aa9.26□□□□□ -0.93
TOPBP1-202ENST00000503338 USP11P51784 963 aa9.26□□□□□ -0.93
TOPBP1-202ENST00000503338 HMGCS2P54868 508 aa9.26□□□□□ -0.93
TOPBP1-202ENST00000503338 ATP2C1P98194 919 aaPredicted RBP9.26□□□□□ -0.93
TOPBP1-202ENST00000503338 COG2Q14746 738 aa9.26□□□□□ -0.93
TOPBP1-202ENST00000503338 TKFCQ3LXA3 575 aa9.26□□□□□ -0.93
TOPBP1-202ENST00000503338 LDLRAD1Q5T700 205 aa9.26□□□□□ -0.93
TOPBP1-202ENST00000503338 CAVIN1Q6NZI2 390 aaKnown RBP9.26□□□□□ -0.93
TOPBP1-202ENST00000503338 MOXD1Q6UVY6 613 aa9.26□□□□□ -0.93
TOPBP1-202ENST00000503338 CATSPERGQ6ZRH7 1159 aa9.26□□□□□ -0.93
TOPBP1-202ENST00000503338 FASTKD5Q7L8L6 764 aaKnown RBP9.26□□□□□ -0.93
TOPBP1-202ENST00000503338 CCDC84Q86UT8 332 aaPredicted RBP9.26□□□□□ -0.93
TOPBP1-202ENST00000503338 CCAR1Q8IX12 1150 aaKnown RBP9.26□□□□□ -0.93
TOPBP1-202ENST00000503338 MB21D1Q8N884 522 aa9.26□□□□□ -0.93
TOPBP1-202ENST00000503338 CCDC34Q96HJ3 373 aa9.26□□□□□ -0.93
TOPBP1-202ENST00000503338 PGBD1Q96JS3 809 aa9.26□□□□□ -0.93
TOPBP1-202ENST00000503338 FTOQ9C0B1 505 aaKnown RBP eCLIP9.26□□□□□ -0.93
TOPBP1-202ENST00000503338 SLC38A10Q9HBR0 1119 aa9.26□□□□□ -0.93
TOPBP1-202ENST00000503338 FAM13BQ9NYF5 915 aa9.26□□□□□ -0.93
TOPBP1-202ENST00000503338 KCNH4Q9UQ05 1017 aa9.26□□□□□ -0.93
TOPBP1-202ENST00000503338 PCDHB6Q9Y5E3 794 aa9.26□□□□□ -0.93
TOPBP1-202ENST00000503338 A0A0G2JLL6 359 aaPredicted RBP9.25□□□□□ -0.93
TOPBP1-202ENST00000503338 FAM237AA0A1B0GTK4 181 aa9.25□□□□□ -0.93
TOPBP1-202ENST00000503338 SPDYE3A6NKU9 549 aa9.25□□□□□ -0.93
TOPBP1-202ENST00000503338 GCOM1H8Y6P7 765 aaPredicted RBP9.25□□□□□ -0.93
TOPBP1-202ENST00000503338 ATP2A1O14983 1001 aa9.25□□□□□ -0.93
TOPBP1-202ENST00000503338 POLR2MP0CAP2 368 aa9.25□□□□□ -0.93
TOPBP1-202ENST00000503338 ATP2B1P20020 1258 aa9.25□□□□□ -0.93
TOPBP1-202ENST00000503338 MARCKSP29966 332 aaPredicted RBP9.25□□□□□ -0.93
TOPBP1-202ENST00000503338 HOXA7P31268 230 aaPredicted RBP9.25□□□□□ -0.93
TOPBP1-202ENST00000503338 DSG3P32926 999 aa9.25□□□□□ -0.93
TOPBP1-202ENST00000503338 CACNB1Q02641 598 aaPredicted RBP9.25□□□□□ -0.93
TOPBP1-202ENST00000503338 FAM160A1Q05DH4 1040 aa9.25□□□□□ -0.93
TOPBP1-202ENST00000503338 INF2Q27J81 1249 aa9.25□□□□□ -0.93
TOPBP1-202ENST00000503338 USH1GQ495M9 461 aa9.25□□□□□ -0.93
TOPBP1-202ENST00000503338 EARS2Q5JPH6 523 aaKnown RBP9.25□□□□□ -0.93
TOPBP1-202ENST00000503338 JAKMIP3Q5VZ66 844 aa9.25□□□□□ -0.93
TOPBP1-202ENST00000503338 PPP4R3AQ6IN85 833 aa9.25□□□□□ -0.93
TOPBP1-202ENST00000503338 PRRT2Q7Z6L0 340 aaPredicted RBP9.25□□□□□ -0.93
TOPBP1-202ENST00000503338 C2orf69Q8N8R5 385 aa9.25□□□□□ -0.93
TOPBP1-202ENST00000503338 FSIP1Q8NA03 581 aa9.25□□□□□ -0.93
TOPBP1-202ENST00000503338 TBCKQ8TEA7 893 aa9.25□□□□□ -0.93
TOPBP1-202ENST00000503338 GTF3C2Q8WUA4 911 aaPredicted RBP9.25□□□□□ -0.93
TOPBP1-202ENST00000503338 SLC10A4Q96EP9 437 aa9.25□□□□□ -0.93
TOPBP1-202ENST00000503338 BIN2Q9UBW5 565 aaPredicted RBP9.25□□□□□ -0.93
TOPBP1-202ENST00000503338 CCPG1Q9ULG6 757 aa9.25□□□□□ -0.93
TOPBP1-202ENST00000503338 VWA5AO00534 786 aa9.24□□□□□ -0.93
TOPBP1-202ENST00000503338 MEIS2O14770 477 aa9.24□□□□□ -0.93
TOPBP1-202ENST00000503338 CCNT1O60563 726 aaKnown RBP9.24□□□□□ -0.93
TOPBP1-202ENST00000503338 KINO60870 393 aaKnown RBP9.24□□□□□ -0.93
TOPBP1-202ENST00000503338 MCM7P33993 719 aa9.24□□□□□ -0.93
TOPBP1-202ENST00000503338 COPB2P35606 906 aa9.24□□□□□ -0.93
TOPBP1-202ENST00000503338 LONP1P36776 959 aaKnown RBP9.24□□□□□ -0.93
TOPBP1-202ENST00000503338 TXLNAP40222 546 aa9.24□□□□□ -0.93
TOPBP1-202ENST00000503338 ZNF445P59923 1031 aa9.24□□□□□ -0.93
TOPBP1-202ENST00000503338 GHRHRQ02643 423 aa9.24□□□□□ -0.93
TOPBP1-202ENST00000503338 PTGDRQ13258 359 aa9.24□□□□□ -0.93
TOPBP1-202ENST00000503338 SNAPC2Q13487 334 aa9.24□□□□□ -0.93
TOPBP1-202ENST00000503338 ZNF174Q15697 407 aa9.24□□□□□ -0.93
TOPBP1-202ENST00000503338 LETM2Q2VYF4 491 aa9.24□□□□□ -0.93
TOPBP1-202ENST00000503338 AXDND1Q5T1B0 1012 aaPredicted RBP9.24□□□□□ -0.93
TOPBP1-202ENST00000503338 RESP18Q5W5W9 173 aa9.24□□□□□ -0.93
TOPBP1-202ENST00000503338 MAP1SQ66K74 1059 aaPredicted RBP9.24□□□□□ -0.93
TOPBP1-202ENST00000503338 CCDC174Q6PII3 467 aa9.24□□□□□ -0.93
TOPBP1-202ENST00000503338 RASGRP4Q8TDF6 673 aa9.24□□□□□ -0.93
TOPBP1-202ENST00000503338 OTUD5Q96G74 571 aa9.24□□□□□ -0.93
TOPBP1-202ENST00000503338 TIGD1Q96MW7 591 aa9.24□□□□□ -0.93
TOPBP1-202ENST00000503338 ANO3Q9BYT9 981 aa9.24□□□□□ -0.93
TOPBP1-202ENST00000503338 RAB34Q9BZG1 259 aa9.24□□□□□ -0.93
TOPBP1-202ENST00000503338 NUP62CLQ9H1M0 184 aa9.24□□□□□ -0.93
TOPBP1-202ENST00000503338 ELP3Q9H9T3 547 aa9.24□□□□□ -0.93
TOPBP1-202ENST00000503338 GBA2Q9HCG7 927 aaPredicted RBP9.24□□□□□ -0.93
TOPBP1-202ENST00000503338 FBXO28Q9NVF7 368 aa9.24□□□□□ -0.93
TOPBP1-202ENST00000503338 DACT1Q9NYF0 836 aa9.24□□□□□ -0.93
TOPBP1-202ENST00000503338 USP25Q9UHP3 1055 aa9.24□□□□□ -0.93
TOPBP1-202ENST00000503338 HOOK1Q9UJC3 728 aaKnown RBP9.24□□□□□ -0.93
TOPBP1-202ENST00000503338 FBXO2Q9UK22 296 aaPredicted RBP9.24□□□□□ -0.93
TOPBP1-202ENST00000503338 ADAMTS5Q9UNA0 930 aa9.24□□□□□ -0.93
TOPBP1-202ENST00000503338 AGTPBP1Q9UPW5 1226 aa9.24□□□□□ -0.93
TOPBP1-202ENST00000503338 PAPPA2Q9BXP8 1791 aa9.24□□□□□ -0.93
TOPBP1-202ENST00000503338 FAM205CA6NFA0 338 aa9.23□□□□□ -0.93
TOPBP1-202ENST00000503338 IRF6O14896 467 aa9.23□□□□□ -0.93
TOPBP1-202ENST00000503338 NEMFO60524 1076 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms