RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 RNF146Q9NTX7 359 aa17.45■□□□□ 0.38
SEC61A1-207ENST00000498837 MSRAQ9UJ68 235 aa17.45■□□□□ 0.38
SEC61A1-207ENST00000498837 SYNPO2Q9UMS6 1093 aa17.45■□□□□ 0.38
SEC61A1-207ENST00000498837 PRRC2BQ5JSZ5 2229 aaKnown RBP17.45■□□□□ 0.38
SEC61A1-207ENST00000498837 GRIN2DO15399 1336 aa17.45■□□□□ 0.38
SEC61A1-207ENST00000498837 PLIN4Q96Q06 1357 aa17.44■□□□□ 0.38
SEC61A1-207ENST00000498837 DYNC1LI2O43237 492 aaPredicted RBP17.44■□□□□ 0.38
SEC61A1-207ENST00000498837 TSPY3P0CV98 308 aa17.44■□□□□ 0.38
SEC61A1-207ENST00000498837 TSPY8P0CW00 308 aa17.44■□□□□ 0.38
SEC61A1-207ENST00000498837 FDX1P10109 184 aa17.44■□□□□ 0.38
SEC61A1-207ENST00000498837 GNAT2P19087 354 aa17.44■□□□□ 0.38
SEC61A1-207ENST00000498837 IGFBP4P22692 258 aa17.44■□□□□ 0.38
SEC61A1-207ENST00000498837 STAT2P52630 851 aa17.44■□□□□ 0.38
SEC61A1-207ENST00000498837 CCL23P55773 120 aa17.44■□□□□ 0.38
SEC61A1-207ENST00000498837 SNAP25P60880 206 aa17.44■□□□□ 0.38
SEC61A1-207ENST00000498837 TFAP4Q01664 338 aa17.44■□□□□ 0.38
SEC61A1-207ENST00000498837 ITGA7Q13683 1181 aa17.44■□□□□ 0.38
SEC61A1-207ENST00000498837 TMEM63BQ5T3F8 832 aa17.44■□□□□ 0.38
SEC61A1-207ENST00000498837 C20orf194Q5TEA3 1177 aa17.44■□□□□ 0.38
SEC61A1-207ENST00000498837 OTOP2Q7RTS6 562 aa17.44■□□□□ 0.38
SEC61A1-207ENST00000498837 ATXN2LQ8WWM7 1075 aaKnown RBP17.44■□□□□ 0.38
SEC61A1-207ENST00000498837 TRERF1Q96PN7 1200 aa17.44■□□□□ 0.38
SEC61A1-207ENST00000498837 SEC62Q99442 399 aaKnown RBP17.44■□□□□ 0.38
SEC61A1-207ENST00000498837 HIPK3Q9H422 1215 aa17.44■□□□□ 0.38
SEC61A1-207ENST00000498837 YBX2Q9Y2T7 364 aaKnown RBP17.44■□□□□ 0.38
SEC61A1-207ENST00000498837 TET1Q8NFU7 2136 aa17.44■□□□□ 0.38
SEC61A1-207ENST00000498837 ASB14A6NK59 587 aa17.43■□□□□ 0.38
SEC61A1-207ENST00000498837 ZFYP08048 801 aaPredicted RBP17.43■□□□□ 0.38
SEC61A1-207ENST00000498837 ALAS1P13196 640 aa17.43■□□□□ 0.38
SEC61A1-207ENST00000498837 SMPD1P17405 629 aa17.43■□□□□ 0.38
SEC61A1-207ENST00000498837 COL9A1P20849 921 aa17.43■□□□□ 0.38
SEC61A1-207ENST00000498837 MCCP23508 829 aa17.43■□□□□ 0.38
SEC61A1-207ENST00000498837 IKQ13123 557 aaPredicted RBP17.43■□□□□ 0.38
SEC61A1-207ENST00000498837 RAB30Q15771 203 aa17.43■□□□□ 0.38
SEC61A1-207ENST00000498837 FSCN1Q16658 493 aaKnown RBP17.43■□□□□ 0.38
SEC61A1-207ENST00000498837 EEPD1Q7L9B9 569 aa17.43■□□□□ 0.38
SEC61A1-207ENST00000498837 CHURC1Q8WUH1 139 aa17.43■□□□□ 0.38
SEC61A1-207ENST00000498837 STAG1Q8WVM7 1258 aa17.43■□□□□ 0.38
SEC61A1-207ENST00000498837 ASB2Q96Q27 587 aa17.43■□□□□ 0.38
SEC61A1-207ENST00000498837 AP5M1Q9H0R1 490 aa17.43■□□□□ 0.38
SEC61A1-207ENST00000498837 TRPV6Q9H1D0 765 aa17.43■□□□□ 0.38
SEC61A1-207ENST00000498837 THEGQ9P2T0 379 aa17.43■□□□□ 0.38
SEC61A1-207ENST00000498837 CABYRO75952 493 aa17.42■□□□□ 0.38
SEC61A1-207ENST00000498837 PSMC6P62333 389 aa17.42■□□□□ 0.38
SEC61A1-207ENST00000498837 PDE4BQ07343 736 aa17.42■□□□□ 0.38
SEC61A1-207ENST00000498837 MUM1L1Q5H9M0 696 aa17.42■□□□□ 0.38
SEC61A1-207ENST00000498837 TAPT1Q6NXT6 567 aa17.42■□□□□ 0.38
SEC61A1-207ENST00000498837 KCTD1Q719H9 257 aa17.42■□□□□ 0.38
SEC61A1-207ENST00000498837 FAM160B2Q86V87 743 aa17.42■□□□□ 0.38
SEC61A1-207ENST00000498837 GMCL1Q96IK5 515 aa17.42■□□□□ 0.38
SEC61A1-207ENST00000498837 NOC4LQ9BVI4 516 aaKnown RBP17.42■□□□□ 0.38
SEC61A1-207ENST00000498837 WNT8AQ9H1J5 351 aa17.42■□□□□ 0.38
SEC61A1-207ENST00000498837 SLC28A3Q9HAS3 691 aa17.42■□□□□ 0.38
SEC61A1-207ENST00000498837 SCN10AQ9Y5Y9 1956 aa17.41■□□□□ 0.38
SEC61A1-207ENST00000498837 B4GALT4O60513 344 aa17.41■□□□□ 0.38
SEC61A1-207ENST00000498837 SLC1A4P43007 532 aa17.41■□□□□ 0.38
SEC61A1-207ENST00000498837 RABGGTBP53611 331 aa17.41■□□□□ 0.38
SEC61A1-207ENST00000498837 TKFCQ3LXA3 575 aa17.41■□□□□ 0.38
SEC61A1-207ENST00000498837 RASGRP2Q7LDG7 609 aa17.41■□□□□ 0.38
SEC61A1-207ENST00000498837 FBXO16Q8IX29 292 aaPredicted RBP17.41■□□□□ 0.38
SEC61A1-207ENST00000498837 VWCEQ96DN2 955 aa17.41■□□□□ 0.38
SEC61A1-207ENST00000498837 GPATCH3Q96I76 525 aa17.41■□□□□ 0.38
SEC61A1-207ENST00000498837 PURBQ96QR8 312 aaKnown RBP17.41■□□□□ 0.38
SEC61A1-207ENST00000498837 MTIF3Q9H2K0 278 aaKnown RBP17.41■□□□□ 0.38
SEC61A1-207ENST00000498837 RAPGEFL1Q9UHV5 662 aa17.41■□□□□ 0.38
SEC61A1-207ENST00000498837 MYOGP15173 224 aa17.4■□□□□ 0.38
SEC61A1-207ENST00000498837 MRPS5P82675 430 aaKnown RBP17.4■□□□□ 0.38
SEC61A1-207ENST00000498837 PPARAQ07869 468 aa17.4■□□□□ 0.38
SEC61A1-207ENST00000498837 IQSEC1Q6DN90 963 aa17.4■□□□□ 0.38
SEC61A1-207ENST00000498837 ADAMTS19Q8TE59 1207 aa17.4■□□□□ 0.38
SEC61A1-207ENST00000498837 SCLYQ96I15 445 aa17.4■□□□□ 0.38
SEC61A1-207ENST00000498837 NACAP1Q9BZK3 213 aa17.4■□□□□ 0.38
SEC61A1-207ENST00000498837 DCTPP1Q9H773 170 aa17.4■□□□□ 0.38
SEC61A1-207ENST00000498837 INCENPQ9NQS7 918 aa17.4■□□□□ 0.38
SEC61A1-207ENST00000498837 CYP39A1Q9NYL5 469 aa17.4■□□□□ 0.38
SEC61A1-207ENST00000498837 RCAN3Q9UKA8 241 aa17.4■□□□□ 0.38
SEC61A1-207ENST00000498837 PTPRSQ13332 1948 aa17.4■□□□□ 0.38
SEC61A1-207ENST00000498837 ZEB2O60315 1214 aa17.39■□□□□ 0.37
SEC61A1-207ENST00000498837 NMT2O60551 498 aa17.39■□□□□ 0.37
SEC61A1-207ENST00000498837 PLA2G6O60733 806 aa17.39■□□□□ 0.37
SEC61A1-207ENST00000498837 RCSD1Q6JBY9 416 aa17.39■□□□□ 0.37
SEC61A1-207ENST00000498837 NAPBQ9H115 298 aa17.39■□□□□ 0.37
SEC61A1-207ENST00000498837 IL17RBQ9NRM6 502 aa17.39■□□□□ 0.37
SEC61A1-207ENST00000498837 PRR12Q9ULL5 1215 aa17.39■□□□□ 0.37
SEC61A1-207ENST00000498837 Q9Y3F1 56 aa17.39■□□□□ 0.37
SEC61A1-207ENST00000498837 TANC1Q9C0D5 1861 aa17.38■□□□□ 0.37
SEC61A1-207ENST00000498837 SLC3A2P08195 630 aaKnown RBP17.38■□□□□ 0.37
SEC61A1-207ENST00000498837 CTDSPL2Q05D32 466 aa17.38■□□□□ 0.37
SEC61A1-207ENST00000498837 NSMFQ6X4W1 530 aa17.38■□□□□ 0.37
SEC61A1-207ENST00000498837 KIAA1211Q6ZU35 1233 aa17.38■□□□□ 0.37
SEC61A1-207ENST00000498837 RPUSD2Q8IZ73 545 aaKnown RBP17.38■□□□□ 0.37
SEC61A1-207ENST00000498837 SEZ6LQ9BYH1 1024 aa17.38■□□□□ 0.37
SEC61A1-207ENST00000498837 STX8Q9UNK0 236 aa17.38■□□□□ 0.37
SEC61A1-207ENST00000498837 MTMR7Q9Y216 660 aa17.38■□□□□ 0.37
SEC61A1-207ENST00000498837 SLC4A7Q9Y6M7 1214 aa17.38■□□□□ 0.37
SEC61A1-207ENST00000498837 MYH6P13533 1939 aa17.37■□□□□ 0.37
SEC61A1-207ENST00000498837 ZBBXA8MT70 800 aa17.37■□□□□ 0.37
SEC61A1-207ENST00000498837 FOXP2O15409 715 aa17.37■□□□□ 0.37
SEC61A1-207ENST00000498837 ZMYM1Q5SVZ6 1142 aa17.37■□□□□ 0.37
SEC61A1-207ENST00000498837 MORC4Q8TE76 937 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms