RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 PNMA6FA0A0J9YX94 578 aa18.05■□□□□ 0.48
CPNE1-228ENST00000498814 CCDC196A0A1B0GTZ2 297 aa18.05■□□□□ 0.48
CPNE1-228ENST00000498814 COBLO75128 1261 aa18.05■□□□□ 0.48
CPNE1-228ENST00000498814 PDIA3P30101 505 aaKnown RBP18.05■□□□□ 0.48
CPNE1-228ENST00000498814 METAP2P50579 478 aaKnown RBP eCLIP18.05■□□□□ 0.48
CPNE1-228ENST00000498814 NEK4P51957 841 aa18.05■□□□□ 0.48
CPNE1-228ENST00000498814 TRAF1Q13077 416 aa18.05■□□□□ 0.48
CPNE1-228ENST00000498814 ANKRD1Q15327 319 aa18.05■□□□□ 0.48
CPNE1-228ENST00000498814 SLC9C1Q4G0N8 1177 aa18.05■□□□□ 0.48
CPNE1-228ENST00000498814 MUM1L1Q5H9M0 696 aa18.05■□□□□ 0.48
CPNE1-228ENST00000498814 DPP9Q86TI2 863 aa18.05■□□□□ 0.48
CPNE1-228ENST00000498814 TRMT44Q8IYL2 757 aaKnown RBP18.05■□□□□ 0.48
CPNE1-228ENST00000498814 AMNQ9BXJ7 453 aa18.05■□□□□ 0.48
CPNE1-228ENST00000498814 SLC5A4Q9NY91 659 aa18.05■□□□□ 0.48
CPNE1-228ENST00000498814 ABCB11O95342 1321 aa18.04■□□□□ 0.48
CPNE1-228ENST00000498814 DNAJC25-GNG10A0A024R161 153 aa18.04■□□□□ 0.48
CPNE1-228ENST00000498814 TAL1P17542 331 aaPredicted RBP18.04■□□□□ 0.48
CPNE1-228ENST00000498814 CDC27P30260 824 aa18.04■□□□□ 0.48
CPNE1-228ENST00000498814 FUT2Q10981 343 aa18.04■□□□□ 0.48
CPNE1-228ENST00000498814 USH1GQ495M9 461 aa18.04■□□□□ 0.48
CPNE1-228ENST00000498814 HOMER1Q86YM7 354 aa18.04■□□□□ 0.48
CPNE1-228ENST00000498814 CMTR1Q8N1G2 835 aaKnown RBP18.04■□□□□ 0.48
CPNE1-228ENST00000498814 ANKRD35Q8N283 1001 aa18.04■□□□□ 0.48
CPNE1-228ENST00000498814 CLEC4DQ8WXI8 215 aa18.04■□□□□ 0.48
CPNE1-228ENST00000498814 ARMC5Q96C12 935 aa18.04■□□□□ 0.48
CPNE1-228ENST00000498814 RRP36Q96EU6 259 aaKnown RBP18.04■□□□□ 0.48
CPNE1-228ENST00000498814 DDX11Q96FC9 970 aa18.04■□□□□ 0.48
CPNE1-228ENST00000498814 MAF1Q9H063 256 aa18.04■□□□□ 0.48
CPNE1-228ENST00000498814 A1CFQ9NQ94 594 aaKnown RBP18.04■□□□□ 0.48
CPNE1-228ENST00000498814 DIS3Q9Y2L1 958 aaKnown RBP18.04■□□□□ 0.48
CPNE1-228ENST00000498814 PFASO15067 1338 aa18.03■□□□□ 0.48
CPNE1-228ENST00000498814 PPP1R11O60927 126 aaPredicted RBP18.03■□□□□ 0.48
CPNE1-228ENST00000498814 ELNP15502 786 aa18.03■□□□□ 0.48
CPNE1-228ENST00000498814 AK2P54819 239 aa18.03■□□□□ 0.48
CPNE1-228ENST00000498814 ZNF792Q3KQV3 632 aa18.03■□□□□ 0.48
CPNE1-228ENST00000498814 RGS22Q8NE09 1264 aa18.03■□□□□ 0.48
CPNE1-228ENST00000498814 NPLOC4Q8TAT6 608 aa18.03■□□□□ 0.48
CPNE1-228ENST00000498814 SH3TC2Q8TF17 1288 aa18.03■□□□□ 0.48
CPNE1-228ENST00000498814 TBC1D32Q96NH3 1257 aa18.03■□□□□ 0.48
CPNE1-228ENST00000498814 CNTNAP5Q8WYK1 1306 aa18.02■□□□□ 0.48
CPNE1-228ENST00000498814 LCTP09848 1927 aa18.02■□□□□ 0.48
CPNE1-228ENST00000498814 NFIBO00712 420 aa18.02■□□□□ 0.48
CPNE1-228ENST00000498814 HMGCRP04035 888 aa18.02■□□□□ 0.48
CPNE1-228ENST00000498814 PGK2P07205 417 aa18.02■□□□□ 0.48
CPNE1-228ENST00000498814 ADD1P35611 737 aaKnown RBP18.02■□□□□ 0.48
CPNE1-228ENST00000498814 CCL14Q16627 93 aa18.02■□□□□ 0.48
CPNE1-228ENST00000498814 OLFML2BQ68BL8 750 aa18.02■□□□□ 0.48
CPNE1-228ENST00000498814 CCDC82Q8N4S0 544 aa18.02■□□□□ 0.48
CPNE1-228ENST00000498814 TRIB2Q92519 343 aa18.02■□□□□ 0.48
CPNE1-228ENST00000498814 ABHD8Q96I13 439 aa18.02■□□□□ 0.48
CPNE1-228ENST00000498814 LARP6Q9BRS8 491 aaKnown RBP18.02■□□□□ 0.48
CPNE1-228ENST00000498814 CYP39A1Q9NYL5 469 aa18.02■□□□□ 0.48
CPNE1-228ENST00000498814 SEC63Q9UGP8 760 aaKnown RBP18.02■□□□□ 0.48
CPNE1-228ENST00000498814 MRPL11Q9Y3B7 192 aaKnown RBP18.02■□□□□ 0.48
CPNE1-228ENST00000498814 PCDHA1Q9Y5I3 950 aa18.02■□□□□ 0.48
CPNE1-228ENST00000498814 IGHA2P01877 340 aa18.01■□□□□ 0.47
CPNE1-228ENST00000498814 NSMFQ6X4W1 530 aa18.01■□□□□ 0.47
CPNE1-228ENST00000498814 IL27Q8NEV9 243 aa18.01■□□□□ 0.47
CPNE1-228ENST00000498814 PIBF1Q8WXW3 757 aa18.01■□□□□ 0.47
CPNE1-228ENST00000498814 MAML3Q96JK9 1138 aa18.01■□□□□ 0.47
CPNE1-228ENST00000498814 ZNF333Q96JL9 665 aa18.01■□□□□ 0.47
CPNE1-228ENST00000498814 TPCN1Q9ULQ1 816 aa18.01■□□□□ 0.47
CPNE1-228ENST00000498814 CENPFP49454 3210 aa18.01■□□□□ 0.47
CPNE1-228ENST00000498814 POTEB2H3BUK9 544 aa18■□□□□ 0.47
CPNE1-228ENST00000498814 UBXN2AP68543 259 aa18■□□□□ 0.47
CPNE1-228ENST00000498814 CCT2P78371 535 aaKnown RBP18■□□□□ 0.47
CPNE1-228ENST00000498814 RABEP1Q15276 862 aa18■□□□□ 0.47
CPNE1-228ENST00000498814 NTRK3Q16288 839 aa18■□□□□ 0.47
CPNE1-228ENST00000498814 RNF207Q6ZRF8 634 aa18■□□□□ 0.47
CPNE1-228ENST00000498814 ZNF467Q7Z7K2 595 aaPredicted RBP18■□□□□ 0.47
CPNE1-228ENST00000498814 MCF2L2Q86YR7 1114 aa18■□□□□ 0.47
CPNE1-228ENST00000498814 FAM133AQ8N9E0 248 aa18■□□□□ 0.47
CPNE1-228ENST00000498814 NCOA5Q9HCD5 579 aaKnown RBP18■□□□□ 0.47
CPNE1-228ENST00000498814 FLRT1Q9NZU1 646 aa18■□□□□ 0.47
CPNE1-228ENST00000498814 BIN2Q9UBW5 565 aaPredicted RBP18■□□□□ 0.47
CPNE1-228ENST00000498814 MCM3APO60318 1980 aa17.99■□□□□ 0.47
CPNE1-228ENST00000498814 INHAP05111 366 aa17.99■□□□□ 0.47
CPNE1-228ENST00000498814 GHRHRQ02643 423 aa17.99■□□□□ 0.47
CPNE1-228ENST00000498814 BAATQ14032 418 aaPredicted RBP17.99■□□□□ 0.47
CPNE1-228ENST00000498814 MFSD14CQ5VZR4 134 aa17.99■□□□□ 0.47
CPNE1-228ENST00000498814 MSL3Q8N5Y2 521 aaKnown RBP17.99■□□□□ 0.47
CPNE1-228ENST00000498814 V9GY48 417 aaPredicted RBP17.99■□□□□ 0.47
CPNE1-228ENST00000498814 hCG_1642624A0A1W2PR95 340 aa17.98■□□□□ 0.47
CPNE1-228ENST00000498814 PTPDC1A2A3K4 754 aa17.98■□□□□ 0.47
CPNE1-228ENST00000498814 OPLAHO14841 1288 aa17.98■□□□□ 0.47
CPNE1-228ENST00000498814 PFKFB2O60825 505 aa17.98■□□□□ 0.47
CPNE1-228ENST00000498814 IFNAR1P17181 557 aa17.98■□□□□ 0.47
CPNE1-228ENST00000498814 RPS6P62753 249 aaKnown RBP17.98■□□□□ 0.47
CPNE1-228ENST00000498814 CNTN2Q02246 1040 aa17.98■□□□□ 0.47
CPNE1-228ENST00000498814 STK3Q13188 491 aa17.98■□□□□ 0.47
CPNE1-228ENST00000498814 MAP3K21Q5TCX8 1036 aa17.98■□□□□ 0.47
CPNE1-228ENST00000498814 MAMDC4Q6UXC1 1216 aa17.98■□□□□ 0.47
CPNE1-228ENST00000498814 SAMD3Q8N6K7 520 aa17.98■□□□□ 0.47
CPNE1-228ENST00000498814 FGD4Q96M96 766 aa17.98■□□□□ 0.47
CPNE1-228ENST00000498814 TINF2Q9BSI4 451 aa17.98■□□□□ 0.47
CPNE1-228ENST00000498814 SLKQ9H2G2 1235 aaPredicted RBP17.98■□□□□ 0.47
CPNE1-228ENST00000498814 MAP3K20Q9NYL2 800 aaKnown RBP17.98■□□□□ 0.47
CPNE1-228ENST00000498814 RBM27Q9P2N5 1060 aaKnown RBP17.98■□□□□ 0.47
CPNE1-228ENST00000498814 SOWAHBA6NEL2 793 aa17.97■□□□□ 0.47
CPNE1-228ENST00000498814 PRPF3O43395 683 aaKnown RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms