RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 CYP2C19P33261 490 aa6.89□□□□□ -1.31
SPTA1-209ENST00000498708 GSK3AP49840 483 aa6.89□□□□□ -1.31
SPTA1-209ENST00000498708 HMGCS2P54868 508 aa6.89□□□□□ -1.31
SPTA1-209ENST00000498708 MARSP56192 900 aaKnown RBP6.89□□□□□ -1.31
SPTA1-209ENST00000498708 CAVIN4Q5BKX8 364 aa6.89□□□□□ -1.31
SPTA1-209ENST00000498708 TMEM240Q5SV17 173 aa6.89□□□□□ -1.31
SPTA1-209ENST00000498708 C1orf53Q5VUE5 145 aa6.89□□□□□ -1.31
SPTA1-209ENST00000498708 MFSD14CQ5VZR4 134 aa6.89□□□□□ -1.31
SPTA1-209ENST00000498708 KRT40Q6A162 431 aa6.89□□□□□ -1.31
SPTA1-209ENST00000498708 HHIPL2Q6UWX4 724 aa6.89□□□□□ -1.31
SPTA1-209ENST00000498708 RIPOR1Q6ZS17 1223 aa6.89□□□□□ -1.31
SPTA1-209ENST00000498708 FBXO33Q7Z6M2 555 aa6.89□□□□□ -1.31
SPTA1-209ENST00000498708 ARRDC4Q8NCT1 418 aa6.89□□□□□ -1.31
SPTA1-209ENST00000498708 GPRC5AQ8NFJ5 357 aa6.89□□□□□ -1.31
SPTA1-209ENST00000498708 HERVK_113Q902F9 699 aa6.89□□□□□ -1.31
SPTA1-209ENST00000498708 APBA2Q99767 749 aa6.89□□□□□ -1.31
SPTA1-209ENST00000498708 ENAMQ9NRM1 1142 aa6.89□□□□□ -1.31
SPTA1-209ENST00000498708 RBPJLQ9UBG7 517 aa6.89□□□□□ -1.31
SPTA1-209ENST00000498708 LRRFIP2Q9Y608 721 aaKnown RBP6.89□□□□□ -1.31
SPTA1-209ENST00000498708 ZFHX2Q9C0A1 2572 aaPredicted RBP6.89□□□□□ -1.31
SPTA1-209ENST00000498708 DNAH14Q0VDD8 3507 aa6.89□□□□□ -1.31
SPTA1-209ENST00000498708 CACNA1BQ00975 2339 aa6.88□□□□□ -1.31
SPTA1-209ENST00000498708 BRWD1Q9NSI6 2320 aa6.88□□□□□ -1.31
SPTA1-209ENST00000498708 SMCHD1A6NHR9 2005 aa6.88□□□□□ -1.31
SPTA1-209ENST00000498708 UTYO14607 1347 aa6.88□□□□□ -1.31
SPTA1-209ENST00000498708 MROH5Q6ZUA9 1318 aa6.88□□□□□ -1.31
SPTA1-209ENST00000498708 SPATA31C2B4DYI2 1134 aa6.88□□□□□ -1.31
SPTA1-209ENST00000498708 KBTBD13C9JR72 458 aa6.88□□□□□ -1.31
SPTA1-209ENST00000498708 TRAK2O60296 914 aa6.88□□□□□ -1.31
SPTA1-209ENST00000498708 MSCO60682 206 aa6.88□□□□□ -1.31
SPTA1-209ENST00000498708 KRT37O76014 449 aa6.88□□□□□ -1.31
SPTA1-209ENST00000498708 ARHGEF15O94989 841 aa6.88□□□□□ -1.31
SPTA1-209ENST00000498708 MAPK4P31152 587 aa6.88□□□□□ -1.31
SPTA1-209ENST00000498708 ZEB1P37275 1124 aaPredicted RBP6.88□□□□□ -1.31
SPTA1-209ENST00000498708 FAAP100Q0VG06 881 aa6.88□□□□□ -1.31
SPTA1-209ENST00000498708 POU4F2Q12837 409 aa6.88□□□□□ -1.31
SPTA1-209ENST00000498708 PLEKHH3Q7Z736 793 aa6.88□□□□□ -1.31
SPTA1-209ENST00000498708 ANKRD44Q8N8A2 993 aa6.88□□□□□ -1.31
SPTA1-209ENST00000498708 NPLOC4Q8TAT6 608 aa6.88□□□□□ -1.31
SPTA1-209ENST00000498708 WHAMMQ8TF30 809 aa6.88□□□□□ -1.31
SPTA1-209ENST00000498708 TBC1D22AQ8WUA7 517 aa6.88□□□□□ -1.31
SPTA1-209ENST00000498708 ZNF837Q96EG3 531 aaPredicted RBP6.88□□□□□ -1.31
SPTA1-209ENST00000498708 EDC3Q96F86 508 aaKnown RBP6.88□□□□□ -1.31
SPTA1-209ENST00000498708 SCARF2Q96GP6 870 aaPredicted RBP6.88□□□□□ -1.31
SPTA1-209ENST00000498708 TRERF1Q96PN7 1200 aa6.88□□□□□ -1.31
SPTA1-209ENST00000498708 GRIP2Q9C0E4 1043 aa6.88□□□□□ -1.31
SPTA1-209ENST00000498708 TMEM39AQ9NV64 488 aa6.88□□□□□ -1.31
SPTA1-209ENST00000498708 USP40Q9NVE5 1235 aa6.88□□□□□ -1.31
SPTA1-209ENST00000498708 MSRAQ9UJ68 235 aa6.88□□□□□ -1.31
SPTA1-209ENST00000498708 MTCH2Q9Y6C9 303 aa6.88□□□□□ -1.31
SPTA1-209ENST00000498708 ATAD5Q96QE3 1844 aa6.87□□□□□ -1.31
SPTA1-209ENST00000498708 DDTLA6NHG4 134 aaPredicted RBP6.87□□□□□ -1.31
SPTA1-209ENST00000498708 FAM196BA6NMK8 535 aa6.87□□□□□ -1.31
SPTA1-209ENST00000498708 PQBP1O60828 265 aaKnown RBP6.87□□□□□ -1.31
SPTA1-209ENST00000498708 PDE8BO95263 885 aa6.87□□□□□ -1.31
SPTA1-209ENST00000498708 ACRP10323 421 aa6.87□□□□□ -1.31
SPTA1-209ENST00000498708 MYOGP15173 224 aa6.87□□□□□ -1.31
SPTA1-209ENST00000498708 SCTRP47872 440 aa6.87□□□□□ -1.31
SPTA1-209ENST00000498708 RABGGTBP53611 331 aa6.87□□□□□ -1.31
SPTA1-209ENST00000498708 HERVK_113P62684 666 aa6.87□□□□□ -1.31
SPTA1-209ENST00000498708 ERVK-24P63145 666 aa6.87□□□□□ -1.31
SPTA1-209ENST00000498708 PABPC4Q13310 644 aaKnown RBP eCLIP6.87□□□□□ -1.31
SPTA1-209ENST00000498708 GAS6Q14393 721 aa6.87□□□□□ -1.31
SPTA1-209ENST00000498708 RRP1BQ14684 758 aaKnown RBP6.87□□□□□ -1.31
SPTA1-209ENST00000498708 LRRC41Q15345 812 aa6.87□□□□□ -1.31
SPTA1-209ENST00000498708 KANK3Q6NY19 840 aa6.87□□□□□ -1.31
SPTA1-209ENST00000498708 ZNF365Q70YC5 407 aa6.87□□□□□ -1.31
SPTA1-209ENST00000498708 TAS1R3Q7RTX0 852 aa6.87□□□□□ -1.31
SPTA1-209ENST00000498708 SLC44A5Q8NCS7 719 aa6.87□□□□□ -1.31
SPTA1-209ENST00000498708 ZNF280CQ8ND82 737 aa6.87□□□□□ -1.31
SPTA1-209ENST00000498708 SIL1Q9H173 461 aa6.87□□□□□ -1.31
SPTA1-209ENST00000498708 KCNH6Q9H252 994 aa6.87□□□□□ -1.31
SPTA1-209ENST00000498708 OSBPL3Q9H4L5 887 aa6.87□□□□□ -1.31
SPTA1-209ENST00000498708 SLC28A3Q9HAS3 691 aa6.87□□□□□ -1.31
SPTA1-209ENST00000498708 ARHGEF10LQ9HCE6 1279 aa6.87□□□□□ -1.31
SPTA1-209ENST00000498708 COG5Q9UP83 839 aa6.87□□□□□ -1.31
SPTA1-209ENST00000498708 TIMP1P01033 207 aa6.86□□□□□ -1.31
SPTA1-209ENST00000498708 IGHA2P01877 340 aa6.86□□□□□ -1.31
SPTA1-209ENST00000498708 IFIT1P09914 478 aaKnown RBP6.86□□□□□ -1.31
SPTA1-209ENST00000498708 CYBAP13498 195 aa6.86□□□□□ -1.31
SPTA1-209ENST00000498708 CSF2RAP15509 400 aa6.86□□□□□ -1.31
SPTA1-209ENST00000498708 RGS3P49796 1198 aa6.86□□□□□ -1.31
SPTA1-209ENST00000498708 IRX3P78415 501 aaPredicted RBP6.86□□□□□ -1.31
SPTA1-209ENST00000498708 ATP2B2Q01814 1243 aa6.86□□□□□ -1.31
SPTA1-209ENST00000498708 RAB30Q15771 203 aa6.86□□□□□ -1.31
SPTA1-209ENST00000498708 DBN1Q16643 649 aa6.86□□□□□ -1.31
SPTA1-209ENST00000498708 PRAMEF19Q5SWL8 479 aa6.86□□□□□ -1.31
SPTA1-209ENST00000498708 MFSD5Q6N075 450 aa6.86□□□□□ -1.31
SPTA1-209ENST00000498708 CCAR1Q8IX12 1150 aaKnown RBP6.86□□□□□ -1.31
SPTA1-209ENST00000498708 GJD3Q8N144 294 aa6.86□□□□□ -1.31
SPTA1-209ENST00000498708 KCTD17Q8N5Z5 321 aa6.86□□□□□ -1.31
SPTA1-209ENST00000498708 PAGR1Q9BTK6 254 aa6.86□□□□□ -1.31
SPTA1-209ENST00000498708 TIMMDC1Q9NPL8 285 aa6.86□□□□□ -1.31
SPTA1-209ENST00000498708 SNRKQ9NRH2 765 aa6.86□□□□□ -1.31
SPTA1-209ENST00000498708 CEP126Q9P2H0 1117 aa6.86□□□□□ -1.31
SPTA1-209ENST00000498708 A0A0G2JMZ2 1700 aa6.86□□□□□ -1.31
SPTA1-209ENST00000498708 KMT2BQ9UMN6 2715 aaPredicted RBP6.85□□□□□ -1.31
SPTA1-209ENST00000498708 MAST3O60307 1309 aa6.85□□□□□ -1.31
SPTA1-209ENST00000498708 EPOPA6NHQ4 379 aa6.85□□□□□ -1.31
SPTA1-209ENST00000498708 F11P03951 625 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms