RNA–Protein interactions for RNA: ENST00000498595.5

HDLBP-247, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-247ENST00000498595 CYP39A1Q9NYL5 469 aa17.03■□□□□ 0.32
HDLBP-247ENST00000498595 ADD3Q9UEY8 706 aaKnown RBP17.03■□□□□ 0.32
HDLBP-247ENST00000498595 TRIM43BA6NCK2 446 aa17.02■□□□□ 0.32
HDLBP-247ENST00000498595 ASGR1P07306 291 aa17.02■□□□□ 0.32
HDLBP-247ENST00000498595 TTBK2Q6IQ55 1244 aa17.02■□□□□ 0.32
HDLBP-247ENST00000498595 BTNL9Q6UXG8 535 aa17.02■□□□□ 0.32
HDLBP-247ENST00000498595 Q7L0L9 218 aa17.02■□□□□ 0.32
HDLBP-247ENST00000498595 RASGRP2Q7LDG7 609 aa17.02■□□□□ 0.32
HDLBP-247ENST00000498595 ANKRD33Q7Z3H0 272 aa17.02■□□□□ 0.32
HDLBP-247ENST00000498595 SH3RF1Q7Z6J0 888 aa17.02■□□□□ 0.32
HDLBP-247ENST00000498595 TRIM43Q96BQ3 446 aaPredicted RBP17.02■□□□□ 0.32
HDLBP-247ENST00000498595 MPHOSPH6Q99547 160 aaKnown RBP17.02■□□□□ 0.32
HDLBP-247ENST00000498595 UPF3AQ9H1J1 476 aaKnown RBP17.02■□□□□ 0.32
HDLBP-247ENST00000498595 SZT2Q5T011 3432 aa17.01■□□□□ 0.31
HDLBP-247ENST00000498595 A0A0U1RQG5 324 aaPredicted RBP17.01■□□□□ 0.31
HDLBP-247ENST00000498595 SOWAHBA6NEL2 793 aa17.01■□□□□ 0.31
HDLBP-247ENST00000498595 KIAA0355O15063 1070 aa17.01■□□□□ 0.31
HDLBP-247ENST00000498595 ZEB2O60315 1214 aa17.01■□□□□ 0.31
HDLBP-247ENST00000498595 PDHBP11177 359 aa17.01■□□□□ 0.31
HDLBP-247ENST00000498595 MUM1L1Q5H9M0 696 aa17.01■□□□□ 0.31
HDLBP-247ENST00000498595 SLC17A8Q8NDX2 589 aa17.01■□□□□ 0.31
HDLBP-247ENST00000498595 CTNNA3Q9UI47 895 aa17.01■□□□□ 0.31
HDLBP-247ENST00000498595 PTPDC1A2A3K4 754 aa17■□□□□ 0.31
HDLBP-247ENST00000498595 MYADML2A6NDP7 307 aa17■□□□□ 0.31
HDLBP-247ENST00000498595 TLR3O15455 904 aaKnown RBP17■□□□□ 0.31
HDLBP-247ENST00000498595 ZNF543Q08ER8 600 aa17■□□□□ 0.31
HDLBP-247ENST00000498595 SHHQ15465 462 aa17■□□□□ 0.31
HDLBP-247ENST00000498595 IMMTQ16891 758 aaKnown RBP17■□□□□ 0.31
HDLBP-247ENST00000498595 GPATCH4Q5T3I0 446 aaKnown RBP17■□□□□ 0.31
HDLBP-247ENST00000498595 CCSAPQ6IQ19 270 aaPredicted RBP17■□□□□ 0.31
HDLBP-247ENST00000498595 TBC1D10CQ8IV04 446 aa17■□□□□ 0.31
HDLBP-247ENST00000498595 KAT14Q9H8E8 782 aa17■□□□□ 0.31
HDLBP-247ENST00000498595 VTA1Q9NP79 307 aa17■□□□□ 0.31
HDLBP-247ENST00000498595 MTMR10Q9NXD2 777 aa17■□□□□ 0.31
HDLBP-247ENST00000498595 DNAH12Q6ZR08 3092 aa17■□□□□ 0.31
HDLBP-247ENST00000498595 CABYRO75952 493 aa16.99■□□□□ 0.31
HDLBP-247ENST00000498595 FPGSQ05932 587 aa16.99■□□□□ 0.31
HDLBP-247ENST00000498595 FAAP100Q0VG06 881 aa16.99■□□□□ 0.31
HDLBP-247ENST00000498595 BAATQ14032 418 aaPredicted RBP16.99■□□□□ 0.31
HDLBP-247ENST00000498595 ZNF697Q5TEC3 545 aa16.99■□□□□ 0.31
HDLBP-247ENST00000498595 IQSEC1Q6DN90 963 aa16.99■□□□□ 0.31
HDLBP-247ENST00000498595 FAM109BQ6ICB4 259 aaPredicted RBP16.99■□□□□ 0.31
HDLBP-247ENST00000498595 TLK2Q86UE8 772 aa16.99■□□□□ 0.31
HDLBP-247ENST00000498595 DGKHQ86XP1 1220 aa16.99■□□□□ 0.31
HDLBP-247ENST00000498595 KATNBL1Q9H079 304 aa16.99■□□□□ 0.31
HDLBP-247ENST00000498595 STXBP5LQ9Y2K9 1186 aa16.99■□□□□ 0.31
HDLBP-247ENST00000498595 LOC102724159A0A0B4J2E5 919 aa16.98■□□□□ 0.31
HDLBP-247ENST00000498595 B4DLN1 442 aa16.98■□□□□ 0.31
HDLBP-247ENST00000498595 ARVCFO00192 962 aa16.98■□□□□ 0.31
HDLBP-247ENST00000498595 ADCY6O43306 1168 aa16.98■□□□□ 0.31
HDLBP-247ENST00000498595 KDM4AO75164 1064 aa16.98■□□□□ 0.31
HDLBP-247ENST00000498595 MRPL12P52815 198 aaKnown RBP16.98■□□□□ 0.31
HDLBP-247ENST00000498595 PWP2Q15269 919 aaKnown RBP16.98■□□□□ 0.31
HDLBP-247ENST00000498595 FSCN1Q16658 493 aaKnown RBP16.98■□□□□ 0.31
HDLBP-247ENST00000498595 C9orf50Q5SZB4 431 aa16.98■□□□□ 0.31
HDLBP-247ENST00000498595 KIAA1211Q6ZU35 1233 aa16.98■□□□□ 0.31
HDLBP-247ENST00000498595 EEPD1Q7L9B9 569 aa16.98■□□□□ 0.31
HDLBP-247ENST00000498595 FBXO16Q8IX29 292 aaPredicted RBP16.98■□□□□ 0.31
HDLBP-247ENST00000498595 RNPC3Q96LT9 517 aaKnown RBP16.98■□□□□ 0.31
HDLBP-247ENST00000498595 ZKSCAN3Q9BRR0 538 aa16.98■□□□□ 0.31
HDLBP-247ENST00000498595 DSCC1Q9BVC3 393 aa16.98■□□□□ 0.31
HDLBP-247ENST00000498595 KRT23Q9C075 422 aa16.98■□□□□ 0.31
HDLBP-247ENST00000498595 CNNM2Q9H8M5 875 aa16.98■□□□□ 0.31
HDLBP-247ENST00000498595 LAMA3Q16787 3333 aa16.98■□□□□ 0.31
HDLBP-247ENST00000498595 NEDD4P46934 1319 aa16.97■□□□□ 0.31
HDLBP-247ENST00000498595 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.97■□□□□ 0.31
HDLBP-247ENST00000498595 NFIBO00712 420 aa16.97■□□□□ 0.31
HDLBP-247ENST00000498595 DYNC1LI2O43237 492 aaPredicted RBP16.97■□□□□ 0.31
HDLBP-247ENST00000498595 TIMP1P01033 207 aa16.97■□□□□ 0.31
HDLBP-247ENST00000498595 CALML3P27482 149 aa16.97■□□□□ 0.31
HDLBP-247ENST00000498595 BEX3Q00994 111 aa16.97■□□□□ 0.31
HDLBP-247ENST00000498595 RNF207Q6ZRF8 634 aa16.97■□□□□ 0.31
HDLBP-247ENST00000498595 PNMA1Q8ND90 353 aa16.97■□□□□ 0.31
HDLBP-247ENST00000498595 UBAC1Q9BSL1 405 aa16.97■□□□□ 0.31
HDLBP-247ENST00000498595 SEZ6LQ9BYH1 1024 aa16.97■□□□□ 0.31
HDLBP-247ENST00000498595 Q9Y3F1 56 aa16.97■□□□□ 0.31
HDLBP-247ENST00000498595 SUPT16HQ9Y5B9 1047 aaKnown RBP16.97■□□□□ 0.31
HDLBP-247ENST00000498595 LTBP2Q14767 1821 aa16.97■□□□□ 0.31
HDLBP-247ENST00000498595 WDR19Q8NEZ3 1342 aa16.96■□□□□ 0.31
HDLBP-247ENST00000498595 SMCHD1A6NHR9 2005 aa16.96■□□□□ 0.31
HDLBP-247ENST00000498595 SNHG28P0DPA3 235 aa16.96■□□□□ 0.31
HDLBP-247ENST00000498595 SMPD1P17405 629 aa16.96■□□□□ 0.31
HDLBP-247ENST00000498595 ALDH5A1P51649 535 aaPredicted RBP16.96■□□□□ 0.31
HDLBP-247ENST00000498595 NKX3-2P78367 333 aa16.96■□□□□ 0.31
HDLBP-247ENST00000498595 IRX5P78411 483 aaPredicted RBP16.96■□□□□ 0.31
HDLBP-247ENST00000498595 SMAD3P84022 425 aaKnown RBP16.96■□□□□ 0.31
HDLBP-247ENST00000498595 PDE4DQ08499 809 aa16.96■□□□□ 0.31
HDLBP-247ENST00000498595 BRDTQ58F21 947 aaPredicted RBP16.96■□□□□ 0.31
HDLBP-247ENST00000498595 ZSCAN10Q96SZ4 725 aaPredicted RBP16.96■□□□□ 0.31
HDLBP-247ENST00000498595 GNEQ9Y223 722 aaKnown RBP16.96■□□□□ 0.31
HDLBP-247ENST00000498595 B4E1Z4 1266 aa16.95■□□□□ 0.3
HDLBP-247ENST00000498595 DHX16O60231 1041 aaKnown RBP16.95■□□□□ 0.3
HDLBP-247ENST00000498595 ITGB8P26012 769 aa16.95■□□□□ 0.3
HDLBP-247ENST00000498595 CDK7P50613 346 aa16.95■□□□□ 0.3
HDLBP-247ENST00000498595 PPIGQ13427 754 aaKnown RBP eCLIP16.95■□□□□ 0.31e-7■□□□□ 9.2
HDLBP-247ENST00000498595 ASPRV1Q53RT3 343 aa16.95■□□□□ 0.3
HDLBP-247ENST00000498595 CXCL17Q6UXB2 119 aa16.95■□□□□ 0.3
HDLBP-247ENST00000498595 TMEM199Q8N511 208 aa16.95■□□□□ 0.3
HDLBP-247ENST00000498595 MORC4Q8TE76 937 aa16.95■□□□□ 0.3
HDLBP-247ENST00000498595 RUFY2Q8WXA3 655 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms