RNA–Protein interactions for RNA: ENST00000498544.5

ECHDC2-220, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 2

Gene ECHDC2, Length 985 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-220ENST00000498544 CDKL5O76039 1030 aa20.4■□□□□ 0.86
ECHDC2-220ENST00000498544 HOXD10P28358 340 aa20.4■□□□□ 0.86
ECHDC2-220ENST00000498544 PRMT2P55345 433 aa20.4■□□□□ 0.86
ECHDC2-220ENST00000498544 CAP1Q01518 475 aa20.4■□□□□ 0.86
ECHDC2-220ENST00000498544 SCRN1Q12765 414 aa20.4■□□□□ 0.86
ECHDC2-220ENST00000498544 NTRK3Q16288 839 aa20.4■□□□□ 0.86
ECHDC2-220ENST00000498544 USH1GQ495M9 461 aa20.4■□□□□ 0.86
ECHDC2-220ENST00000498544 GTF3C6Q969F1 213 aa20.4■□□□□ 0.86
ECHDC2-220ENST00000498544 TRERF1Q96PN7 1200 aa20.4■□□□□ 0.86
ECHDC2-220ENST00000498544 SH2B1Q9NRF2 756 aaPredicted RBP20.4■□□□□ 0.86
ECHDC2-220ENST00000498544 HOMER2Q9NSB8 354 aa20.4■□□□□ 0.86
ECHDC2-220ENST00000498544 SLC15A5A6NIM6 579 aa20.39■□□□□ 0.85
ECHDC2-220ENST00000498544 PPP1R11O60927 126 aaPredicted RBP20.39■□□□□ 0.85
ECHDC2-220ENST00000498544 LARGE1O95461 756 aa20.39■□□□□ 0.85
ECHDC2-220ENST00000498544 FCER1AP12319 257 aa20.39■□□□□ 0.85
ECHDC2-220ENST00000498544 SLC4A3P48751 1232 aa20.39■□□□□ 0.85
ECHDC2-220ENST00000498544 GRB14Q14449 540 aa20.39■□□□□ 0.85
ECHDC2-220ENST00000498544 OTOP1Q7RTM1 612 aa20.39■□□□□ 0.85
ECHDC2-220ENST00000498544 CTU1Q7Z7A3 348 aaKnown RBP20.39■□□□□ 0.85
ECHDC2-220ENST00000498544 RNF26Q9BY78 433 aaPredicted RBP20.39■□□□□ 0.85
ECHDC2-220ENST00000498544 PFASO15067 1338 aa20.38■□□□□ 0.85
ECHDC2-220ENST00000498544 MCM3APO60318 1980 aa20.38■□□□□ 0.85
ECHDC2-220ENST00000498544 ECM2O94769 699 aaPredicted RBP20.38■□□□□ 0.85
ECHDC2-220ENST00000498544 PTPREP23469 700 aa20.38■□□□□ 0.85
ECHDC2-220ENST00000498544 KCTD2Q14681 263 aa20.38■□□□□ 0.85
ECHDC2-220ENST00000498544 MORN1Q5T089 497 aa20.38■□□□□ 0.85
ECHDC2-220ENST00000498544 TRIM22Q8IYM9 498 aa20.38■□□□□ 0.85
ECHDC2-220ENST00000498544 PIBF1Q8WXW3 757 aa20.38■□□□□ 0.85
ECHDC2-220ENST00000498544 MMP19Q99542 508 aa20.38■□□□□ 0.85
ECHDC2-220ENST00000498544 MAF1Q9H063 256 aa20.38■□□□□ 0.85
ECHDC2-220ENST00000498544 SRRDQ9UH36 339 aa20.38■□□□□ 0.85
ECHDC2-220ENST00000498544 TRIM17Q9Y577 477 aa20.38■□□□□ 0.85
ECHDC2-220ENST00000498544 PCDHA1Q9Y5I3 950 aa20.38■□□□□ 0.85
ECHDC2-220ENST00000498544 HTTP42858 3142 aa20.38■□□□□ 0.85
ECHDC2-220ENST00000498544 hCG_1984214I3L0E3 225 aa20.37■□□□□ 0.85
ECHDC2-220ENST00000498544 CD2BP2O95400 341 aaKnown RBP20.37■□□□□ 0.85
ECHDC2-220ENST00000498544 MUM1L1Q5H9M0 696 aa20.37■□□□□ 0.85
ECHDC2-220ENST00000498544 ZNF713Q8N859 430 aaPredicted RBP20.37■□□□□ 0.85
ECHDC2-220ENST00000498544 NUDT12Q9BQG2 462 aa20.37■□□□□ 0.85
ECHDC2-220ENST00000498544 PCDH10Q9P2E7 1040 aa20.37■□□□□ 0.85
ECHDC2-220ENST00000498544 MRPL11Q9Y3B7 192 aaKnown RBP20.37■□□□□ 0.85
ECHDC2-220ENST00000498544 V9GY48 417 aaPredicted RBP20.37■□□□□ 0.85
ECHDC2-220ENST00000498544 LRRC37A2A6NM11 1700 aa20.36■□□□□ 0.85
ECHDC2-220ENST00000498544 STK36Q9NRP7 1315 aa20.36■□□□□ 0.85
ECHDC2-220ENST00000498544 PRPF3O43395 683 aaKnown RBP20.36■□□□□ 0.85
ECHDC2-220ENST00000498544 TAL1P17542 331 aaPredicted RBP20.36■□□□□ 0.85
ECHDC2-220ENST00000498544 ADORA2AP29274 412 aa20.36■□□□□ 0.85
ECHDC2-220ENST00000498544 AKAP17AQ02040 695 aaKnown RBP20.36■□□□□ 0.85
ECHDC2-220ENST00000498544 PRKCZQ05513 592 aa20.36■□□□□ 0.85
ECHDC2-220ENST00000498544 ANKRD35Q8N283 1001 aa20.36■□□□□ 0.85
ECHDC2-220ENST00000498544 NECAB1Q8N987 351 aa20.36■□□□□ 0.85
ECHDC2-220ENST00000498544 CLEC4DQ8WXI8 215 aa20.36■□□□□ 0.85
ECHDC2-220ENST00000498544 PHKBQ93100 1093 aa20.36■□□□□ 0.85
ECHDC2-220ENST00000498544 GJD2Q9UKL4 321 aa20.36■□□□□ 0.85
ECHDC2-220ENST00000498544 hCG_1642624A0A1W2PR95 340 aa20.35■□□□□ 0.85
ECHDC2-220ENST00000498544 NFIBO00712 420 aa20.35■□□□□ 0.85
ECHDC2-220ENST00000498544 RGS2P41220 211 aa20.35■□□□□ 0.85
ECHDC2-220ENST00000498544 FLT3LGP49771 235 aa20.35■□□□□ 0.85
ECHDC2-220ENST00000498544 SSRP1Q08945 709 aaKnown RBP20.35■□□□□ 0.85
ECHDC2-220ENST00000498544 MAP2K5Q13163 448 aa20.35■□□□□ 0.85
ECHDC2-220ENST00000498544 IRF5Q13568 498 aa20.35■□□□□ 0.85
ECHDC2-220ENST00000498544 PKN2Q16513 984 aaKnown RBP20.35■□□□□ 0.85
ECHDC2-220ENST00000498544 PFKFB3Q16875 520 aaPredicted RBP20.35■□□□□ 0.85
ECHDC2-220ENST00000498544 RGS22Q8NE09 1264 aa20.35■□□□□ 0.85
ECHDC2-220ENST00000498544 USP6NLQ92738 828 aa20.35■□□□□ 0.85
ECHDC2-220ENST00000498544 APBA2Q99767 749 aa20.35■□□□□ 0.85
ECHDC2-220ENST00000498544 SLC26A6Q9BXS9 759 aa20.35■□□□□ 0.85
ECHDC2-220ENST00000498544 A1CFQ9NQ94 594 aaKnown RBP20.35■□□□□ 0.85
ECHDC2-220ENST00000498544 HOXC6P09630 235 aa20.34■□□□□ 0.85
ECHDC2-220ENST00000498544 XRCC5P13010 732 aaKnown RBP20.34■□□□□ 0.85
ECHDC2-220ENST00000498544 SCG2P13521 617 aa20.34■□□□□ 0.85
ECHDC2-220ENST00000498544 PPP1R18Q6NYC8 613 aa20.34■□□□□ 0.85
ECHDC2-220ENST00000498544 HEATR3Q7Z4Q2 680 aa20.34■□□□□ 0.85
ECHDC2-220ENST00000498544 MCF2L2Q86YR7 1114 aa20.34■□□□□ 0.85
ECHDC2-220ENST00000498544 SLC5A4Q9NY91 659 aa20.34■□□□□ 0.85
ECHDC2-220ENST00000498544 GABRQQ9UN88 632 aa20.34■□□□□ 0.85
ECHDC2-220ENST00000498544 DNAJC25-GNG10A0A024R161 153 aa20.33■□□□□ 0.85
ECHDC2-220ENST00000498544 DEXIO95424 95 aa20.33■□□□□ 0.85
ECHDC2-220ENST00000498544 GHRHRQ02643 423 aa20.33■□□□□ 0.85
ECHDC2-220ENST00000498544 ST3GAL1Q11201 340 aa20.33■□□□□ 0.85
ECHDC2-220ENST00000498544 WWC2Q6AWC2 1192 aa20.33■□□□□ 0.85
ECHDC2-220ENST00000498544 NSMFQ6X4W1 530 aa20.33■□□□□ 0.85
ECHDC2-220ENST00000498544 SAMD3Q8N6K7 520 aa20.33■□□□□ 0.85
ECHDC2-220ENST00000498544 DDX11Q96FC9 970 aa20.33■□□□□ 0.85
ECHDC2-220ENST00000498544 LLPHQ9BRT6 129 aaKnown RBP20.33■□□□□ 0.85
ECHDC2-220ENST00000498544 BARHL2Q9NY43 387 aa20.33■□□□□ 0.85
ECHDC2-220ENST00000498544 CYP39A1Q9NYL5 469 aa20.33■□□□□ 0.85
ECHDC2-220ENST00000498544 PTPN22Q9Y2R2 807 aa20.33■□□□□ 0.85
ECHDC2-220ENST00000498544 OPLAHO14841 1288 aa20.32■□□□□ 0.84
ECHDC2-220ENST00000498544 CTDNEP1O95476 244 aa20.32■□□□□ 0.84
ECHDC2-220ENST00000498544 PKN1Q16512 942 aa20.32■□□□□ 0.84
ECHDC2-220ENST00000498544 RNF207Q6ZRF8 634 aa20.32■□□□□ 0.84
ECHDC2-220ENST00000498544 DPP9Q86TI2 863 aa20.32■□□□□ 0.84
ECHDC2-220ENST00000498544 TEX2Q8IWB9 1127 aa20.32■□□□□ 0.84
ECHDC2-220ENST00000498544 CCDC83Q8IWF9 413 aa20.32■□□□□ 0.84
ECHDC2-220ENST00000498544 NSUN7Q8NE18 718 aaKnown RBP20.32■□□□□ 0.84
ECHDC2-220ENST00000498544 RAET1EQ8TD07 263 aa20.32■□□□□ 0.84
ECHDC2-220ENST00000498544 GPKOWQ92917 476 aaPredicted RBP eCLIP20.32■□□□□ 0.84
ECHDC2-220ENST00000498544 TMX3Q96JJ7 454 aa20.32■□□□□ 0.84
ECHDC2-220ENST00000498544 MAP3K20Q9NYL2 800 aaKnown RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms