RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 KATNBL1Q9H079 304 aa13.94□□□□□ -0.18
CDK9-205ENST00000498339 EPHX3Q9H6B9 360 aa13.94□□□□□ -0.18
CDK9-205ENST00000498339 NYAP2Q9P242 653 aa13.94□□□□□ -0.18
CDK9-205ENST00000498339 LCTP09848 1927 aa13.94□□□□□ -0.18
CDK9-205ENST00000498339 ASB14A6NK59 587 aa13.93□□□□□ -0.18
CDK9-205ENST00000498339 PFKMP08237 780 aa13.93□□□□□ -0.18
CDK9-205ENST00000498339 ACTN1P12814 892 aa13.93□□□□□ -0.18
CDK9-205ENST00000498339 PTGS1P23219 599 aa13.93□□□□□ -0.18
CDK9-205ENST00000498339 OAZ1P54368 228 aa13.93□□□□□ -0.18
CDK9-205ENST00000498339 ZSCAN25Q6NSZ9 544 aa13.93□□□□□ -0.18
CDK9-205ENST00000498339 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.93□□□□□ -0.18
CDK9-205ENST00000498339 FBXO16Q8IX29 292 aaPredicted RBP13.93□□□□□ -0.18
CDK9-205ENST00000498339 ARNTL2Q8WYA1 636 aa13.93□□□□□ -0.18
CDK9-205ENST00000498339 CHMP4CQ96CF2 233 aa13.93□□□□□ -0.18
CDK9-205ENST00000498339 SEZ6LQ9BYH1 1024 aa13.93□□□□□ -0.18
CDK9-205ENST00000498339 RNF146Q9NTX7 359 aa13.93□□□□□ -0.18
CDK9-205ENST00000498339 GNEQ9Y223 722 aaKnown RBP13.93□□□□□ -0.18
CDK9-205ENST00000498339 MTCH2Q9Y6C9 303 aa13.93□□□□□ -0.18
CDK9-205ENST00000498339 FAM86C2PA6NEL3 165 aa13.92□□□□□ -0.18
CDK9-205ENST00000498339 SMPD1P17405 629 aa13.92□□□□□ -0.18
CDK9-205ENST00000498339 NKX3-2P78367 333 aa13.92□□□□□ -0.18
CDK9-205ENST00000498339 TTLL4Q14679 1199 aa13.92□□□□□ -0.18
CDK9-205ENST00000498339 UBE3CQ15386 1083 aa13.92□□□□□ -0.18
CDK9-205ENST00000498339 KRT40Q6A162 431 aa13.92□□□□□ -0.18
CDK9-205ENST00000498339 HAUS7Q99871 368 aa13.92□□□□□ -0.18
CDK9-205ENST00000498339 PUS7LQ9H0K6 701 aaKnown RBP13.92□□□□□ -0.18
CDK9-205ENST00000498339 A1CFQ9NQ94 594 aaKnown RBP13.92□□□□□ -0.18
CDK9-205ENST00000498339 COG5Q9UP83 839 aa13.92□□□□□ -0.18
CDK9-205ENST00000498339 PTPRSQ13332 1948 aa13.92□□□□□ -0.18
CDK9-205ENST00000498339 GRIN2DO15399 1336 aa13.91□□□□□ -0.18
CDK9-205ENST00000498339 HMMRO75330 724 aa13.91□□□□□ -0.18
CDK9-205ENST00000498339 CYP2C9P11712 490 aa13.91□□□□□ -0.18
CDK9-205ENST00000498339 BMP3P12645 472 aa13.91□□□□□ -0.18
CDK9-205ENST00000498339 ALAS1P13196 640 aa13.91□□□□□ -0.18
CDK9-205ENST00000498339 TDO2P48775 406 aa13.91□□□□□ -0.18
CDK9-205ENST00000498339 STAT2P52630 851 aa13.91□□□□□ -0.18
CDK9-205ENST00000498339 FAM47CQ5HY64 1035 aa13.91□□□□□ -0.18
CDK9-205ENST00000498339 ZNF444Q8N0Y2 327 aaPredicted RBP13.91□□□□□ -0.18
CDK9-205ENST00000498339 FAM133AQ8N9E0 248 aa13.91□□□□□ -0.18
CDK9-205ENST00000498339 CEP95Q96GE4 821 aa13.91□□□□□ -0.18
CDK9-205ENST00000498339 ALDH8A1Q9H2A2 487 aaPredicted RBP13.91□□□□□ -0.18
CDK9-205ENST00000498339 ZNF287Q9HBT7 754 aa13.91□□□□□ -0.18
CDK9-205ENST00000498339 PDGFCQ9NRA1 345 aa13.91□□□□□ -0.18
CDK9-205ENST00000498339 TRMT13Q9NUP7 481 aaKnown RBP13.91□□□□□ -0.18
CDK9-205ENST00000498339 DDX49Q9Y6V7 483 aaKnown RBP13.91□□□□□ -0.18
CDK9-205ENST00000498339 TRIP12Q14669 1992 aaPredicted RBP13.91□□□□□ -0.18
CDK9-205ENST00000498339 TNKSO95271 1327 aa13.9□□□□□ -0.18
CDK9-205ENST00000498339 SOWAHBA6NEL2 793 aa13.9□□□□□ -0.18
CDK9-205ENST00000498339 EPOPA6NHQ4 379 aa13.9□□□□□ -0.18
CDK9-205ENST00000498339 KIF28PB7ZC32 967 aa13.9□□□□□ -0.18
CDK9-205ENST00000498339 TMEM232C9JQI7 657 aa13.9□□□□□ -0.18
CDK9-205ENST00000498339 PRDM1O75626 825 aa13.9□□□□□ -0.18
CDK9-205ENST00000498339 TTLL1O95922 423 aa13.9□□□□□ -0.18
CDK9-205ENST00000498339 SUPT20HL2P0C7V6 817 aa13.9□□□□□ -0.18
CDK9-205ENST00000498339 ATP5JP18859 108 aa13.9□□□□□ -0.18
CDK9-205ENST00000498339 SLFN13Q68D06 897 aa13.9□□□□□ -0.18
CDK9-205ENST00000498339 PANK1Q8TE04 598 aa13.9□□□□□ -0.18
CDK9-205ENST00000498339 HLA-CQ95604 372 aa13.9□□□□□ -0.18
CDK9-205ENST00000498339 AGBL1Q96MI9 1066 aa13.9□□□□□ -0.18
CDK9-205ENST00000498339 TRERF1Q96PN7 1200 aa13.9□□□□□ -0.18
CDK9-205ENST00000498339 SLC9A7Q96T83 725 aa13.9□□□□□ -0.18
CDK9-205ENST00000498339 FTOQ9C0B1 505 aaKnown RBP eCLIP13.9□□□□□ -0.18
CDK9-205ENST00000498339 ARIH1Q9Y4X5 557 aaPredicted RBP13.9□□□□□ -0.18
CDK9-205ENST00000498339 MYL3P08590 195 aa13.89□□□□□ -0.19
CDK9-205ENST00000498339 FDX1P10109 184 aa13.89□□□□□ -0.19
CDK9-205ENST00000498339 SBK1Q52WX2 424 aa13.89□□□□□ -0.19
CDK9-205ENST00000498339 IQSEC1Q6DN90 963 aa13.89□□□□□ -0.19
CDK9-205ENST00000498339 KIAA1211Q6ZU35 1233 aa13.89□□□□□ -0.19
CDK9-205ENST00000498339 GMCL1P1Q8NEA9 526 aa13.89□□□□□ -0.19
CDK9-205ENST00000498339 GPHNQ9NQX3 736 aaPredicted RBP13.89□□□□□ -0.19
CDK9-205ENST00000498339 IGKV6D-41A0A0C4DH26 115 aa13.88□□□□□ -0.19
CDK9-205ENST00000498339 RAB11FIP3O75154 756 aa13.88□□□□□ -0.19
CDK9-205ENST00000498339 APPP05067 770 aa13.88□□□□□ -0.19
CDK9-205ENST00000498339 TSPY3P0CV98 308 aa13.88□□□□□ -0.19
CDK9-205ENST00000498339 TSPY8P0CW00 308 aa13.88□□□□□ -0.19
CDK9-205ENST00000498339 SLC1A4P43007 532 aa13.88□□□□□ -0.19
CDK9-205ENST00000498339 TKFCQ3LXA3 575 aa13.88□□□□□ -0.19
CDK9-205ENST00000498339 NSMFQ6X4W1 530 aa13.88□□□□□ -0.19
CDK9-205ENST00000498339 FAM160B2Q86V87 743 aa13.88□□□□□ -0.19
CDK9-205ENST00000498339 RPAP2Q8IXW5 612 aaPredicted RBP13.88□□□□□ -0.19
CDK9-205ENST00000498339 RETREG2Q8NC44 543 aa13.88□□□□□ -0.19
CDK9-205ENST00000498339 CHURC1Q8WUH1 139 aa13.88□□□□□ -0.19
CDK9-205ENST00000498339 STRBPQ96SI9 672 aaKnown RBP13.88□□□□□ -0.19
CDK9-205ENST00000498339 VTA1Q9NP79 307 aa13.88□□□□□ -0.19
CDK9-205ENST00000498339 POLR3EQ9NVU0 708 aa13.88□□□□□ -0.19
CDK9-205ENST00000498339 MTMR4Q9NYA4 1195 aa13.88□□□□□ -0.19
CDK9-205ENST00000498339 NOD1Q9Y239 953 aa13.88□□□□□ -0.19
CDK9-205ENST00000498339 SCN10AQ9Y5Y9 1956 aa13.88□□□□□ -0.19
CDK9-205ENST00000498339 TET1Q8NFU7 2136 aa13.88□□□□□ -0.19
CDK9-205ENST00000498339 SIP14410 1827 aa13.87□□□□□ -0.19
CDK9-205ENST00000498339 GSG1L2A8MUP6 293 aa13.87□□□□□ -0.19
CDK9-205ENST00000498339 TLL1O43897 1013 aa13.87□□□□□ -0.19
CDK9-205ENST00000498339 POU3F3P20264 500 aaPredicted RBP13.87□□□□□ -0.19
CDK9-205ENST00000498339 RFC2P35250 354 aa13.87□□□□□ -0.19
CDK9-205ENST00000498339 KCNJ6P48051 423 aa13.87□□□□□ -0.19
CDK9-205ENST00000498339 CPT1AP50416 773 aa13.87□□□□□ -0.19
CDK9-205ENST00000498339 CHMP4BP1P59074 171 aa13.87□□□□□ -0.19
CDK9-205ENST00000498339 SNAP25P60880 206 aa13.87□□□□□ -0.19
CDK9-205ENST00000498339 TAP1Q03518 808 aa13.87□□□□□ -0.19
CDK9-205ENST00000498339 GRB10Q13322 594 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms