RNA–Protein interactions for RNA: ENST00000498091.1

RTN4IP1-203, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2

Gene RTN4IP1, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-203ENST00000498091 ZNF496Q96IT1 587 aaPredicted RBP4.56□□□□□ -1.68
RTN4IP1-203ENST00000498091 GSX2Q9BZM3 304 aa4.56□□□□□ -1.68
RTN4IP1-203ENST00000498091 LIN7BQ9HAP6 207 aa4.56□□□□□ -1.68
RTN4IP1-203ENST00000498091 C11orf16Q9NQ32 467 aa4.56□□□□□ -1.68
RTN4IP1-203ENST00000498091 TNNQ9UQP3 1299 aa4.56□□□□□ -1.68
RTN4IP1-203ENST00000498091 TLR6Q9Y2C9 796 aa4.56□□□□□ -1.68
RTN4IP1-203ENST00000498091 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.56□□□□□ -1.68
RTN4IP1-203ENST00000498091 COL5A3P25940 1745 aaPredicted RBP4.55□□□□□ -1.68
RTN4IP1-203ENST00000498091 UTYO14607 1347 aa4.55□□□□□ -1.68
RTN4IP1-203ENST00000498091 CCDC85CA6NKD9 419 aa4.55□□□□□ -1.68
RTN4IP1-203ENST00000498091 KCNQ3O43525 872 aa4.55□□□□□ -1.68
RTN4IP1-203ENST00000498091 SASH3O75995 380 aa4.55□□□□□ -1.68
RTN4IP1-203ENST00000498091 GHRHP01286 108 aa4.55□□□□□ -1.68
RTN4IP1-203ENST00000498091 PF4P02776 101 aa4.55□□□□□ -1.68
RTN4IP1-203ENST00000498091 GNAI2P04899 355 aa4.55□□□□□ -1.68
RTN4IP1-203ENST00000498091 HSPA1LP34931 641 aa4.55□□□□□ -1.68
RTN4IP1-203ENST00000498091 CHMP4BP1P59074 171 aa4.55□□□□□ -1.68
RTN4IP1-203ENST00000498091 NUCB1Q02818 461 aa4.55□□□□□ -1.68
RTN4IP1-203ENST00000498091 NFIAQ12857 509 aa4.55□□□□□ -1.68
RTN4IP1-203ENST00000498091 SNAP47Q5SQN1 464 aa4.55□□□□□ -1.68
RTN4IP1-203ENST00000498091 PRPF40BQ6NWY9 871 aaKnown RBP4.55□□□□□ -1.68
RTN4IP1-203ENST00000498091 KSR2Q6VAB6 950 aa4.55□□□□□ -1.68
RTN4IP1-203ENST00000498091 HFE2Q6ZVN8 426 aa4.55□□□□□ -1.68
RTN4IP1-203ENST00000498091 G2E3Q7L622 706 aa4.55□□□□□ -1.68
RTN4IP1-203ENST00000498091 LRP10Q7Z4F1 713 aa4.55□□□□□ -1.68
RTN4IP1-203ENST00000498091 FILIP1Q7Z7B0 1213 aa4.55□□□□□ -1.68
RTN4IP1-203ENST00000498091 MAP4K3Q8IVH8 894 aa4.55□□□□□ -1.68
RTN4IP1-203ENST00000498091 ANKRD44Q8N8A2 993 aa4.55□□□□□ -1.68
RTN4IP1-203ENST00000498091 PHC3Q8NDX5 983 aa4.55□□□□□ -1.68
RTN4IP1-203ENST00000498091 LINS1Q8NG48 757 aa4.55□□□□□ -1.68
RTN4IP1-203ENST00000498091 GIMAP7Q8NHV1 300 aa4.55□□□□□ -1.68
RTN4IP1-203ENST00000498091 DDX54Q8TDD1 881 aaKnown RBP4.55□□□□□ -1.68
RTN4IP1-203ENST00000498091 DNAAF4Q8WXU2 420 aa4.55□□□□□ -1.68
RTN4IP1-203ENST00000498091 NKD1Q969G9 470 aa4.55□□□□□ -1.68
RTN4IP1-203ENST00000498091 UTP4Q969X6 686 aaKnown RBP4.55□□□□□ -1.68
RTN4IP1-203ENST00000498091 RHOVQ96L33 236 aa4.55□□□□□ -1.68
RTN4IP1-203ENST00000498091 RNPC3Q96LT9 517 aaKnown RBP4.55□□□□□ -1.68
RTN4IP1-203ENST00000498091 DEPDC7Q96QD5 511 aa4.55□□□□□ -1.68
RTN4IP1-203ENST00000498091 LPIN3Q9BQK8 851 aa4.55□□□□□ -1.68
RTN4IP1-203ENST00000498091 SRRTQ9BXP5 876 aaKnown RBP4.55□□□□□ -1.68
RTN4IP1-203ENST00000498091 SLKQ9H2G2 1235 aaPredicted RBP4.55□□□□□ -1.68
RTN4IP1-203ENST00000498091 ABCB6Q9NP58 842 aa4.55□□□□□ -1.68
RTN4IP1-203ENST00000498091 SNTG2Q9NY99 539 aa4.55□□□□□ -1.68
RTN4IP1-203ENST00000498091 UBP1Q9NZI7 540 aa4.55□□□□□ -1.68
RTN4IP1-203ENST00000498091 AFDNP55196 1824 aaKnown RBP4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 KAT6BQ8WYB5 2073 aa4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 PI4KAP2A4QPH2 592 aa4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 FAM221BA6H8Z2 402 aa4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 FAM177BA6PVY3 158 aa4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 DLL1O00548 723 aa4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 SART1O43290 800 aaKnown RBP4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 GREM1O60565 184 aa4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 MED26O95402 600 aa4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 STARD3NLO95772 234 aa4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 IGHDP01880 384 aa4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 CELA3AP09093 270 aa4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 UBTFL1P0CB47 393 aaPredicted RBP4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 EIF2S2P20042 333 aaKnown RBP4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 GARTP22102 1010 aa4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 HMGB2P26583 209 aaKnown RBP4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 TARSP26639 723 aaKnown RBP4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 LIG3P49916 1009 aa4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 SETQ01105 290 aaPredicted RBP4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 APOBRQ0VD83 1088 aa4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 NEXNQ0ZGT2 675 aa4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 SLC39A6Q13433 755 aa4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 MTX1Q13505 466 aa4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 CAMK2GQ13555 558 aaPredicted RBP4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 RASA3Q14644 834 aa4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 PROSER3Q2NL68 480 aa4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 BEND3Q5T5X7 828 aa4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 PCNX4Q63HM2 1172 aa4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 CEP85Q6P2H3 762 aa4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 SLC4A10Q6U841 1118 aa4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 SIRT2Q8IXJ6 389 aa4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 AGGF1Q8N302 714 aaeCLIP4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 TMEM130Q8N3G9 435 aa4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 IL22RA1Q8N6P7 574 aa4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 PI4KAP1Q8N8J0 262 aa4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 GOLM1Q8NBJ4 401 aa4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 OR13H1Q8NG92 308 aa4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 PIGBQ92521 554 aa4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 SMARCC1Q92922 1105 aaPredicted RBP4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 ASIC4Q96FT7 647 aa4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 MEIS3Q99687 375 aa4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 KRTAP17-1Q9BYP8 105 aa4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 USP44Q9H0E7 712 aa4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 KCNF1Q9H3M0 494 aa4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 ZFYVE1Q9HBF4 777 aa4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 KCNQ5Q9NR82 932 aa4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 PRKAG3Q9UGI9 489 aa4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 SALL4Q9UJQ4 1053 aa4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 ANKRD36CQ5JPF3 1778 aa4.54□□□□□ -1.68
RTN4IP1-203ENST00000498091 SBF2Q86WG5 1849 aa4.53□□□□□ -1.68
RTN4IP1-203ENST00000498091 AFF2P51816 1311 aa4.53□□□□□ -1.68
RTN4IP1-203ENST00000498091 LY75O60449 1722 aa4.53□□□□□ -1.68
RTN4IP1-203ENST00000498091 SMAD7O15105 426 aaKnown RBP4.53□□□□□ -1.68
RTN4IP1-203ENST00000498091 MMP20O60882 483 aa4.53□□□□□ -1.68
RTN4IP1-203ENST00000498091 DEAF1O75398 565 aaPredicted RBP4.53□□□□□ -1.68
RTN4IP1-203ENST00000498091 JAG1P78504 1218 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms