RNA–Protein interactions for RNA: ENST00000497527.1

HPS1-213, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-213ENST00000497527 ZBED4O75132 1171 aa13.87□□□□□ -0.19
HPS1-213ENST00000497527 FLOT1O75955 427 aa13.87□□□□□ -0.19
HPS1-213ENST00000497527 MARCKSP29966 332 aaPredicted RBP13.87□□□□□ -0.19
HPS1-213ENST00000497527 CLK2P49760 499 aaKnown RBP13.87□□□□□ -0.19
HPS1-213ENST00000497527 ATP2C1P98194 919 aaPredicted RBP13.87□□□□□ -0.19
HPS1-213ENST00000497527 PRKG1Q13976 671 aa13.87□□□□□ -0.19
HPS1-213ENST00000497527 INF2Q27J81 1249 aa13.87□□□□□ -0.19
HPS1-213ENST00000497527 TPRNQ4KMQ1 711 aa13.87□□□□□ -0.19
HPS1-213ENST00000497527 AXDND1Q5T1B0 1012 aaPredicted RBP13.87□□□□□ -0.19
HPS1-213ENST00000497527 JAKMIP3Q5VZ66 844 aa13.87□□□□□ -0.19
HPS1-213ENST00000497527 LDHDQ86WU2 507 aa13.87□□□□□ -0.19
HPS1-213ENST00000497527 ERO1BQ86YB8 467 aa13.87□□□□□ -0.19
HPS1-213ENST00000497527 SAMD3Q8N6K7 520 aa13.87□□□□□ -0.19
HPS1-213ENST00000497527 CCDC34Q96HJ3 373 aa13.87□□□□□ -0.19
HPS1-213ENST00000497527 RPAP3Q9H6T3 665 aaPredicted RBP13.87□□□□□ -0.19
HPS1-213ENST00000497527 EHMT1Q9H9B1 1298 aa13.87□□□□□ -0.19
HPS1-213ENST00000497527 BIN2Q9UBW5 565 aaPredicted RBP13.87□□□□□ -0.19
HPS1-213ENST00000497527 PPP1R9AQ9ULJ8 1098 aa13.87□□□□□ -0.19
HPS1-213ENST00000497527 AFG3L2Q9Y4W6 797 aa13.87□□□□□ -0.19
HPS1-213ENST00000497527 COL11A1P12107 1806 aaPredicted RBP13.87□□□□□ -0.19
HPS1-213ENST00000497527 RLFQ13129 1914 aa13.86□□□□□ -0.19
HPS1-213ENST00000497527 FAM237AA0A1B0GTK4 181 aa13.86□□□□□ -0.19
HPS1-213ENST00000497527 SPDYE3A6NKU9 549 aa13.86□□□□□ -0.19
HPS1-213ENST00000497527 USP17L15C9J2P7 530 aa13.86□□□□□ -0.19
HPS1-213ENST00000497527 USP17L13C9JLJ4 530 aa13.86□□□□□ -0.19
HPS1-213ENST00000497527 USP17L11C9JVI0 530 aa13.86□□□□□ -0.19
HPS1-213ENST00000497527 USP17L18D6R9N7 530 aa13.86□□□□□ -0.19
HPS1-213ENST00000497527 USP17L22D6RA61 530 aa13.86□□□□□ -0.19
HPS1-213ENST00000497527 USP17L17D6RBQ6 530 aa13.86□□□□□ -0.19
HPS1-213ENST00000497527 USP17L19D6RCP7 530 aa13.86□□□□□ -0.19
HPS1-213ENST00000497527 USP17L20D6RJB6 530 aa13.86□□□□□ -0.19
HPS1-213ENST00000497527 PIK3CDO00329 1044 aa13.86□□□□□ -0.19
HPS1-213ENST00000497527 ICAM1P05362 532 aa13.86□□□□□ -0.19
HPS1-213ENST00000497527 GCFC2P16383 781 aaKnown RBP13.86□□□□□ -0.19
HPS1-213ENST00000497527 LIG1P18858 919 aa13.86□□□□□ -0.19
HPS1-213ENST00000497527 PRPHP41219 470 aa13.86□□□□□ -0.19
HPS1-213ENST00000497527 FKBP1BP68106 108 aa13.86□□□□□ -0.19
HPS1-213ENST00000497527 USP17L24Q0WX57 530 aa13.86□□□□□ -0.19
HPS1-213ENST00000497527 ZNF174Q15697 407 aa13.86□□□□□ -0.19
HPS1-213ENST00000497527 USH1GQ495M9 461 aa13.86□□□□□ -0.19
HPS1-213ENST00000497527 RESP18Q5W5W9 173 aa13.86□□□□□ -0.19
HPS1-213ENST00000497527 TBCKQ8TEA7 893 aa13.86□□□□□ -0.19
HPS1-213ENST00000497527 PYM1Q9BRP8 204 aaKnown RBP13.86□□□□□ -0.19
HPS1-213ENST00000497527 TNMDQ9H2S6 317 aa13.86□□□□□ -0.19
HPS1-213ENST00000497527 CLSTN2Q9H4D0 955 aa13.86□□□□□ -0.19
HPS1-213ENST00000497527 DACT1Q9NYF0 836 aa13.86□□□□□ -0.19
HPS1-213ENST00000497527 FBXO2Q9UK22 296 aaPredicted RBP13.86□□□□□ -0.19
HPS1-213ENST00000497527 TRPM7Q96QT4 1865 aa13.86□□□□□ -0.19
HPS1-213ENST00000497527 SMCHD1A6NHR9 2005 aa13.85□□□□□ -0.19
HPS1-213ENST00000497527 SPDYE5A6NIY4 337 aa13.85□□□□□ -0.19
HPS1-213ENST00000497527 CXCL11O14625 94 aa13.85□□□□□ -0.19
HPS1-213ENST00000497527 MCM7P33993 719 aa13.85□□□□□ -0.19
HPS1-213ENST00000497527 OAZ1P54368 228 aa13.85□□□□□ -0.19
HPS1-213ENST00000497527 HMGCS2P54868 508 aa13.85□□□□□ -0.19
HPS1-213ENST00000497527 PTGDRQ13258 359 aa13.85□□□□□ -0.19
HPS1-213ENST00000497527 PPIL2Q13356 520 aa13.85□□□□□ -0.19
HPS1-213ENST00000497527 CCDC174Q6PII3 467 aa13.85□□□□□ -0.19
HPS1-213ENST00000497527 MOXD1Q6UVY6 613 aa13.85□□□□□ -0.19
HPS1-213ENST00000497527 MCF2L2Q86YR7 1114 aa13.85□□□□□ -0.19
HPS1-213ENST00000497527 TIGD1Q96MW7 591 aa13.85□□□□□ -0.19
HPS1-213ENST00000497527 MAF1Q9H063 256 aa13.85□□□□□ -0.19
HPS1-213ENST00000497527 SLC38A10Q9HBR0 1119 aa13.85□□□□□ -0.19
HPS1-213ENST00000497527 MAP3K20Q9NYL2 800 aaKnown RBP13.85□□□□□ -0.19
HPS1-213ENST00000497527 CCPG1Q9ULG6 757 aa13.85□□□□□ -0.19
HPS1-213ENST00000497527 FZD1Q9UP38 647 aa13.85□□□□□ -0.19
HPS1-213ENST00000497527 PFKFB1P16118 471 aa13.84□□□□□ -0.19
HPS1-213ENST00000497527 TXLNAP40222 546 aa13.84□□□□□ -0.19
HPS1-213ENST00000497527 USP11P51784 963 aa13.84□□□□□ -0.19
HPS1-213ENST00000497527 COG2Q14746 738 aa13.84□□□□□ -0.19
HPS1-213ENST00000497527 LETM2Q2VYF4 491 aa13.84□□□□□ -0.19
HPS1-213ENST00000497527 LRSAM1Q6UWE0 723 aa13.84□□□□□ -0.19
HPS1-213ENST00000497527 PROCA1Q8NCQ7 364 aaPredicted RBP13.84□□□□□ -0.19
HPS1-213ENST00000497527 ENGASEQ8NFI3 743 aa13.84□□□□□ -0.19
HPS1-213ENST00000497527 ANO3Q9BYT9 981 aa13.84□□□□□ -0.19
HPS1-213ENST00000497527 ELP3Q9H9T3 547 aa13.84□□□□□ -0.19
HPS1-213ENST00000497527 FBXO28Q9NVF7 368 aa13.84□□□□□ -0.19
HPS1-213ENST00000497527 TMEM260Q9NX78 707 aa13.84□□□□□ -0.19
HPS1-213ENST00000497527 HOXC10Q9NYD6 342 aa13.84□□□□□ -0.19
HPS1-213ENST00000497527 HOOK1Q9UJC3 728 aaKnown RBP13.84□□□□□ -0.19
HPS1-213ENST00000497527 RABGAP1Q9Y3P9 1069 aa13.84□□□□□ -0.19
HPS1-213ENST00000497527 A0A1B0GVL5 298 aa13.83□□□□□ -0.2
HPS1-213ENST00000497527 SYCE3A1L190 88 aa13.83□□□□□ -0.2
HPS1-213ENST00000497527 GOLGA6L3A6NEY3 463 aa13.83□□□□□ -0.2
HPS1-213ENST00000497527 GCOM1H8Y6P7 765 aaPredicted RBP13.83□□□□□ -0.2
HPS1-213ENST00000497527 NEMFO60524 1076 aa13.83□□□□□ -0.2
HPS1-213ENST00000497527 CCNT1O60563 726 aaKnown RBP13.83□□□□□ -0.2
HPS1-213ENST00000497527 NR1I2O75469 434 aa13.83□□□□□ -0.2
HPS1-213ENST00000497527 OR52Z1P0C646 297 aa13.83□□□□□ -0.2
HPS1-213ENST00000497527 POLR2MP0CAP2 368 aa13.83□□□□□ -0.2
HPS1-213ENST00000497527 DSG3P32926 999 aa13.83□□□□□ -0.2
HPS1-213ENST00000497527 LONP1P36776 959 aaKnown RBP13.83□□□□□ -0.2
HPS1-213ENST00000497527 SYKP43405 635 aa13.83□□□□□ -0.2
HPS1-213ENST00000497527 SNAP25P60880 206 aa13.83□□□□□ -0.2
HPS1-213ENST00000497527 PABPC4Q13310 644 aaKnown RBP eCLIP13.83□□□□□ -0.2
HPS1-213ENST00000497527 UBE2SQ16763 222 aa13.83□□□□□ -0.2
HPS1-213ENST00000497527 NOM1Q5C9Z4 860 aaKnown RBP13.83□□□□□ -0.2
HPS1-213ENST00000497527 L1TD1Q5T7N2 865 aaKnown RBP13.83□□□□□ -0.2
HPS1-213ENST00000497527 PPP4R3AQ6IN85 833 aa13.83□□□□□ -0.2
HPS1-213ENST00000497527 SHC4Q6S5L8 630 aa13.83□□□□□ -0.2
HPS1-213ENST00000497527 SAMD1Q6SPF0 538 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms