RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 MYH6P13533 1939 aa22.74■■□□□ 1.23
SCAMP3-209ENST00000497470 PIK3CDO00329 1044 aa22.73■■□□□ 1.23
SCAMP3-209ENST00000497470 STRNO43815 780 aa22.73■■□□□ 1.23
SCAMP3-209ENST00000497470 CRHR2Q13324 411 aa22.73■■□□□ 1.23
SCAMP3-209ENST00000497470 SNRNP48Q6IEG0 339 aaKnown RBP22.73■■□□□ 1.23
SCAMP3-209ENST00000497470 BICD2Q8TD16 824 aa22.73■■□□□ 1.23
SCAMP3-209ENST00000497470 RAVER2Q9HCJ3 691 aaKnown RBP22.73■■□□□ 1.23
SCAMP3-209ENST00000497470 TXNRD2Q9NNW7 524 aa22.73■■□□□ 1.23
SCAMP3-209ENST00000497470 RNF186Q9NXI6 227 aa22.73■■□□□ 1.23
SCAMP3-209ENST00000497470 MAPK4P31152 587 aa22.72■■□□□ 1.23
SCAMP3-209ENST00000497470 MRPL12P52815 198 aaKnown RBP22.72■■□□□ 1.23
SCAMP3-209ENST00000497470 TRIM29Q14134 588 aa22.72■■□□□ 1.23
SCAMP3-209ENST00000497470 DDX11Q96FC9 970 aa22.72■■□□□ 1.23
SCAMP3-209ENST00000497470 PHF20Q9BVI0 1012 aa22.72■■□□□ 1.23
SCAMP3-209ENST00000497470 MOV10L1Q9BXT6 1211 aaKnown RBP22.72■■□□□ 1.23
SCAMP3-209ENST00000497470 CCDC174Q6PII3 467 aa22.71■■□□□ 1.23
SCAMP3-209ENST00000497470 HEATR3Q7Z4Q2 680 aa22.71■■□□□ 1.23
SCAMP3-209ENST00000497470 CPXCR1Q8N123 301 aa22.71■■□□□ 1.23
SCAMP3-209ENST00000497470 JMYQ8N9B5 988 aa22.71■■□□□ 1.23
SCAMP3-209ENST00000497470 C8orf76Q96K31 380 aa22.71■■□□□ 1.23
SCAMP3-209ENST00000497470 AGBL1Q96MI9 1066 aa22.71■■□□□ 1.23
SCAMP3-209ENST00000497470 ACAD9Q9H845 621 aa22.71■■□□□ 1.23
SCAMP3-209ENST00000497470 C6orf50Q9HD87 102 aa22.71■■□□□ 1.23
SCAMP3-209ENST00000497470 RIC8AQ9NPQ8 531 aa22.71■■□□□ 1.23
SCAMP3-209ENST00000497470 COL11A1P12107 1806 aaPredicted RBP22.71■■□□□ 1.23
SCAMP3-209ENST00000497470 LOC102724159A0A0B4J2E5 919 aa22.7■■□□□ 1.22
SCAMP3-209ENST00000497470 NAPAP54920 295 aa22.7■■□□□ 1.22
SCAMP3-209ENST00000497470 PWP2Q15269 919 aaKnown RBP22.7■■□□□ 1.22
SCAMP3-209ENST00000497470 Q3C1V9 767 aa22.7■■□□□ 1.22
SCAMP3-209ENST00000497470 LARP1BQ659C4 914 aaKnown RBP22.7■■□□□ 1.22
SCAMP3-209ENST00000497470 ANKRD13CQ8N6S4 541 aa22.7■■□□□ 1.22
SCAMP3-209ENST00000497470 CLEC4DQ8WXI8 215 aa22.7■■□□□ 1.22
SCAMP3-209ENST00000497470 TRERF1Q96PN7 1200 aa22.7■■□□□ 1.22
SCAMP3-209ENST00000497470 PFASO15067 1338 aa22.69■■□□□ 1.22
SCAMP3-209ENST00000497470 MMP1P03956 469 aa22.69■■□□□ 1.22
SCAMP3-209ENST00000497470 HSD17B4P51659 736 aa22.69■■□□□ 1.22
SCAMP3-209ENST00000497470 CUL5Q93034 780 aa22.69■■□□□ 1.22
SCAMP3-209ENST00000497470 COA7Q96BR5 231 aa22.69■■□□□ 1.22
SCAMP3-209ENST00000497470 PAGR1Q9BTK6 254 aa22.69■■□□□ 1.22
SCAMP3-209ENST00000497470 PSTPIP2Q9H939 334 aa22.69■■□□□ 1.22
SCAMP3-209ENST00000497470 BRMS1Q9HCU9 246 aa22.69■■□□□ 1.22
SCAMP3-209ENST00000497470 RNF146Q9NTX7 359 aa22.69■■□□□ 1.22
SCAMP3-209ENST00000497470 WBP1LQ9NX94 342 aa22.69■■□□□ 1.22
SCAMP3-209ENST00000497470 CIZ1Q9ULV3 898 aaPredicted RBP22.69■■□□□ 1.22
SCAMP3-209ENST00000497470 hCG_1642624A0A1W2PR95 340 aa22.68■■□□□ 1.22
SCAMP3-209ENST00000497470 SMCO2A6NFE2 343 aa22.68■■□□□ 1.22
SCAMP3-209ENST00000497470 FOSP01100 380 aaPredicted RBP22.68■■□□□ 1.22
SCAMP3-209ENST00000497470 ALAS1P13196 640 aa22.68■■□□□ 1.22
SCAMP3-209ENST00000497470 DDIT3P35638 169 aa22.68■■□□□ 1.22
SCAMP3-209ENST00000497470 TYW1BQ6NUM6 668 aa22.68■■□□□ 1.22
SCAMP3-209ENST00000497470 BEGAINQ9BUH8 593 aa22.68■■□□□ 1.22
SCAMP3-209ENST00000497470 PCDHA4Q9UN74 947 aa22.68■■□□□ 1.22
SCAMP3-209ENST00000497470 RIPK3Q9Y572 518 aa22.68■■□□□ 1.22
SCAMP3-209ENST00000497470 OPLAHO14841 1288 aa22.67■■□□□ 1.22
SCAMP3-209ENST00000497470 GNRH1P01148 92 aa22.67■■□□□ 1.22
SCAMP3-209ENST00000497470 ERCC3P19447 782 aa22.67■■□□□ 1.22
SCAMP3-209ENST00000497470 SYT1P21579 422 aa22.67■■□□□ 1.22
SCAMP3-209ENST00000497470 CLK2P49760 499 aaKnown RBP22.67■■□□□ 1.22
SCAMP3-209ENST00000497470 NLRP5P59047 1200 aa22.67■■□□□ 1.22
SCAMP3-209ENST00000497470 SNAP25P60880 206 aa22.67■■□□□ 1.22
SCAMP3-209ENST00000497470 AP3B2Q13367 1082 aa22.67■■□□□ 1.22
SCAMP3-209ENST00000497470 PLS1Q14651 629 aa22.67■■□□□ 1.22
SCAMP3-209ENST00000497470 SAFBQ15424 915 aaKnown RBP eCLIP22.67■■□□□ 1.22
SCAMP3-209ENST00000497470 KRT40Q6A162 431 aa22.67■■□□□ 1.22
SCAMP3-209ENST00000497470 SAMD1Q6SPF0 538 aaPredicted RBP22.67■■□□□ 1.22
SCAMP3-209ENST00000497470 PIBF1Q8WXW3 757 aa22.67■■□□□ 1.22
SCAMP3-209ENST00000497470 GPKOWQ92917 476 aaPredicted RBP eCLIP22.67■■□□□ 1.22
SCAMP3-209ENST00000497470 FOXP1Q9H334 677 aaPredicted RBP22.67■■□□□ 1.22
SCAMP3-209ENST00000497470 VPS54Q9P1Q0 977 aa22.67■■□□□ 1.22
SCAMP3-209ENST00000497470 ADCY7P51828 1080 aa22.66■■□□□ 1.22
SCAMP3-209ENST00000497470 ARHGEF6Q15052 776 aa22.66■■□□□ 1.22
SCAMP3-209ENST00000497470 NPY5RQ15761 445 aa22.66■■□□□ 1.22
SCAMP3-209ENST00000497470 USH1GQ495M9 461 aa22.66■■□□□ 1.22
SCAMP3-209ENST00000497470 CPA4Q9UI42 421 aa22.66■■□□□ 1.22
SCAMP3-209ENST00000497470 GCOM1H8Y6P7 765 aaPredicted RBP22.65■■□□□ 1.22
SCAMP3-209ENST00000497470 M0R2N6 131 aa22.65■■□□□ 1.22
SCAMP3-209ENST00000497470 MEIS2O14770 477 aa22.65■■□□□ 1.22
SCAMP3-209ENST00000497470 TRPA1O75762 1119 aa22.65■■□□□ 1.22
SCAMP3-209ENST00000497470 POLR2MP0CAP2 368 aa22.65■■□□□ 1.22
SCAMP3-209ENST00000497470 U2AF2P26368 475 aaKnown RBP eCLIP22.65■■□□□ 1.227e-8■□□□□ 11
SCAMP3-209ENST00000497470 BLIDQ8IZY5 108 aa22.65■■□□□ 1.22
SCAMP3-209ENST00000497470 SHISA4Q96DD7 197 aa22.65■■□□□ 1.22
SCAMP3-209ENST00000497470 AIFM3Q96NN9 605 aa22.65■■□□□ 1.22
SCAMP3-209ENST00000497470 DIS3Q9Y2L1 958 aaKnown RBP22.65■■□□□ 1.22
SCAMP3-209ENST00000497470 SLC15A5A6NIM6 579 aa22.64■■□□□ 1.21
SCAMP3-209ENST00000497470 H3BQV1 296 aa22.64■■□□□ 1.21
SCAMP3-209ENST00000497470 STX6O43752 255 aa22.64■■□□□ 1.21
SCAMP3-209ENST00000497470 FCER1AP12319 257 aa22.64■■□□□ 1.21
SCAMP3-209ENST00000497470 NUCB2P80303 420 aa22.64■■□□□ 1.21
SCAMP3-209ENST00000497470 SP3Q02447 781 aa22.64■■□□□ 1.21
SCAMP3-209ENST00000497470 IFFO2Q5TF58 517 aa22.64■■□□□ 1.21
SCAMP3-209ENST00000497470 NCAPG2Q86XI2 1143 aa22.64■■□□□ 1.21
SCAMP3-209ENST00000497470 CCAR1Q8IX12 1150 aaKnown RBP22.64■■□□□ 1.21
SCAMP3-209ENST00000497470 REXO1Q8N1G1 1221 aaKnown RBP22.64■■□□□ 1.21
SCAMP3-209ENST00000497470 DNERQ8NFT8 737 aa22.64■■□□□ 1.21
SCAMP3-209ENST00000497470 PORCNQ9H237 461 aa22.64■■□□□ 1.21
SCAMP3-209ENST00000497470 DNAJC25-GNG10A0A024R161 153 aa22.63■■□□□ 1.21
SCAMP3-209ENST00000497470 GPR25O00155 361 aa22.63■■□□□ 1.21
SCAMP3-209ENST00000497470 PPFIA3O75145 1194 aa22.63■■□□□ 1.21
SCAMP3-209ENST00000497470 PTPREP23469 700 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms