RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 ZBTB5O15062 677 aa22.36■■□□□ 1.17
CTDSP1-213ENST00000496785 SGPL1O95470 568 aa22.36■■□□□ 1.17
CTDSP1-213ENST00000496785 IGHA2P01877 340 aa22.36■■□□□ 1.17
CTDSP1-213ENST00000496785 SMARCA1P28370 1054 aa22.36■■□□□ 1.17
CTDSP1-213ENST00000496785 CYP2C19P33261 490 aa22.36■■□□□ 1.17
CTDSP1-213ENST00000496785 QRICH1Q2TAL8 776 aa22.36■■□□□ 1.17
CTDSP1-213ENST00000496785 MUM1L1Q5H9M0 696 aa22.36■■□□□ 1.17
CTDSP1-213ENST00000496785 DEFB118Q96PH6 123 aa22.36■■□□□ 1.17
CTDSP1-213ENST00000496785 RIOX1Q9H6W3 641 aa22.36■■□□□ 1.17
CTDSP1-213ENST00000496785 CYP39A1Q9NYL5 469 aa22.36■■□□□ 1.17
CTDSP1-213ENST00000496785 CNPY2Q9Y2B0 182 aa22.36■■□□□ 1.17
CTDSP1-213ENST00000496785 CYBAP13498 195 aa22.35■■□□□ 1.17
CTDSP1-213ENST00000496785 EN2P19622 333 aaPredicted RBP22.35■■□□□ 1.17
CTDSP1-213ENST00000496785 CASTP20810 708 aaKnown RBP22.35■■□□□ 1.17
CTDSP1-213ENST00000496785 RCAN1P53805 252 aa22.35■■□□□ 1.17
CTDSP1-213ENST00000496785 USH1GQ495M9 461 aa22.35■■□□□ 1.17
CTDSP1-213ENST00000496785 APOA5Q6Q788 366 aa22.35■■□□□ 1.17
CTDSP1-213ENST00000496785 MTMR8Q96EF0 704 aa22.35■■□□□ 1.17
CTDSP1-213ENST00000496785 SPZ1Q9BXG8 430 aa22.35■■□□□ 1.17
CTDSP1-213ENST00000496785 MRPL11Q9Y3B7 192 aaKnown RBP22.35■■□□□ 1.17
CTDSP1-213ENST00000496785 PLXNA1Q9UIW2 1896 aa22.34■■□□□ 1.17
CTDSP1-213ENST00000496785 RPS6KB1P23443 525 aa22.34■■□□□ 1.17
CTDSP1-213ENST00000496785 MLLT1Q03111 559 aaPredicted RBP22.34■■□□□ 1.17
CTDSP1-213ENST00000496785 MAMDC4Q6UXC1 1216 aa22.34■■□□□ 1.17
CTDSP1-213ENST00000496785 MCF2L2Q86YR7 1114 aa22.34■■□□□ 1.17
CTDSP1-213ENST00000496785 FAM133AQ8N9E0 248 aa22.34■■□□□ 1.17
CTDSP1-213ENST00000496785 RGS22Q8NE09 1264 aa22.34■■□□□ 1.17
CTDSP1-213ENST00000496785 MYL10Q9BUA6 226 aa22.34■■□□□ 1.17
CTDSP1-213ENST00000496785 TM6SF1Q9BZW5 370 aa22.34■■□□□ 1.17
CTDSP1-213ENST00000496785 RBM28Q9NW13 759 aaKnown RBP22.34■■□□□ 1.17
CTDSP1-213ENST00000496785 ADD3Q9UEY8 706 aaKnown RBP22.34■■□□□ 1.17
CTDSP1-213ENST00000496785 KIAA0100Q14667 2235 aaKnown RBP22.34■■□□□ 1.17
CTDSP1-213ENST00000496785 LOC102724159A0A0B4J2E5 919 aa22.33■■□□□ 1.17
CTDSP1-213ENST00000496785 PTPDC1A2A3K4 754 aa22.33■■□□□ 1.17
CTDSP1-213ENST00000496785 ASB14A6NK59 587 aa22.33■■□□□ 1.17
CTDSP1-213ENST00000496785 ZBTB43O43298 467 aa22.33■■□□□ 1.17
CTDSP1-213ENST00000496785 TFRCP02786 760 aaKnown RBP22.33■■□□□ 1.17
CTDSP1-213ENST00000496785 CNGA1P29973 690 aa22.33■■□□□ 1.17
CTDSP1-213ENST00000496785 COL9A3Q14050 684 aaPredicted RBP22.33■■□□□ 1.17
CTDSP1-213ENST00000496785 PPP2R5BQ15173 497 aa22.33■■□□□ 1.17
CTDSP1-213ENST00000496785 PWP2Q15269 919 aaKnown RBP22.33■■□□□ 1.17
CTDSP1-213ENST00000496785 RNF207Q6ZRF8 634 aa22.33■■□□□ 1.17
CTDSP1-213ENST00000496785 MICU3Q86XE3 530 aa22.33■■□□□ 1.17
CTDSP1-213ENST00000496785 FBXL16Q8N461 479 aa22.33■■□□□ 1.17
CTDSP1-213ENST00000496785 FANCBQ8NB91 859 aa22.33■■□□□ 1.17
CTDSP1-213ENST00000496785 TCEANC2Q96MN5 208 aa22.33■■□□□ 1.17
CTDSP1-213ENST00000496785 MPHOSPH6Q99547 160 aaKnown RBP22.33■■□□□ 1.17
CTDSP1-213ENST00000496785 PNMA6FA0A0J9YX94 578 aa22.32■■□□□ 1.16
CTDSP1-213ENST00000496785 NFIBO00712 420 aa22.32■■□□□ 1.16
CTDSP1-213ENST00000496785 CCND3P30281 292 aaPredicted RBP22.32■■□□□ 1.16
CTDSP1-213ENST00000496785 ANAPC15P60006 121 aa22.32■■□□□ 1.16
CTDSP1-213ENST00000496785 HOMER1Q86YM7 354 aa22.32■■□□□ 1.16
CTDSP1-213ENST00000496785 ANKLE1Q8NAG6 615 aa22.32■■□□□ 1.16
CTDSP1-213ENST00000496785 CLEC4DQ8WXI8 215 aa22.32■■□□□ 1.16
CTDSP1-213ENST00000496785 RRP36Q96EU6 259 aaKnown RBP22.32■■□□□ 1.16
CTDSP1-213ENST00000496785 CRISPLD2Q9H0B8 497 aa22.32■■□□□ 1.16
CTDSP1-213ENST00000496785 SEC63Q9UGP8 760 aaKnown RBP22.32■■□□□ 1.16
CTDSP1-213ENST00000496785 DDX20Q9UHI6 824 aaKnown RBP22.32■■□□□ 1.16
CTDSP1-213ENST00000496785 CYP46A1Q9Y6A2 500 aa22.32■■□□□ 1.16
CTDSP1-213ENST00000496785 KLF18A0A0U1RQI7 1052 aa22.31■■□□□ 1.16
CTDSP1-213ENST00000496785 B4DLN1 442 aa22.31■■□□□ 1.16
CTDSP1-213ENST00000496785 SEPT4O43236 478 aa22.31■■□□□ 1.16
CTDSP1-213ENST00000496785 MRPL12P52815 198 aaKnown RBP22.31■■□□□ 1.16
CTDSP1-213ENST00000496785 CNTN2Q02246 1040 aa22.31■■□□□ 1.16
CTDSP1-213ENST00000496785 BAATQ14032 418 aaPredicted RBP22.31■■□□□ 1.16
CTDSP1-213ENST00000496785 Q6ZUG5 572 aa22.31■■□□□ 1.16
CTDSP1-213ENST00000496785 RUFY3Q7L099 469 aa22.31■■□□□ 1.16
CTDSP1-213ENST00000496785 SAMD3Q8N6K7 520 aa22.31■■□□□ 1.16
CTDSP1-213ENST00000496785 PIGSQ96S52 555 aa22.31■■□□□ 1.16
CTDSP1-213ENST00000496785 ZSWIM6Q9HCJ5 1215 aa22.31■■□□□ 1.16
CTDSP1-213ENST00000496785 PCDHA1Q9Y5I3 950 aa22.31■■□□□ 1.16
CTDSP1-213ENST00000496785 MYH6P13533 1939 aa22.3■■□□□ 1.16
CTDSP1-213ENST00000496785 CCDC196A0A1B0GTZ2 297 aa22.3■■□□□ 1.16
CTDSP1-213ENST00000496785 CYTH3O43739 400 aa22.3■■□□□ 1.16
CTDSP1-213ENST00000496785 RTN1Q16799 776 aa22.3■■□□□ 1.16
CTDSP1-213ENST00000496785 BRF1Q92994 677 aa22.3■■□□□ 1.16
CTDSP1-213ENST00000496785 SHISA4Q96DD7 197 aa22.3■■□□□ 1.16
CTDSP1-213ENST00000496785 ABHD16BQ9H3Z7 469 aa22.3■■□□□ 1.16
CTDSP1-213ENST00000496785 MAP3K20Q9NYL2 800 aaKnown RBP22.3■■□□□ 1.16
CTDSP1-213ENST00000496785 OGDHLQ9ULD0 1010 aa22.3■■□□□ 1.16
CTDSP1-213ENST00000496785 NAP1L2Q9ULW6 460 aaPredicted RBP22.3■■□□□ 1.16
CTDSP1-213ENST00000496785 GOLGA8AA7E2F4 631 aa22.29■■□□□ 1.16
CTDSP1-213ENST00000496785 GOLGA8BA8MQT2 603 aa22.29■■□□□ 1.16
CTDSP1-213ENST00000496785 CPA1P15085 419 aa22.29■■□□□ 1.16
CTDSP1-213ENST00000496785 TAL1P17542 331 aaPredicted RBP22.29■■□□□ 1.16
CTDSP1-213ENST00000496785 RXRAP19793 462 aa22.29■■□□□ 1.16
CTDSP1-213ENST00000496785 RPS6P62753 249 aaKnown RBP22.29■■□□□ 1.16
CTDSP1-213ENST00000496785 TMTC3Q6ZXV5 915 aa22.29■■□□□ 1.16
CTDSP1-213ENST00000496785 ARMCX2Q7L311 632 aa22.29■■□□□ 1.16
CTDSP1-213ENST00000496785 CCDC144CPQ8IYA2 1237 aa22.29■■□□□ 1.16
CTDSP1-213ENST00000496785 DNERQ8NFT8 737 aa22.29■■□□□ 1.16
CTDSP1-213ENST00000496785 AGXT2Q9BYV1 514 aa22.29■■□□□ 1.16
CTDSP1-213ENST00000496785 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.29■■□□□ 1.16
CTDSP1-213ENST00000496785 FARP2O94887 1054 aaPredicted RBP22.28■■□□□ 1.16
CTDSP1-213ENST00000496785 AKR1A1P14550 325 aa22.28■■□□□ 1.16
CTDSP1-213ENST00000496785 CALML3P27482 149 aa22.28■■□□□ 1.16
CTDSP1-213ENST00000496785 SLC30A10Q6XR72 485 aa22.28■■□□□ 1.16
CTDSP1-213ENST00000496785 TRPV1Q8NER1 839 aa22.28■■□□□ 1.16
CTDSP1-213ENST00000496785 FGD4Q96M96 766 aa22.28■■□□□ 1.16
CTDSP1-213ENST00000496785 BRPF3Q9ULD4 1205 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms