RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 KLRC4O43908 158 aa14.69□□□□□ -0.06
GARNL3-220ENST00000496711 RHOBTB3O94955 611 aa14.69□□□□□ -0.06
GARNL3-220ENST00000496711 PRCPP42785 496 aa14.69□□□□□ -0.06
GARNL3-220ENST00000496711 KMT5BQ4FZB7 885 aa14.69□□□□□ -0.06
GARNL3-220ENST00000496711 DACT2Q5SW24 774 aa14.69□□□□□ -0.06
GARNL3-220ENST00000496711 ADSSL1Q8N142 457 aa14.69□□□□□ -0.06
GARNL3-220ENST00000496711 IGSF22Q8N9C0 903 aa14.69□□□□□ -0.06
GARNL3-220ENST00000496711 PLIN2Q99541 437 aa14.69□□□□□ -0.06
GARNL3-220ENST00000496711 DNAJC18Q9H819 358 aa14.69□□□□□ -0.06
GARNL3-220ENST00000496711 KCNQ5Q9NR82 932 aa14.69□□□□□ -0.06
GARNL3-220ENST00000496711 PHLPP2Q6ZVD8 1323 aa14.68□□□□□ -0.06
GARNL3-220ENST00000496711 ATP2B2Q01814 1243 aa14.68□□□□□ -0.06
GARNL3-220ENST00000496711 NCBP1Q09161 790 aaKnown RBP14.68□□□□□ -0.06
GARNL3-220ENST00000496711 STIM1Q13586 685 aa14.68□□□□□ -0.06
GARNL3-220ENST00000496711 KRT31Q15323 416 aa14.68□□□□□ -0.06
GARNL3-220ENST00000496711 SYT10Q6XYQ8 523 aa14.68□□□□□ -0.06
GARNL3-220ENST00000496711 PPFIBP1Q86W92 1011 aa14.68□□□□□ -0.06
GARNL3-220ENST00000496711 ZFPM1Q8IX07 1006 aa14.68□□□□□ -0.06
GARNL3-220ENST00000496711 LRRC15Q8TF66 581 aa14.68□□□□□ -0.06
GARNL3-220ENST00000496711 PANX2Q96RD6 677 aa14.68□□□□□ -0.06
GARNL3-220ENST00000496711 IDI2Q9BXS1 227 aa14.68□□□□□ -0.06
GARNL3-220ENST00000496711 RIC8AQ9NPQ8 531 aa14.68□□□□□ -0.06
GARNL3-220ENST00000496711 PPP2R2CQ9Y2T4 447 aa14.68□□□□□ -0.06
GARNL3-220ENST00000496711 GOLGA6L9A6NEM1 432 aa14.67□□□□□ -0.06
GARNL3-220ENST00000496711 KCNJ18B7U540 433 aa14.67□□□□□ -0.06
GARNL3-220ENST00000496711 COBLO75128 1261 aa14.67□□□□□ -0.06
GARNL3-220ENST00000496711 CCT6AP40227 531 aaKnown RBP14.67□□□□□ -0.06
GARNL3-220ENST00000496711 TECP42680 631 aa14.67□□□□□ -0.06
GARNL3-220ENST00000496711 RBM5P52756 815 aaKnown RBP eCLIP14.67□□□□□ -0.06
GARNL3-220ENST00000496711 KCNJ12Q14500 433 aa14.67□□□□□ -0.06
GARNL3-220ENST00000496711 CALCRLQ16602 461 aa14.67□□□□□ -0.06
GARNL3-220ENST00000496711 REXO1L1PQ8IX06 675 aa14.67□□□□□ -0.06
GARNL3-220ENST00000496711 CCDC47Q96A33 483 aaKnown RBP14.67□□□□□ -0.06
GARNL3-220ENST00000496711 CALML4Q96GE6 196 aa14.67□□□□□ -0.06
GARNL3-220ENST00000496711 ZBTB5O15062 677 aa14.67□□□□□ -0.06
GARNL3-220ENST00000496711 PPP1R11O60927 126 aaPredicted RBP14.67□□□□□ -0.06
GARNL3-220ENST00000496711 NPM3O75607 178 aaKnown RBP14.67□□□□□ -0.06
GARNL3-220ENST00000496711 FXR2P51116 673 aaKnown RBP eCLIP14.67□□□□□ -0.06
GARNL3-220ENST00000496711 COPB1P53618 953 aaKnown RBP14.67□□□□□ -0.06
GARNL3-220ENST00000496711 CACNB3P54284 484 aa14.67□□□□□ -0.06
GARNL3-220ENST00000496711 ETF1P62495 437 aaKnown RBP14.67□□□□□ -0.06
GARNL3-220ENST00000496711 TCP10Q12799 353 aa14.67□□□□□ -0.06
GARNL3-220ENST00000496711 TMEM266Q2M3C6 531 aa14.67□□□□□ -0.06
GARNL3-220ENST00000496711 TCP11X2Q5H9J9 407 aa14.67□□□□□ -0.06
GARNL3-220ENST00000496711 TTBK2Q6IQ55 1244 aa14.67□□□□□ -0.06
GARNL3-220ENST00000496711 GIMAP8Q8ND71 665 aaPredicted RBP14.67□□□□□ -0.06
GARNL3-220ENST00000496711 CUL5Q93034 780 aa14.67□□□□□ -0.06
GARNL3-220ENST00000496711 CNKSR1Q969H4 720 aa14.67□□□□□ -0.06
GARNL3-220ENST00000496711 MTMR8Q96EF0 704 aa14.67□□□□□ -0.06
GARNL3-220ENST00000496711 MTMR9Q96QG7 549 aa14.67□□□□□ -0.06
GARNL3-220ENST00000496711 NAA15Q9BXJ9 866 aaKnown RBP14.67□□□□□ -0.06
GARNL3-220ENST00000496711 PI4KBQ9UBF8 816 aa14.67□□□□□ -0.06
GARNL3-220ENST00000496711 FAM198AQ9UFP1 575 aa14.67□□□□□ -0.06
GARNL3-220ENST00000496711 SERPINA10Q9UK55 444 aa14.67□□□□□ -0.06
GARNL3-220ENST00000496711 MAPK8IP1Q9UQF2 711 aa14.67□□□□□ -0.06
GARNL3-220ENST00000496711 PCDHAC2Q9Y5I4 1007 aa14.67□□□□□ -0.06
GARNL3-220ENST00000496711 LRRC10BA6NIK2 292 aa14.66□□□□□ -0.06
GARNL3-220ENST00000496711 H7C1D1 291 aa14.66□□□□□ -0.06
GARNL3-220ENST00000496711 PSMA7O14818 248 aa14.66□□□□□ -0.06
GARNL3-220ENST00000496711 N4BP3O15049 544 aa14.66□□□□□ -0.06
GARNL3-220ENST00000496711 SLC37A4O43826 429 aa14.66□□□□□ -0.06
GARNL3-220ENST00000496711 MFAP3LO75121 409 aa14.66□□□□□ -0.06
GARNL3-220ENST00000496711 TDP2O95551 362 aa14.66□□□□□ -0.06
GARNL3-220ENST00000496711 TXKP42681 527 aa14.66□□□□□ -0.06
GARNL3-220ENST00000496711 TNNI2P48788 182 aa14.66□□□□□ -0.06
GARNL3-220ENST00000496711 CLK2P49760 499 aaKnown RBP14.66□□□□□ -0.06
GARNL3-220ENST00000496711 RBL2Q08999 1139 aa14.66□□□□□ -0.06
GARNL3-220ENST00000496711 KCTD1Q719H9 257 aa14.66□□□□□ -0.06
GARNL3-220ENST00000496711 MMTAG2Q9BU76 263 aaKnown RBP14.66□□□□□ -0.06
GARNL3-220ENST00000496711 TRIM34Q9BYJ4 488 aa14.66□□□□□ -0.06
GARNL3-220ENST00000496711 GTPBP4Q9BZE4 634 aaKnown RBP14.66□□□□□ -0.06
GARNL3-220ENST00000496711 TRIM9Q9C026 710 aa14.66□□□□□ -0.06
GARNL3-220ENST00000496711 L2HGDHQ9H9P8 463 aa14.66□□□□□ -0.06
GARNL3-220ENST00000496711 COL2A1P02458 1487 aaPredicted RBP14.66□□□□□ -0.06
GARNL3-220ENST00000496711 DDTLA6NHG4 134 aaPredicted RBP14.65□□□□□ -0.06
GARNL3-220ENST00000496711 USP17L10C9JJH3 530 aa14.65□□□□□ -0.06
GARNL3-220ENST00000496711 TPM1P09493 284 aa14.65□□□□□ -0.06
GARNL3-220ENST00000496711 CHRNA5P30532 468 aa14.65□□□□□ -0.06
GARNL3-220ENST00000496711 SLC16A2P36021 539 aa14.65□□□□□ -0.06
GARNL3-220ENST00000496711 AMPD3Q01432 767 aa14.65□□□□□ -0.06
GARNL3-220ENST00000496711 CERKLQ49MI3 558 aaPredicted RBP14.65□□□□□ -0.06
GARNL3-220ENST00000496711 CNGA4Q8IV77 575 aa14.65□□□□□ -0.06
GARNL3-220ENST00000496711 DCAF4Q8WV16 495 aa14.65□□□□□ -0.06
GARNL3-220ENST00000496711 CCDC51Q96ER9 411 aa14.65□□□□□ -0.06
GARNL3-220ENST00000496711 ERO1AQ96HE7 468 aa14.65□□□□□ -0.06
GARNL3-220ENST00000496711 C7orf25Q9BPX7 421 aa14.65□□□□□ -0.06
GARNL3-220ENST00000496711 RAB34Q9BZG1 259 aa14.65□□□□□ -0.06
GARNL3-220ENST00000496711 EXOC1Q9NV70 894 aa14.65□□□□□ -0.06
GARNL3-220ENST00000496711 TAB2Q9NYJ8 693 aa14.65□□□□□ -0.06
GARNL3-220ENST00000496711 NYAP2Q9P242 653 aa14.65□□□□□ -0.06
GARNL3-220ENST00000496711 ZNF219Q9P2Y4 722 aaPredicted RBP14.65□□□□□ -0.06
GARNL3-220ENST00000496711 LRWD1Q9UFC0 647 aa14.65□□□□□ -0.06
GARNL3-220ENST00000496711 ZNF215Q9UL58 517 aaPredicted RBP14.65□□□□□ -0.06
GARNL3-220ENST00000496711 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.65□□□□□ -0.06
GARNL3-220ENST00000496711 TRIM49BA6NDI0 452 aa14.65□□□□□ -0.06
GARNL3-220ENST00000496711 FAM196BA6NMK8 535 aa14.65□□□□□ -0.06
GARNL3-220ENST00000496711 SLU7O95391 586 aaKnown RBP14.65□□□□□ -0.06
GARNL3-220ENST00000496711 SLURP2P0DP57 97 aa14.65□□□□□ -0.06
GARNL3-220ENST00000496711 MRPL12P52815 198 aaKnown RBP14.65□□□□□ -0.06
GARNL3-220ENST00000496711 ASIC1P78348 528 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms