RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 NTRK3Q16288 839 aa7.04□□□□□ -1.28
SSBP1-213ENST00000496622 RPAINQ86UA6 219 aa7.04□□□□□ -1.28
SSBP1-213ENST00000496622 CLEC10AQ8IUN9 316 aa7.04□□□□□ -1.28
SSBP1-213ENST00000496622 WDR66Q8TBY9 1149 aa7.04□□□□□ -1.28
SSBP1-213ENST00000496622 MICAL1Q8TDZ2 1067 aa7.04□□□□□ -1.28
SSBP1-213ENST00000496622 SLC16A10Q8TF71 515 aa7.04□□□□□ -1.28
SSBP1-213ENST00000496622 PGBD1Q96JS3 809 aa7.04□□□□□ -1.28
SSBP1-213ENST00000496622 C8orf76Q96K31 380 aa7.04□□□□□ -1.28
SSBP1-213ENST00000496622 SPATA32Q96LK8 384 aa7.04□□□□□ -1.28
SSBP1-213ENST00000496622 TRERF1Q96PN7 1200 aa7.04□□□□□ -1.28
SSBP1-213ENST00000496622 CRAMP1Q96RY5 1269 aa7.04□□□□□ -1.28
SSBP1-213ENST00000496622 CXorf56Q9H5V9 222 aa7.04□□□□□ -1.28
SSBP1-213ENST00000496622 FKBPLQ9UIM3 349 aa7.04□□□□□ -1.28
SSBP1-213ENST00000496622 TTC24A2A3L6 582 aaPredicted RBP7.04□□□□□ -1.28
SSBP1-213ENST00000496622 WNT7AO00755 349 aa7.04□□□□□ -1.28
SSBP1-213ENST00000496622 ATP2B1P20020 1258 aa7.04□□□□□ -1.28
SSBP1-213ENST00000496622 ATP2B4P23634 1241 aa7.04□□□□□ -1.28
SSBP1-213ENST00000496622 KRT85P78386 507 aa7.04□□□□□ -1.28
SSBP1-213ENST00000496622 SP8Q8IXZ3 490 aa7.04□□□□□ -1.28
SSBP1-213ENST00000496622 CKAP2LQ8IYA6 745 aa7.04□□□□□ -1.28
SSBP1-213ENST00000496622 ANKRD13AQ8IZ07 590 aa7.04□□□□□ -1.28
SSBP1-213ENST00000496622 LEO1Q8WVC0 666 aaPredicted RBP7.04□□□□□ -1.28
SSBP1-213ENST00000496622 POM121Q96HA1 1249 aa7.04□□□□□ -1.28
SSBP1-213ENST00000496622 RTFDC1Q9BY42 306 aaPredicted RBP7.04□□□□□ -1.28
SSBP1-213ENST00000496622 CRNKL1Q9BZJ0 848 aaKnown RBP7.04□□□□□ -1.28
SSBP1-213ENST00000496622 TOR4AQ9NXH8 423 aa7.04□□□□□ -1.28
SSBP1-213ENST00000496622 CALCOCO1Q9P1Z2 691 aa7.04□□□□□ -1.28
SSBP1-213ENST00000496622 ZNF831Q5JPB2 1677 aa7.04□□□□□ -1.28
SSBP1-213ENST00000496622 LAMB2P55268 1798 aa7.03□□□□□ -1.28
SSBP1-213ENST00000496622 TSPY2A6NKD2 308 aa7.03□□□□□ -1.28
SSBP1-213ENST00000496622 FAM196BA6NMK8 535 aa7.03□□□□□ -1.28
SSBP1-213ENST00000496622 H0YHG0 523 aa7.03□□□□□ -1.28
SSBP1-213ENST00000496622 H0YIN7 160 aa7.03□□□□□ -1.28
SSBP1-213ENST00000496622 SIAH2O43255 324 aa7.03□□□□□ -1.28
SSBP1-213ENST00000496622 PLEKHA8P1O95397 391 aa7.03□□□□□ -1.28
SSBP1-213ENST00000496622 IL1R1P14778 569 aa7.03□□□□□ -1.28
SSBP1-213ENST00000496622 NPR1P16066 1061 aa7.03□□□□□ -1.28
SSBP1-213ENST00000496622 CD151P48509 253 aa7.03□□□□□ -1.28
SSBP1-213ENST00000496622 INHBEP58166 350 aa7.03□□□□□ -1.28
SSBP1-213ENST00000496622 SARNPP82979 210 aaKnown RBP7.03□□□□□ -1.28
SSBP1-213ENST00000496622 AOC3Q16853 763 aa7.03□□□□□ -1.28
SSBP1-213ENST00000496622 ZNF662Q6ZS27 426 aa7.03□□□□□ -1.28
SSBP1-213ENST00000496622 FBXO18Q8NFZ0 1043 aa7.03□□□□□ -1.28
SSBP1-213ENST00000496622 ESR2Q92731 530 aa7.03□□□□□ -1.28
SSBP1-213ENST00000496622 SHISA4Q96DD7 197 aa7.03□□□□□ -1.28
SSBP1-213ENST00000496622 MASTLQ96GX5 879 aa7.03□□□□□ -1.28
SSBP1-213ENST00000496622 TMEM87BQ96K49 555 aa7.03□□□□□ -1.28
SSBP1-213ENST00000496622 ALG1Q9BT22 464 aa7.03□□□□□ -1.28
SSBP1-213ENST00000496622 KRT23Q9C075 422 aa7.03□□□□□ -1.28
SSBP1-213ENST00000496622 STK32BQ9NY57 414 aa7.03□□□□□ -1.28
SSBP1-213ENST00000496622 MKRN1Q9UHC7 482 aaKnown RBP7.03□□□□□ -1.28
SSBP1-213ENST00000496622 TTF2Q9UNY4 1162 aaKnown RBP7.03□□□□□ -1.28
SSBP1-213ENST00000496622 ATP6V1DQ9Y5K8 247 aa7.03□□□□□ -1.28
SSBP1-213ENST00000496622 CLIC4Q9Y696 253 aa7.03□□□□□ -1.28
SSBP1-213ENST00000496622 ERICH2A1L162 156 aa7.03□□□□□ -1.28
SSBP1-213ENST00000496622 ADAMTS3O15072 1205 aa7.03□□□□□ -1.28
SSBP1-213ENST00000496622 PDE6BP35913 854 aa7.03□□□□□ -1.28
SSBP1-213ENST00000496622 IARSP41252 1262 aaKnown RBP7.03□□□□□ -1.28
SSBP1-213ENST00000496622 EIF6P56537 245 aaKnown RBP7.03□□□□□ -1.28
SSBP1-213ENST00000496622 WNT7BP56706 349 aa7.03□□□□□ -1.28
SSBP1-213ENST00000496622 UBE2HP62256 183 aa7.03□□□□□ -1.28
SSBP1-213ENST00000496622 HMGN5P82970 282 aaKnown RBP7.03□□□□□ -1.28
SSBP1-213ENST00000496622 TFAP4Q01664 338 aa7.03□□□□□ -1.28
SSBP1-213ENST00000496622 TCP10Q12799 353 aa7.03□□□□□ -1.28
SSBP1-213ENST00000496622 NFIAQ12857 509 aa7.03□□□□□ -1.28
SSBP1-213ENST00000496622 SEC23AQ15436 765 aa7.03□□□□□ -1.28
SSBP1-213ENST00000496622 SHROOM1Q2M3G4 852 aaPredicted RBP7.03□□□□□ -1.28
SSBP1-213ENST00000496622 SGMS1Q86VZ5 419 aa7.03□□□□□ -1.28
SSBP1-213ENST00000496622 ZFPM1Q8IX07 1006 aa7.03□□□□□ -1.28
SSBP1-213ENST00000496622 ZNF654Q8IZM8 581 aa7.03□□□□□ -1.28
SSBP1-213ENST00000496622 FBXL16Q8N461 479 aa7.03□□□□□ -1.28
SSBP1-213ENST00000496622 FANCBQ8NB91 859 aa7.03□□□□□ -1.28
SSBP1-213ENST00000496622 SMC1BQ8NDV3 1235 aa7.03□□□□□ -1.28
SSBP1-213ENST00000496622 ZSCAN10Q96SZ4 725 aaPredicted RBP7.03□□□□□ -1.28
SSBP1-213ENST00000496622 LLPHQ9BRT6 129 aaKnown RBP7.03□□□□□ -1.28
SSBP1-213ENST00000496622 CNNM2Q9H8M5 875 aa7.03□□□□□ -1.28
SSBP1-213ENST00000496622 RMI1Q9H9A7 625 aa7.03□□□□□ -1.28
SSBP1-213ENST00000496622 IL17RBQ9NRM6 502 aa7.03□□□□□ -1.28
SSBP1-213ENST00000496622 IRAK4Q9NWZ3 460 aa7.03□□□□□ -1.28
SSBP1-213ENST00000496622 DACT1Q9NYF0 836 aa7.03□□□□□ -1.28
SSBP1-213ENST00000496622 DACH1Q9UI36 760 aa7.03□□□□□ -1.28
SSBP1-213ENST00000496622 STX8Q9UNK0 236 aa7.03□□□□□ -1.28
SSBP1-213ENST00000496622 CACNA1SQ13698 1873 aa7.03□□□□□ -1.28
SSBP1-213ENST00000496622 BTBD18B2RXH4 712 aa7.02□□□□□ -1.29
SSBP1-213ENST00000496622 GOLGA8HP0CJ92 632 aa7.02□□□□□ -1.29
SSBP1-213ENST00000496622 MARCKSP29966 332 aaPredicted RBP7.02□□□□□ -1.29
SSBP1-213ENST00000496622 LIFRP42702 1097 aa7.02□□□□□ -1.29
SSBP1-213ENST00000496622 NR5A1Q13285 461 aa7.02□□□□□ -1.29
SSBP1-213ENST00000496622 IRF5Q13568 498 aa7.02□□□□□ -1.29
SSBP1-213ENST00000496622 MCM6Q14566 821 aa7.02□□□□□ -1.29
SSBP1-213ENST00000496622 NOM1Q5C9Z4 860 aaKnown RBP7.02□□□□□ -1.29
SSBP1-213ENST00000496622 IFIT1BQ5T764 474 aaKnown RBP7.02□□□□□ -1.29
SSBP1-213ENST00000496622 SH3RF1Q7Z6J0 888 aa7.02□□□□□ -1.29
SSBP1-213ENST00000496622 TEX11Q8IYF3 940 aa7.02□□□□□ -1.29
SSBP1-213ENST00000496622 CYP4X1Q8N118 509 aa7.02□□□□□ -1.29
SSBP1-213ENST00000496622 HPS1Q92902 700 aa7.02□□□□□ -1.29
SSBP1-213ENST00000496622 TMX4Q9H1E5 349 aaPredicted RBP7.02□□□□□ -1.29
SSBP1-213ENST00000496622 DDX4Q9NQI0 724 aaKnown RBP7.02□□□□□ -1.29
SSBP1-213ENST00000496622 ZMYM6O95789 1325 aa7.02□□□□□ -1.29
SSBP1-213ENST00000496622 GOLGA6L4A6NEF3 574 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms