RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.18■□□□□ 0.98
TSSC4-210ENST00000496468 PCDHA1Q9Y5I3 950 aa21.18■□□□□ 0.98
TSSC4-210ENST00000496468 ZNF236Q9UL36 1845 aa21.18■□□□□ 0.98
TSSC4-210ENST00000496468 DTNBO60941 627 aa21.17■□□□□ 0.98
TSSC4-210ENST00000496468 MAPK4P31152 587 aa21.17■□□□□ 0.98
TSSC4-210ENST00000496468 SP3Q02447 781 aa21.17■□□□□ 0.98
TSSC4-210ENST00000496468 NOM1Q5C9Z4 860 aaKnown RBP21.17■□□□□ 0.98
TSSC4-210ENST00000496468 PPP1R18Q6NYC8 613 aa21.17■□□□□ 0.98
TSSC4-210ENST00000496468 SMARCC2Q8TAQ2 1214 aa21.17■□□□□ 0.98
TSSC4-210ENST00000496468 WASF1Q92558 559 aa21.17■□□□□ 0.98
TSSC4-210ENST00000496468 TRERF1Q96PN7 1200 aa21.17■□□□□ 0.98
TSSC4-210ENST00000496468 MROH8Q9H579 483 aa21.17■□□□□ 0.98
TSSC4-210ENST00000496468 ACAD9Q9H845 621 aa21.17■□□□□ 0.98
TSSC4-210ENST00000496468 EFCC1Q9HA90 598 aa21.17■□□□□ 0.98
TSSC4-210ENST00000496468 FBXO40Q9UH90 709 aa21.17■□□□□ 0.98
TSSC4-210ENST00000496468 RIPK3Q9Y572 518 aa21.17■□□□□ 0.98
TSSC4-210ENST00000496468 HSPA1AP0DMV8 641 aaKnown RBP21.16■□□□□ 0.98
TSSC4-210ENST00000496468 HSPA1BP0DMV9 641 aaKnown RBP21.16■□□□□ 0.98
TSSC4-210ENST00000496468 LACTBP83111 547 aaPredicted RBP21.16■□□□□ 0.98
TSSC4-210ENST00000496468 PKN1Q16512 942 aa21.16■□□□□ 0.98
TSSC4-210ENST00000496468 CHST13Q8NET6 341 aa21.16■□□□□ 0.98
TSSC4-210ENST00000496468 COA7Q96BR5 231 aa21.16■□□□□ 0.98
TSSC4-210ENST00000496468 TSHZ2Q9NRE2 1034 aa21.16■□□□□ 0.98
TSSC4-210ENST00000496468 BARHL2Q9NY43 387 aa21.16■□□□□ 0.98
TSSC4-210ENST00000496468 MRPL11Q9Y3B7 192 aaKnown RBP21.16■□□□□ 0.98
TSSC4-210ENST00000496468 STXBP3O00186 592 aa21.15■□□□□ 0.98
TSSC4-210ENST00000496468 FKTNO75072 461 aa21.15■□□□□ 0.98
TSSC4-210ENST00000496468 NAPAP54920 295 aa21.15■□□□□ 0.98
TSSC4-210ENST00000496468 KIF22Q14807 665 aa21.15■□□□□ 0.98
TSSC4-210ENST00000496468 SMC3Q9UQE7 1217 aa21.15■□□□□ 0.98
TSSC4-210ENST00000496468 IVNS1ABPQ9Y6Y0 642 aa21.15■□□□□ 0.98
TSSC4-210ENST00000496468 NFIBO00712 420 aa21.14■□□□□ 0.97
TSSC4-210ENST00000496468 ECM2O94769 699 aaPredicted RBP21.14■□□□□ 0.97
TSSC4-210ENST00000496468 HSP90AA1P07900 732 aaKnown RBP21.14■□□□□ 0.97
TSSC4-210ENST00000496468 FCGRTP55899 365 aa21.14■□□□□ 0.97
TSSC4-210ENST00000496468 MUM1L1Q5H9M0 696 aa21.14■□□□□ 0.97
TSSC4-210ENST00000496468 GPR142Q7Z601 462 aa21.14■□□□□ 0.97
TSSC4-210ENST00000496468 FAM184AQ8NB25 1140 aa21.14■□□□□ 0.97
TSSC4-210ENST00000496468 CCDC148Q8NFR7 591 aa21.14■□□□□ 0.97
TSSC4-210ENST00000496468 CCDC12Q8WUD4 166 aaPredicted RBP21.14■□□□□ 0.97
TSSC4-210ENST00000496468 KIF3AQ9Y496 699 aa21.14■□□□□ 0.97
TSSC4-210ENST00000496468 SMCHD1A6NHR9 2005 aa21.14■□□□□ 0.97
TSSC4-210ENST00000496468 TNPO2O14787 897 aaKnown RBP21.13■□□□□ 0.97
TSSC4-210ENST00000496468 FDPSP14324 419 aaKnown RBP21.13■□□□□ 0.97
TSSC4-210ENST00000496468 PLEKHH3Q7Z736 793 aa21.13■□□□□ 0.97
TSSC4-210ENST00000496468 CD99L2Q8TCZ2 262 aa21.13■□□□□ 0.97
TSSC4-210ENST00000496468 ZNF296Q8WUU4 475 aaPredicted RBP21.13■□□□□ 0.97
TSSC4-210ENST00000496468 CLEC4DQ8WXI8 215 aa21.13■□□□□ 0.97
TSSC4-210ENST00000496468 ERO1AQ96HE7 468 aa21.13■□□□□ 0.97
TSSC4-210ENST00000496468 INTS4Q96HW7 963 aaKnown RBP21.13■□□□□ 0.97
TSSC4-210ENST00000496468 AIFM3Q96NN9 605 aa21.13■□□□□ 0.97
TSSC4-210ENST00000496468 MMP19Q99542 508 aa21.13■□□□□ 0.97
TSSC4-210ENST00000496468 ALG1Q9BT22 464 aa21.13■□□□□ 0.97
TSSC4-210ENST00000496468 VPS54Q9P1Q0 977 aa21.13■□□□□ 0.97
TSSC4-210ENST00000496468 PFASO15067 1338 aa21.12■□□□□ 0.97
TSSC4-210ENST00000496468 FOXN1O15353 648 aa21.12■□□□□ 0.97
TSSC4-210ENST00000496468 XBP1P17861 261 aa21.12■□□□□ 0.97
TSSC4-210ENST00000496468 GJB2P29033 226 aa21.12■□□□□ 0.97
TSSC4-210ENST00000496468 PSMC4P43686 418 aa21.12■□□□□ 0.97
TSSC4-210ENST00000496468 TYW1BQ6NUM6 668 aa21.12■□□□□ 0.97
TSSC4-210ENST00000496468 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.12■□□□□ 0.97
TSSC4-210ENST00000496468 MCF2L2Q86YR7 1114 aa21.12■□□□□ 0.97
TSSC4-210ENST00000496468 ARHGAP39Q9C0H5 1083 aa21.12■□□□□ 0.97
TSSC4-210ENST00000496468 HSPA8P11142 646 aaKnown RBP21.11■□□□□ 0.97
TSSC4-210ENST00000496468 FCER1AP12319 257 aa21.11■□□□□ 0.97
TSSC4-210ENST00000496468 FOSBP53539 338 aa21.11■□□□□ 0.97
TSSC4-210ENST00000496468 KCTD2Q14681 263 aa21.11■□□□□ 0.97
TSSC4-210ENST00000496468 NSMFQ6X4W1 530 aa21.11■□□□□ 0.97
TSSC4-210ENST00000496468 FAM177A1Q8N128 213 aaPredicted RBP21.11■□□□□ 0.97
TSSC4-210ENST00000496468 ANKRD35Q8N283 1001 aa21.11■□□□□ 0.97
TSSC4-210ENST00000496468 A1CFQ9NQ94 594 aaKnown RBP21.11■□□□□ 0.97
TSSC4-210ENST00000496468 SH3GLB2Q9NR46 395 aa21.11■□□□□ 0.97
TSSC4-210ENST00000496468 FOXD4L1Q9NU39 408 aa21.11■□□□□ 0.97
TSSC4-210ENST00000496468 ESYT2A0FGR8 921 aa21.1■□□□□ 0.97
TSSC4-210ENST00000496468 OPLAHO14841 1288 aa21.1■□□□□ 0.97
TSSC4-210ENST00000496468 CTCFP49711 727 aaPredicted RBP21.1■□□□□ 0.97
TSSC4-210ENST00000496468 ADCY7P51828 1080 aa21.1■□□□□ 0.97
TSSC4-210ENST00000496468 TRIM29Q14134 588 aa21.1■□□□□ 0.97
TSSC4-210ENST00000496468 GRB14Q14449 540 aa21.1■□□□□ 0.97
TSSC4-210ENST00000496468 SLC30A10Q6XR72 485 aa21.1■□□□□ 0.97
TSSC4-210ENST00000496468 ABRAQ8N0Z2 381 aa21.1■□□□□ 0.97
TSSC4-210ENST00000496468 SOCS4Q8WXH5 440 aa21.1■□□□□ 0.97
TSSC4-210ENST00000496468 CUL5Q93034 780 aa21.1■□□□□ 0.97
TSSC4-210ENST00000496468 TRIM47Q96LD4 638 aa21.1■□□□□ 0.97
TSSC4-210ENST00000496468 CFBP00751 764 aa21.09■□□□□ 0.97
TSSC4-210ENST00000496468 CTGFP29279 349 aa21.09■□□□□ 0.97
TSSC4-210ENST00000496468 RNF207Q6ZRF8 634 aa21.09■□□□□ 0.97
TSSC4-210ENST00000496468 C8orf76Q96K31 380 aa21.09■□□□□ 0.97
TSSC4-210ENST00000496468 LCTP09848 1927 aa21.09■□□□□ 0.97
TSSC4-210ENST00000496468 SLC15A5A6NIM6 579 aa21.08■□□□□ 0.97
TSSC4-210ENST00000496468 STRNO43815 780 aa21.08■□□□□ 0.97
TSSC4-210ENST00000496468 PTPREP23469 700 aa21.08■□□□□ 0.97
TSSC4-210ENST00000496468 ADORA2AP29274 412 aa21.08■□□□□ 0.97
TSSC4-210ENST00000496468 NLRP5P59047 1200 aa21.08■□□□□ 0.97
TSSC4-210ENST00000496468 ARHGEF6Q15052 776 aa21.08■□□□□ 0.97
TSSC4-210ENST00000496468 RGS22Q8NE09 1264 aa21.08■□□□□ 0.97
TSSC4-210ENST00000496468 SHISA4Q96DD7 197 aa21.08■□□□□ 0.97
TSSC4-210ENST00000496468 MAF1Q9H063 256 aa21.08■□□□□ 0.97
TSSC4-210ENST00000496468 GLT8D2Q9H1C3 349 aa21.08■□□□□ 0.97
TSSC4-210ENST00000496468 PSTPIP2Q9H939 334 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms