RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 MYCLP12524 364 aaPredicted RBP9.85□□□□□ -0.83
U2AF1-212ENST00000496462 QRICH1Q2TAL8 776 aa9.85□□□□□ -0.83
U2AF1-212ENST00000496462 CLEC10AQ8IUN9 316 aa9.85□□□□□ -0.83
U2AF1-212ENST00000496462 CNKSR2Q8WXI2 1034 aa9.85□□□□□ -0.83
U2AF1-212ENST00000496462 MAST2Q6P0Q8 1798 aa9.85□□□□□ -0.83
U2AF1-212ENST00000496462 STOX1Q6ZVD7 989 aa9.85□□□□□ -0.83
U2AF1-212ENST00000496462 ZSCAN16Q9H4T2 348 aaPredicted RBP9.85□□□□□ -0.83
U2AF1-212ENST00000496462 DNAJC18Q9H819 358 aa9.85□□□□□ -0.83
U2AF1-212ENST00000496462 RNF186Q9NXI6 227 aa9.85□□□□□ -0.83
U2AF1-212ENST00000496462 CFAP45Q9UL16 551 aa9.85□□□□□ -0.83
U2AF1-212ENST00000496462 TRIM17Q9Y577 477 aa9.85□□□□□ -0.83
U2AF1-212ENST00000496462 XRRA1Q6P2D8 792 aa9.84□□□□□ -0.83
U2AF1-212ENST00000496462 RIOX2Q8IUF8 465 aa9.84□□□□□ -0.83
U2AF1-212ENST00000496462 ADAMTSL1Q8N6G6 1762 aa9.84□□□□□ -0.83
U2AF1-212ENST00000496462 CCDC85CA6NKD9 419 aa9.84□□□□□ -0.83
U2AF1-212ENST00000496462 VWA5AO00534 786 aa9.84□□□□□ -0.83
U2AF1-212ENST00000496462 GJB2P29033 226 aa9.84□□□□□ -0.83
U2AF1-212ENST00000496462 ADD1P35611 737 aaKnown RBP9.84□□□□□ -0.83
U2AF1-212ENST00000496462 SEC23AQ15436 765 aa9.84□□□□□ -0.83
U2AF1-212ENST00000496462 FBXL16Q8N461 479 aa9.84□□□□□ -0.83
U2AF1-212ENST00000496462 GIMAP8Q8ND71 665 aaPredicted RBP9.84□□□□□ -0.83
U2AF1-212ENST00000496462 STK36Q9NRP7 1315 aa9.84□□□□□ -0.83
U2AF1-212ENST00000496462 PAPPA2Q9BXP8 1791 aa9.84□□□□□ -0.83
U2AF1-212ENST00000496462 FAM155AB1AL88 458 aaPredicted RBP9.84□□□□□ -0.83
U2AF1-212ENST00000496462 GPR25O00155 361 aa9.84□□□□□ -0.83
U2AF1-212ENST00000496462 NOP56O00567 594 aaKnown RBP9.84□□□□□ -0.83
U2AF1-212ENST00000496462 DGKZQ13574 1117 aa9.84□□□□□ -0.83
U2AF1-212ENST00000496462 STK38Q15208 465 aa9.84□□□□□ -0.83
U2AF1-212ENST00000496462 STXBP2Q15833 593 aa9.84□□□□□ -0.83
U2AF1-212ENST00000496462 SDF4Q9BRK5 362 aa9.84□□□□□ -0.83
U2AF1-212ENST00000496462 HOOK1Q9UJC3 728 aaKnown RBP9.84□□□□□ -0.83
U2AF1-212ENST00000496462 IGKV6D-41A0A0C4DH26 115 aa9.83□□□□□ -0.84
U2AF1-212ENST00000496462 PALM3A6NDB9 673 aaPredicted RBP9.83□□□□□ -0.84
U2AF1-212ENST00000496462 CYP2C8P10632 490 aa9.83□□□□□ -0.84
U2AF1-212ENST00000496462 BTNL9Q6UXG8 535 aa9.83□□□□□ -0.84
U2AF1-212ENST00000496462 LARP6Q9BRS8 491 aaKnown RBP9.83□□□□□ -0.84
U2AF1-212ENST00000496462 ZHX1Q9UKY1 873 aaPredicted RBP9.83□□□□□ -0.84
U2AF1-212ENST00000496462 ERCC3P19447 782 aa9.83□□□□□ -0.84
U2AF1-212ENST00000496462 BRAPQ7Z569 592 aa9.83□□□□□ -0.84
U2AF1-212ENST00000496462 BLIDQ8IZY5 108 aa9.83□□□□□ -0.84
U2AF1-212ENST00000496462 PRDM10Q9NQV6 1147 aa9.83□□□□□ -0.84
U2AF1-212ENST00000496462 IL17RBQ9NRM6 502 aa9.83□□□□□ -0.84
U2AF1-212ENST00000496462 CIZ1Q9ULV3 898 aaPredicted RBP9.83□□□□□ -0.84
U2AF1-212ENST00000496462 LOC102724159A0A0B4J2E5 919 aa9.83□□□□□ -0.84
U2AF1-212ENST00000496462 SEC24BO95487 1268 aa9.83□□□□□ -0.84
U2AF1-212ENST00000496462 PWP2Q15269 919 aaKnown RBP9.83□□□□□ -0.84
U2AF1-212ENST00000496462 NCOA5Q9HCD5 579 aaKnown RBP9.83□□□□□ -0.84
U2AF1-212ENST00000496462 CHMP5Q9NZZ3 219 aa9.83□□□□□ -0.84
U2AF1-212ENST00000496462 SLURP2P0DP57 97 aa9.82□□□□□ -0.84
U2AF1-212ENST00000496462 CYP2B6P20813 491 aa9.82□□□□□ -0.84
U2AF1-212ENST00000496462 ANTXR2P58335 489 aa9.82□□□□□ -0.84
U2AF1-212ENST00000496462 TROAPQ12815 778 aa9.82□□□□□ -0.84
U2AF1-212ENST00000496462 SLC38A10Q9HBR0 1119 aa9.82□□□□□ -0.84
U2AF1-212ENST00000496462 SPDYE16A6NNV3 312 aaPredicted RBP9.82□□□□□ -0.84
U2AF1-212ENST00000496462 STAM2O75886 525 aa9.82□□□□□ -0.84
U2AF1-212ENST00000496462 GCFC2P16383 781 aaKnown RBP9.82□□□□□ -0.84
U2AF1-212ENST00000496462 CAPN2P17655 700 aa9.82□□□□□ -0.84
U2AF1-212ENST00000496462 PFKFB3Q16875 520 aaPredicted RBP9.82□□□□□ -0.84
U2AF1-212ENST00000496462 PPP4R3AQ6IN85 833 aa9.82□□□□□ -0.84
U2AF1-212ENST00000496462 LBX2Q6XYB7 198 aa9.82□□□□□ -0.84
U2AF1-212ENST00000496462 PHKBQ93100 1093 aa9.82□□□□□ -0.84
U2AF1-212ENST00000496462 FBXO28Q9NVF7 368 aa9.82□□□□□ -0.84
U2AF1-212ENST00000496462 SAMM50Q9Y512 469 aa9.82□□□□□ -0.84
U2AF1-212ENST00000496462 JAKMIP3Q5VZ66 844 aa9.82□□□□□ -0.84
U2AF1-212ENST00000496462 TTBK2Q6IQ55 1244 aa9.82□□□□□ -0.84
U2AF1-212ENST00000496462 CTU1Q7Z7A3 348 aaKnown RBP9.82□□□□□ -0.84
U2AF1-212ENST00000496462 ABRAQ8N0Z2 381 aa9.82□□□□□ -0.84
U2AF1-212ENST00000496462 RMDN3Q96TC7 470 aa9.82□□□□□ -0.84
U2AF1-212ENST00000496462 MLXIPQ9HAP2 919 aa9.82□□□□□ -0.84
U2AF1-212ENST00000496462 MRVI1Q9Y6F6 885 aa9.82□□□□□ -0.84
U2AF1-212ENST00000496462 TRPM7Q96QT4 1865 aa9.82□□□□□ -0.84
U2AF1-212ENST00000496462 MSCO60682 206 aa9.82□□□□□ -0.84
U2AF1-212ENST00000496462 TTLL4Q14679 1199 aa9.82□□□□□ -0.84
U2AF1-212ENST00000496462 PYM1Q9BRP8 204 aaKnown RBP9.82□□□□□ -0.84
U2AF1-212ENST00000496462 AZI2Q9H6S1 392 aa9.82□□□□□ -0.84
U2AF1-212ENST00000496462 TPCN1Q9ULQ1 816 aa9.82□□□□□ -0.84
U2AF1-212ENST00000496462 A0A1W2PRG0 241 aa9.81□□□□□ -0.84
U2AF1-212ENST00000496462 HOXC6P09630 235 aa9.81□□□□□ -0.84
U2AF1-212ENST00000496462 KRT85P78386 507 aa9.81□□□□□ -0.84
U2AF1-212ENST00000496462 CRHR2Q13324 411 aa9.81□□□□□ -0.84
U2AF1-212ENST00000496462 SLC9C1Q4G0N8 1177 aa9.81□□□□□ -0.84
U2AF1-212ENST00000496462 RILPL1Q5EBL4 403 aa9.81□□□□□ -0.84
U2AF1-212ENST00000496462 SLAIN1Q8ND83 568 aa9.81□□□□□ -0.84
U2AF1-212ENST00000496462 IWS1Q96ST2 819 aa9.81□□□□□ -0.84
U2AF1-212ENST00000496462 IL25Q9H293 177 aa9.81□□□□□ -0.84
U2AF1-212ENST00000496462 JMJD4Q9H9V9 463 aa9.81□□□□□ -0.84
U2AF1-212ENST00000496462 BMP2KQ9NSY1 1161 aaPredicted RBP9.81□□□□□ -0.84
U2AF1-212ENST00000496462 PCDHA4Q9UN74 947 aa9.81□□□□□ -0.84
U2AF1-212ENST00000496462 TESPA1A2RU30 521 aaPredicted RBP9.81□□□□□ -0.84
U2AF1-212ENST00000496462 ME3Q16798 604 aa9.81□□□□□ -0.84
U2AF1-212ENST00000496462 TREML2Q5T2D2 321 aa9.81□□□□□ -0.84
U2AF1-212ENST00000496462 FAM43AQ8N2R8 423 aa9.81□□□□□ -0.84
U2AF1-212ENST00000496462 NKX2-3Q8TAU0 364 aa9.81□□□□□ -0.84
U2AF1-212ENST00000496462 MOV10L1Q9BXT6 1211 aaKnown RBP9.81□□□□□ -0.84
U2AF1-212ENST00000496462 RANBP17Q9H2T7 1088 aaKnown RBP9.81□□□□□ -0.84
U2AF1-212ENST00000496462 RIOX1Q9H6W3 641 aa9.81□□□□□ -0.84
U2AF1-212ENST00000496462 MORF4L1Q9UBU8 362 aa9.81□□□□□ -0.84
U2AF1-212ENST00000496462 PLEKHA8P1O95397 391 aa9.81□□□□□ -0.84
U2AF1-212ENST00000496462 MSL3Q8N5Y2 521 aaKnown RBP9.81□□□□□ -0.84
U2AF1-212ENST00000496462 DNERQ8NFT8 737 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms