RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 ABHD16BQ9H3Z7 469 aa16.81■□□□□ 0.28
VTI1A-209ENST00000496445 GPCPD1Q9NPB8 672 aa16.81■□□□□ 0.28
VTI1A-209ENST00000496445 PDLIM7Q9NR12 457 aa16.81■□□□□ 0.28
VTI1A-209ENST00000496445 CCPG1Q9ULG6 757 aa16.81■□□□□ 0.28
VTI1A-209ENST00000496445 DDX49Q9Y6V7 483 aaKnown RBP16.81■□□□□ 0.28
VTI1A-209ENST00000496445 DUSP11O75319 330 aaKnown RBP16.8■□□□□ 0.28
VTI1A-209ENST00000496445 ZNF543Q08ER8 600 aa16.8■□□□□ 0.28
VTI1A-209ENST00000496445 CCDC144BQ3MJ40 725 aa16.8■□□□□ 0.28
VTI1A-209ENST00000496445 LRIT3Q3SXY7 679 aa16.8■□□□□ 0.28
VTI1A-209ENST00000496445 TTC14Q96N46 770 aa16.8■□□□□ 0.28
VTI1A-209ENST00000496445 CYP39A1Q9NYL5 469 aa16.8■□□□□ 0.28
VTI1A-209ENST00000496445 MYH6P13533 1939 aa16.79■□□□□ 0.28
VTI1A-209ENST00000496445 KDM4AO75164 1064 aa16.79■□□□□ 0.28
VTI1A-209ENST00000496445 SH3RF1Q7Z6J0 888 aa16.79■□□□□ 0.28
VTI1A-209ENST00000496445 PURBQ96QR8 312 aaKnown RBP16.79■□□□□ 0.28
VTI1A-209ENST00000496445 TSEN34Q9BSV6 310 aaKnown RBP16.79■□□□□ 0.28
VTI1A-209ENST00000496445 UPF3AQ9H1J1 476 aaKnown RBP16.79■□□□□ 0.28
VTI1A-209ENST00000496445 PRDM5Q9NQX1 630 aaPredicted RBP16.79■□□□□ 0.28
VTI1A-209ENST00000496445 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.78■□□□□ 0.28
VTI1A-209ENST00000496445 TRIM43BA6NCK2 446 aa16.78■□□□□ 0.28
VTI1A-209ENST00000496445 B4E1Z4 1266 aa16.78■□□□□ 0.28
VTI1A-209ENST00000496445 NFIBO00712 420 aa16.78■□□□□ 0.28
VTI1A-209ENST00000496445 CTAGE5O15320 804 aa16.78■□□□□ 0.28
VTI1A-209ENST00000496445 CST5P28325 142 aaPredicted RBP16.78■□□□□ 0.28
VTI1A-209ENST00000496445 ACLYP53396 1101 aa16.78■□□□□ 0.28
VTI1A-209ENST00000496445 TRIM43Q96BQ3 446 aaPredicted RBP16.78■□□□□ 0.28
VTI1A-209ENST00000496445 RAD50Q92878 1312 aa16.77■□□□□ 0.28
VTI1A-209ENST00000496445 MOXD2PA6NHM9 499 aa16.77■□□□□ 0.28
VTI1A-209ENST00000496445 ASB14A6NK59 587 aa16.77■□□□□ 0.28
VTI1A-209ENST00000496445 NT5C2P49902 561 aa16.77■□□□□ 0.28
VTI1A-209ENST00000496445 GJA9P57773 515 aa16.77■□□□□ 0.28
VTI1A-209ENST00000496445 TLE2Q04725 743 aa16.77■□□□□ 0.28
VTI1A-209ENST00000496445 KCNA10Q16322 511 aa16.77■□□□□ 0.28
VTI1A-209ENST00000496445 IMMTQ16891 758 aaKnown RBP16.77■□□□□ 0.28
VTI1A-209ENST00000496445 NSMFQ6X4W1 530 aa16.77■□□□□ 0.28
VTI1A-209ENST00000496445 DGKHQ86XP1 1220 aa16.77■□□□□ 0.28
VTI1A-209ENST00000496445 CPVLQ9H3G5 476 aa16.77■□□□□ 0.28
VTI1A-209ENST00000496445 PRKAG2Q9UGJ0 569 aa16.77■□□□□ 0.28
VTI1A-209ENST00000496445 C6orf222P0C671 652 aaPredicted RBP16.76■□□□□ 0.27
VTI1A-209ENST00000496445 GOLGA8HP0CJ92 632 aa16.76■□□□□ 0.27
VTI1A-209ENST00000496445 PTGS1P23219 599 aa16.76■□□□□ 0.27
VTI1A-209ENST00000496445 ITGB8P26012 769 aa16.76■□□□□ 0.27
VTI1A-209ENST00000496445 SLC30A10Q6XR72 485 aa16.76■□□□□ 0.27
VTI1A-209ENST00000496445 FBXO16Q8IX29 292 aaPredicted RBP16.76■□□□□ 0.27
VTI1A-209ENST00000496445 ENAHQ8N8S7 591 aaPredicted RBP16.76■□□□□ 0.27
VTI1A-209ENST00000496445 PNMA1Q8ND90 353 aa16.76■□□□□ 0.27
VTI1A-209ENST00000496445 MORC4Q8TE76 937 aa16.76■□□□□ 0.27
VTI1A-209ENST00000496445 CLEC4DQ8WXI8 215 aa16.76■□□□□ 0.27
VTI1A-209ENST00000496445 ANKS1AQ92625 1134 aa16.76■□□□□ 0.27
VTI1A-209ENST00000496445 ZSCAN10Q96SZ4 725 aaPredicted RBP16.76■□□□□ 0.27
VTI1A-209ENST00000496445 LBHD1Q9BQE6 289 aaPredicted RBP16.76■□□□□ 0.27
VTI1A-209ENST00000496445 STARD7Q9NQZ5 370 aa16.76■□□□□ 0.27
VTI1A-209ENST00000496445 TNKSO95271 1327 aa16.75■□□□□ 0.27
VTI1A-209ENST00000496445 WDR19Q8NEZ3 1342 aa16.75■□□□□ 0.27
VTI1A-209ENST00000496445 PQBP1O60828 265 aaKnown RBP16.75■□□□□ 0.27
VTI1A-209ENST00000496445 ASGR1P07306 291 aa16.75■□□□□ 0.27
VTI1A-209ENST00000496445 CLTBP09497 229 aa16.75■□□□□ 0.27
VTI1A-209ENST00000496445 NKX3-2P78367 333 aa16.75■□□□□ 0.27
VTI1A-209ENST00000496445 BAATQ14032 418 aaPredicted RBP16.75■□□□□ 0.27
VTI1A-209ENST00000496445 GPATCH4Q5T3I0 446 aaKnown RBP16.75■□□□□ 0.27
VTI1A-209ENST00000496445 TAPT1Q6NXT6 567 aa16.75■□□□□ 0.27
VTI1A-209ENST00000496445 IQCA1Q86XH1 822 aa16.75■□□□□ 0.27
VTI1A-209ENST00000496445 BADQ92934 168 aa16.75■□□□□ 0.27
VTI1A-209ENST00000496445 ZSWIM5Q9P217 1185 aa16.75■□□□□ 0.27
VTI1A-209ENST00000496445 CTNNA3Q9UI47 895 aa16.75■□□□□ 0.27
VTI1A-209ENST00000496445 GNEQ9Y223 722 aaKnown RBP16.75■□□□□ 0.27
VTI1A-209ENST00000496445 EYSQ5T1H1 3165 aa16.75■□□□□ 0.27
VTI1A-209ENST00000496445 SMPD1P17405 629 aa16.74■□□□□ 0.27
VTI1A-209ENST00000496445 CHMLP26374 656 aa16.74■□□□□ 0.27
VTI1A-209ENST00000496445 ALDH5A1P51649 535 aaPredicted RBP16.74■□□□□ 0.27
VTI1A-209ENST00000496445 TNFAIP2Q03169 654 aa16.74■□□□□ 0.27
VTI1A-209ENST00000496445 TMEM63BQ5T3F8 832 aa16.74■□□□□ 0.27
VTI1A-209ENST00000496445 GPR153Q6NV75 609 aa16.74■□□□□ 0.27
VTI1A-209ENST00000496445 ANKRD33Q7Z3H0 272 aa16.74■□□□□ 0.27
VTI1A-209ENST00000496445 NUP133Q8WUM0 1156 aa16.74■□□□□ 0.27
VTI1A-209ENST00000496445 UBA5Q9GZZ9 404 aa16.74■□□□□ 0.27
VTI1A-209ENST00000496445 KAT14Q9H8E8 782 aa16.74■□□□□ 0.27
VTI1A-209ENST00000496445 PDGFCQ9NRA1 345 aa16.74■□□□□ 0.27
VTI1A-209ENST00000496445 PTPDC1A2A3K4 754 aa16.73■□□□□ 0.27
VTI1A-209ENST00000496445 KIAA0355O15063 1070 aa16.73■□□□□ 0.27
VTI1A-209ENST00000496445 BEX3Q00994 111 aa16.73■□□□□ 0.27
VTI1A-209ENST00000496445 PTH1RQ03431 593 aa16.73■□□□□ 0.27
VTI1A-209ENST00000496445 FAAP100Q0VG06 881 aa16.73■□□□□ 0.27
VTI1A-209ENST00000496445 CCDC178Q5BJE1 867 aa16.73■□□□□ 0.27
VTI1A-209ENST00000496445 Q7L0L9 218 aa16.73■□□□□ 0.27
VTI1A-209ENST00000496445 EEPD1Q7L9B9 569 aa16.73■□□□□ 0.27
VTI1A-209ENST00000496445 TLK2Q86UE8 772 aa16.73■□□□□ 0.27
VTI1A-209ENST00000496445 PCSK9Q8NBP7 692 aaKnown RBP16.73■□□□□ 0.27
VTI1A-209ENST00000496445 TOX2Q96NM4 488 aa16.73■□□□□ 0.27
VTI1A-209ENST00000496445 KRT23Q9C075 422 aa16.73■□□□□ 0.27
VTI1A-209ENST00000496445 SPC25Q9HBM1 224 aa16.73■□□□□ 0.27
VTI1A-209ENST00000496445 ELP1O95163 1332 aa16.72■□□□□ 0.27
VTI1A-209ENST00000496445 UNC80Q8N2C7 3258 aa16.72■□□□□ 0.27
VTI1A-209ENST00000496445 CDC37Q16543 378 aaPredicted RBP16.72■□□□□ 0.27
VTI1A-209ENST00000496445 GNASQ5JWF2 1037 aa16.72■□□□□ 0.27
VTI1A-209ENST00000496445 C9orf50Q5SZB4 431 aa16.72■□□□□ 0.27
VTI1A-209ENST00000496445 CYB5R4Q7L1T6 521 aa16.72■□□□□ 0.27
VTI1A-209ENST00000496445 GLT1D1Q96MS3 346 aa16.72■□□□□ 0.27
VTI1A-209ENST00000496445 CNNM2Q9H8M5 875 aa16.72■□□□□ 0.27
VTI1A-209ENST00000496445 VTA1Q9NP79 307 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms