RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 ZIM3Q96PE6 472 aa10.07□□□□□ -0.8
HPS4-217ENST00000496385 BOLA2Q9H3K6 86 aa10.07□□□□□ -0.8
HPS4-217ENST00000496385 NARFQ9UHQ1 456 aa10.07□□□□□ -0.8
HPS4-217ENST00000496385 A6NHS1 94 aa10.07□□□□□ -0.8
HPS4-217ENST00000496385 MMP10P09238 476 aa10.07□□□□□ -0.8
HPS4-217ENST00000496385 BLMHQ13867 455 aa10.07□□□□□ -0.8
HPS4-217ENST00000496385 TBC1D25Q3MII6 688 aa10.07□□□□□ -0.8
HPS4-217ENST00000496385 SLC9C2Q5TAH2 1124 aa10.07□□□□□ -0.8
HPS4-217ENST00000496385 TBC1D9BQ66K14 1250 aa10.07□□□□□ -0.8
HPS4-217ENST00000496385 KIF6Q6ZMV9 814 aa10.07□□□□□ -0.8
HPS4-217ENST00000496385 CNKSR1Q969H4 720 aa10.07□□□□□ -0.8
HPS4-217ENST00000496385 ALS2CR12Q96Q35 445 aa10.07□□□□□ -0.8
HPS4-217ENST00000496385 STIM2Q9P246 746 aa10.07□□□□□ -0.8
HPS4-217ENST00000496385 LIMA1Q9UHB6 759 aaKnown RBP10.07□□□□□ -0.8
HPS4-217ENST00000496385 FBXO3Q9UK99 471 aa10.07□□□□□ -0.8
HPS4-217ENST00000496385 ZBTB12Q9Y330 459 aaPredicted RBP10.07□□□□□ -0.8
HPS4-217ENST00000496385 CASZ1Q86V15 1759 aa10.07□□□□□ -0.8
HPS4-217ENST00000496385 ATP5J2-PTCD1G3V325 749 aa10.06□□□□□ -0.8
HPS4-217ENST00000496385 PPIP5K2O43314 1243 aa10.06□□□□□ -0.8
HPS4-217ENST00000496385 PPFIA2O75334 1257 aa10.06□□□□□ -0.8
HPS4-217ENST00000496385 SKAP2O75563 359 aaPredicted RBP10.06□□□□□ -0.8
HPS4-217ENST00000496385 ABL1P00519 1130 aa10.06□□□□□ -0.8
HPS4-217ENST00000496385 PAEPP09466 180 aa10.06□□□□□ -0.8
HPS4-217ENST00000496385 ARID4AP29374 1257 aaPredicted RBP10.06□□□□□ -0.8
HPS4-217ENST00000496385 MARCKSP29966 332 aaPredicted RBP10.06□□□□□ -0.8
HPS4-217ENST00000496385 PEX19P40855 299 aa10.06□□□□□ -0.8
HPS4-217ENST00000496385 MAGEA8P43361 318 aa10.06□□□□□ -0.8
HPS4-217ENST00000496385 ATP1A2P50993 1020 aa10.06□□□□□ -0.8
HPS4-217ENST00000496385 GUCY1A3Q02108 690 aa10.06□□□□□ -0.8
HPS4-217ENST00000496385 ITGB3BPQ13352 177 aaPredicted RBP10.06□□□□□ -0.8
HPS4-217ENST00000496385 TTC39AQ5SRH9 613 aa10.06□□□□□ -0.8
HPS4-217ENST00000496385 CCDC122Q5T0U0 273 aa10.06□□□□□ -0.8
HPS4-217ENST00000496385 GSPT2Q8IYD1 628 aaKnown RBP10.06□□□□□ -0.8
HPS4-217ENST00000496385 ZNF579Q8NAF0 562 aaKnown RBP10.06□□□□□ -0.8
HPS4-217ENST00000496385 FLAD1Q8NFF5 587 aa10.06□□□□□ -0.8
HPS4-217ENST00000496385 MAP3K14Q99558 947 aa10.06□□□□□ -0.8
HPS4-217ENST00000496385 SLF1Q9BQI6 1058 aa10.06□□□□□ -0.8
HPS4-217ENST00000496385 LRRC2Q9BYS8 371 aa10.06□□□□□ -0.8
HPS4-217ENST00000496385 SENP2Q9HC62 589 aa10.06□□□□□ -0.8
HPS4-217ENST00000496385 NCOA5Q9HCD5 579 aaKnown RBP10.06□□□□□ -0.8
HPS4-217ENST00000496385 RPS6KL1Q9Y6S9 549 aa10.06□□□□□ -0.8
HPS4-217ENST00000496385 MYH8P13535 1937 aa10.06□□□□□ -0.8
HPS4-217ENST00000496385 TRAPPC3O43617 180 aa10.06□□□□□ -0.8
HPS4-217ENST00000496385 ZMYND10O75800 440 aa10.06□□□□□ -0.8
HPS4-217ENST00000496385 ANP32DO95626 131 aa10.06□□□□□ -0.8
HPS4-217ENST00000496385 PAPOLAP51003 745 aaKnown RBP10.06□□□□□ -0.8
HPS4-217ENST00000496385 CCNG1P51959 295 aa10.06□□□□□ -0.8
HPS4-217ENST00000496385 LRIG3Q6UXM1 1119 aa10.06□□□□□ -0.8
HPS4-217ENST00000496385 EIF1ADQ8N9N8 165 aaKnown RBP10.06□□□□□ -0.8
HPS4-217ENST00000496385 KRI1Q8N9T8 703 aaKnown RBP10.06□□□□□ -0.8
HPS4-217ENST00000496385 TSEN2Q8NCE0 465 aaKnown RBP10.06□□□□□ -0.8
HPS4-217ENST00000496385 CCT6BQ92526 530 aa10.06□□□□□ -0.8
HPS4-217ENST00000496385 TSGA10Q9BZW7 698 aa10.06□□□□□ -0.8
HPS4-217ENST00000496385 MTFR1LQ9H019 292 aa10.06□□□□□ -0.8
HPS4-217ENST00000496385 HELLSQ9NRZ9 838 aa10.06□□□□□ -0.8
HPS4-217ENST00000496385 RGL1Q9NZL6 768 aa10.06□□□□□ -0.8
HPS4-217ENST00000496385 ALADP13716 330 aa10.05□□□□□ -0.8
HPS4-217ENST00000496385 IFT20Q8IY31 132 aa10.05□□□□□ -0.8
HPS4-217ENST00000496385 CCDC155Q8N6L0 562 aa10.05□□□□□ -0.8
HPS4-217ENST00000496385 RRP36Q96EU6 259 aaKnown RBP10.05□□□□□ -0.8
HPS4-217ENST00000496385 THOC1Q96FV9 657 aaKnown RBP10.05□□□□□ -0.8
HPS4-217ENST00000496385 SEC16BQ96JE7 1060 aa10.05□□□□□ -0.8
HPS4-217ENST00000496385 PURBQ96QR8 312 aaKnown RBP10.05□□□□□ -0.8
HPS4-217ENST00000496385 MED15Q96RN5 788 aa10.05□□□□□ -0.8
HPS4-217ENST00000496385 NUP58Q9BVL2 599 aa10.05□□□□□ -0.8
HPS4-217ENST00000496385 HDAC6Q9UBN7 1215 aa10.05□□□□□ -0.8
HPS4-217ENST00000496385 RNF14Q9UBS8 474 aa10.05□□□□□ -0.8
HPS4-217ENST00000496385 PCDHGC5Q9Y5F6 944 aa10.05□□□□□ -0.8
HPS4-217ENST00000496385 PI4KAP2A4QPH2 592 aa10.05□□□□□ -0.8
HPS4-217ENST00000496385 KIF28PB7ZC32 967 aa10.05□□□□□ -0.8
HPS4-217ENST00000496385 PDLIM1O00151 329 aa10.05□□□□□ -0.8
HPS4-217ENST00000496385 TCP1P17987 556 aaKnown RBP10.05□□□□□ -0.8
HPS4-217ENST00000496385 KRT9P35527 623 aa10.05□□□□□ -0.8
HPS4-217ENST00000496385 MYO1EQ12965 1108 aa10.05□□□□□ -0.8
HPS4-217ENST00000496385 ZNF268Q14587 947 aaPredicted RBP10.05□□□□□ -0.8
HPS4-217ENST00000496385 NFIXQ14938 502 aa10.05□□□□□ -0.8
HPS4-217ENST00000496385 TSR1Q2NL82 804 aaKnown RBP10.05□□□□□ -0.8
HPS4-217ENST00000496385 HSP90AA4PQ58FG1 418 aa10.05□□□□□ -0.8
HPS4-217ENST00000496385 GKAP1Q5VSY0 366 aaPredicted RBP10.05□□□□□ -0.8
HPS4-217ENST00000496385 MTHFD1LQ6UB35 978 aa10.05□□□□□ -0.8
HPS4-217ENST00000496385 RIC3Q7Z5B4 369 aa10.05□□□□□ -0.8
HPS4-217ENST00000496385 PI4KAP1Q8N8J0 262 aa10.05□□□□□ -0.8
HPS4-217ENST00000496385 HVCN1Q96D96 273 aa10.05□□□□□ -0.8
HPS4-217ENST00000496385 DTNBP1Q96EV8 351 aa10.05□□□□□ -0.8
HPS4-217ENST00000496385 NUP88Q99567 741 aaPredicted RBP10.05□□□□□ -0.8
HPS4-217ENST00000496385 REXO2Q9Y3B8 237 aaKnown RBP10.05□□□□□ -0.8
HPS4-217ENST00000496385 ZNF609O15014 1411 aa10.05□□□□□ -0.8
HPS4-217ENST00000496385 WDR19Q8NEZ3 1342 aa10.05□□□□□ -0.8
HPS4-217ENST00000496385 SYNRGQ9UMZ2 1314 aa10.05□□□□□ -0.8
HPS4-217ENST00000496385 A0A087WZG4 1122 aa10.04□□□□□ -0.8
HPS4-217ENST00000496385 GOLGA6L10A0A0M3HER8 536 aa10.04□□□□□ -0.8
HPS4-217ENST00000496385 ENO4A6NNW6 628 aa10.04□□□□□ -0.8
HPS4-217ENST00000496385 E7EWF7 191 aa10.04□□□□□ -0.8
HPS4-217ENST00000496385 ENC1O14682 589 aa10.04□□□□□ -0.8
HPS4-217ENST00000496385 SSBP05455 408 aaKnown RBP eCLIP10.04□□□□□ -0.8
HPS4-217ENST00000496385 IMPDH2P12268 514 aa10.04□□□□□ -0.8
HPS4-217ENST00000496385 CCND1P24385 295 aa10.04□□□□□ -0.8
HPS4-217ENST00000496385 CYLC1P35663 651 aaPredicted RBP10.04□□□□□ -0.8
HPS4-217ENST00000496385 SEC24CP53992 1094 aa10.04□□□□□ -0.8
HPS4-217ENST00000496385 PAK2Q13177 524 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms