RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 CERS5Q8N5B7 392 aa12.45□□□□□ -0.42
CMSS1-208ENST00000496116 GIMAP8Q8ND71 665 aaPredicted RBP12.45□□□□□ -0.42
CMSS1-208ENST00000496116 CPLX3Q8WVH0 158 aa12.45□□□□□ -0.42
CMSS1-208ENST00000496116 TEKT1Q969V4 418 aa12.45□□□□□ -0.42
CMSS1-208ENST00000496116 PLIN2Q99541 437 aa12.45□□□□□ -0.42
CMSS1-208ENST00000496116 MAPK8IP1Q9UQF2 711 aa12.45□□□□□ -0.42
CMSS1-208ENST00000496116 NRXN2Q9P2S2 1712 aa12.45□□□□□ -0.42
CMSS1-208ENST00000496116 KLRC4O43908 158 aa12.44□□□□□ -0.42
CMSS1-208ENST00000496116 COBLO75128 1261 aa12.44□□□□□ -0.42
CMSS1-208ENST00000496116 URI1O94763 535 aaPredicted RBP12.44□□□□□ -0.42
CMSS1-208ENST00000496116 GYPCP04921 128 aa12.44□□□□□ -0.42
CMSS1-208ENST00000496116 EEF1GP26641 437 aaKnown RBP12.44□□□□□ -0.42
CMSS1-208ENST00000496116 TECP42680 631 aa12.44□□□□□ -0.42
CMSS1-208ENST00000496116 GNG11P61952 73 aa12.44□□□□□ -0.42
CMSS1-208ENST00000496116 TMEM266Q2M3C6 531 aa12.44□□□□□ -0.42
CMSS1-208ENST00000496116 PROM2Q8N271 834 aa12.44□□□□□ -0.42
CMSS1-208ENST00000496116 NOC3LQ8WTT2 800 aaKnown RBP12.44□□□□□ -0.42
CMSS1-208ENST00000496116 RAB34Q9BZG1 259 aa12.44□□□□□ -0.42
CMSS1-208ENST00000496116 VPS16Q9H269 839 aa12.44□□□□□ -0.42
CMSS1-208ENST00000496116 DDX4Q9NQI0 724 aaKnown RBP12.44□□□□□ -0.42
CMSS1-208ENST00000496116 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.44□□□□□ -0.42
CMSS1-208ENST00000496116 V9GYY5 206 aaPredicted RBP12.44□□□□□ -0.42
CMSS1-208ENST00000496116 SOWAHDA6NJG2 315 aa12.44□□□□□ -0.42
CMSS1-208ENST00000496116 EIF6P56537 245 aaKnown RBP12.44□□□□□ -0.42
CMSS1-208ENST00000496116 GPATCH4Q5T3I0 446 aaKnown RBP12.44□□□□□ -0.42
CMSS1-208ENST00000496116 MNS1Q8NEH6 495 aa12.44□□□□□ -0.42
CMSS1-208ENST00000496116 FLAD1Q8NFF5 587 aa12.44□□□□□ -0.42
CMSS1-208ENST00000496116 MASTLQ96GX5 879 aa12.44□□□□□ -0.42
CMSS1-208ENST00000496116 DHTKD1Q96HY7 919 aaPredicted RBP12.44□□□□□ -0.42
CMSS1-208ENST00000496116 NUP88Q99567 741 aaPredicted RBP12.44□□□□□ -0.42
CMSS1-208ENST00000496116 THAP9Q9H5L6 903 aa12.44□□□□□ -0.42
CMSS1-208ENST00000496116 EXOC1Q9NV70 894 aa12.44□□□□□ -0.42
CMSS1-208ENST00000496116 TAB2Q9NYJ8 693 aa12.44□□□□□ -0.42
CMSS1-208ENST00000496116 MAGEC2Q9UBF1 373 aaPredicted RBP12.44□□□□□ -0.42
CMSS1-208ENST00000496116 PNMA6FA0A0J9YX94 578 aa12.43□□□□□ -0.42
CMSS1-208ENST00000496116 BICDL2A1A5D9 508 aa12.43□□□□□ -0.42
CMSS1-208ENST00000496116 SCNN1DP51172 638 aa12.43□□□□□ -0.42
CMSS1-208ENST00000496116 UBXN1Q04323 297 aa12.43□□□□□ -0.42
CMSS1-208ENST00000496116 ZNF543Q08ER8 600 aa12.43□□□□□ -0.42
CMSS1-208ENST00000496116 CALCRLQ16602 461 aa12.43□□□□□ -0.42
CMSS1-208ENST00000496116 DOK7Q18PE1 504 aa12.43□□□□□ -0.42
CMSS1-208ENST00000496116 TMTC1Q8IUR5 882 aa12.43□□□□□ -0.42
CMSS1-208ENST00000496116 TRIM47Q96LD4 638 aa12.43□□□□□ -0.42
CMSS1-208ENST00000496116 C7orf25Q9BPX7 421 aa12.43□□□□□ -0.42
CMSS1-208ENST00000496116 DESI2Q9BSY9 194 aa12.43□□□□□ -0.42
CMSS1-208ENST00000496116 TRIM9Q9C026 710 aa12.43□□□□□ -0.42
CMSS1-208ENST00000496116 PARP3Q9Y6F1 533 aa12.43□□□□□ -0.42
CMSS1-208ENST00000496116 MPHOSPH10O00566 681 aaKnown RBP12.43□□□□□ -0.42
CMSS1-208ENST00000496116 FXR2P51116 673 aaKnown RBP eCLIP12.43□□□□□ -0.42
CMSS1-208ENST00000496116 ASIC1P78348 528 aa12.43□□□□□ -0.42
CMSS1-208ENST00000496116 PDE4DQ08499 809 aa12.43□□□□□ -0.42
CMSS1-208ENST00000496116 CDC42EP5Q6NZY7 148 aa12.43□□□□□ -0.42
CMSS1-208ENST00000496116 PODNQ7Z5L7 613 aa12.43□□□□□ -0.42
CMSS1-208ENST00000496116 COA7Q96BR5 231 aa12.43□□□□□ -0.42
CMSS1-208ENST00000496116 CCDC17Q96LX7 622 aa12.43□□□□□ -0.42
CMSS1-208ENST00000496116 EHD4Q9H223 541 aa12.43□□□□□ -0.42
CMSS1-208ENST00000496116 GPCPD1Q9NPB8 672 aa12.43□□□□□ -0.42
CMSS1-208ENST00000496116 ABHD10Q9NUJ1 306 aa12.43□□□□□ -0.42
CMSS1-208ENST00000496116 TMEM260Q9NX78 707 aa12.43□□□□□ -0.42
CMSS1-208ENST00000496116 ADGRG1Q9Y653 693 aa12.43□□□□□ -0.42
CMSS1-208ENST00000496116 TRIM49BA6NDI0 452 aa12.42□□□□□ -0.42
CMSS1-208ENST00000496116 FECHP22830 423 aa12.42□□□□□ -0.42
CMSS1-208ENST00000496116 SHMT1P34896 483 aa12.42□□□□□ -0.42
CMSS1-208ENST00000496116 TXKP42681 527 aa12.42□□□□□ -0.42
CMSS1-208ENST00000496116 FXR1P51114 621 aaKnown RBP eCLIP12.42□□□□□ -0.42
CMSS1-208ENST00000496116 MTF1Q14872 753 aa12.42□□□□□ -0.42
CMSS1-208ENST00000496116 ERCC6LQ2NKX8 1250 aa12.42□□□□□ -0.42
CMSS1-208ENST00000496116 CNNM4Q6P4Q7 775 aa12.42□□□□□ -0.42
CMSS1-208ENST00000496116 CYP26C1Q6V0L0 522 aa12.42□□□□□ -0.42
CMSS1-208ENST00000496116 COL23A1Q86Y22 540 aaPredicted RBP12.42□□□□□ -0.42
CMSS1-208ENST00000496116 FAM114A1Q8IWE2 563 aa12.42□□□□□ -0.42
CMSS1-208ENST00000496116 ADGRF4Q8IZF3 695 aa12.42□□□□□ -0.42
CMSS1-208ENST00000496116 UBXN4Q92575 508 aa12.42□□□□□ -0.42
CMSS1-208ENST00000496116 CDK5RAP3Q96JB5 506 aa12.42□□□□□ -0.42
CMSS1-208ENST00000496116 RIC8AQ9NPQ8 531 aa12.42□□□□□ -0.42
CMSS1-208ENST00000496116 STK17AQ9UEE5 414 aa12.42□□□□□ -0.42
CMSS1-208ENST00000496116 EP400Q96L91 3159 aa12.42□□□□□ -0.42
CMSS1-208ENST00000496116 A0A1W2PQC6 194 aa12.41□□□□□ -0.42
CMSS1-208ENST00000496116 EFCAB8A8MWE9 144 aa12.41□□□□□ -0.42
CMSS1-208ENST00000496116 APOBEC3HQ6NTF7 200 aaKnown RBP12.41□□□□□ -0.42
CMSS1-208ENST00000496116 RAD9BQ6WBX8 426 aa12.41□□□□□ -0.42
CMSS1-208ENST00000496116 SV2BQ7L1I2 683 aa12.41□□□□□ -0.42
CMSS1-208ENST00000496116 CUL5Q93034 780 aa12.41□□□□□ -0.42
CMSS1-208ENST00000496116 MTMR9Q96QG7 549 aa12.41□□□□□ -0.42
CMSS1-208ENST00000496116 MXD3Q9BW11 206 aa12.41□□□□□ -0.42
CMSS1-208ENST00000496116 DHX36Q9H2U1 1008 aaKnown RBP12.41□□□□□ -0.42
CMSS1-208ENST00000496116 JMJD4Q9H9V9 463 aa12.41□□□□□ -0.42
CMSS1-208ENST00000496116 OGFRQ9NZT2 677 aa12.41□□□□□ -0.42
CMSS1-208ENST00000496116 LRWD1Q9UFC0 647 aa12.41□□□□□ -0.42
CMSS1-208ENST00000496116 MYH4Q9Y623 1939 aa12.41□□□□□ -0.42
CMSS1-208ENST00000496116 LGALS16A8MUM7 142 aa12.41□□□□□ -0.42
CMSS1-208ENST00000496116 PLSCR1O15162 318 aa12.41□□□□□ -0.42
CMSS1-208ENST00000496116 KIF5CO60282 957 aa12.41□□□□□ -0.42
CMSS1-208ENST00000496116 CCNE1P24864 410 aa12.41□□□□□ -0.42
CMSS1-208ENST00000496116 CRKP46108 304 aa12.41□□□□□ -0.42
CMSS1-208ENST00000496116 MRPL12P52815 198 aaKnown RBP12.41□□□□□ -0.42
CMSS1-208ENST00000496116 PMS1P54277 932 aaKnown RBP12.41□□□□□ -0.42
CMSS1-208ENST00000496116 ATP2B2Q01814 1243 aa12.41□□□□□ -0.42
CMSS1-208ENST00000496116 PDIA5Q14554 519 aa12.41□□□□□ -0.42
CMSS1-208ENST00000496116 CCDC96Q2M329 555 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms