RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, human

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-233	ENST00000496030	ANKLE1	Q8NAG6	615 aa		13.86	□□□□□ -0.19
APTX-233	ENST00000496030	FANCB	Q8NB91	859 aa		13.86	□□□□□ -0.19
APTX-233	ENST00000496030	NUP133	Q8WUM0	1156 aa		13.86	□□□□□ -0.19
APTX-233	ENST00000496030	MTMR8	Q96EF0	704 aa		13.86	□□□□□ -0.19
APTX-233	ENST00000496030	JMJD4	Q9H9V9	463 aa		13.86	□□□□□ -0.19
APTX-233	ENST00000496030	PDRG1	Q9NUG6	133 aa		13.86	□□□□□ -0.19
APTX-233	ENST00000496030	ISY1	Q9ULR0	285 aa	Known RBP	13.86	□□□□□ -0.19
APTX-233	ENST00000496030	PFAS	O15067	1338 aa		13.86	□□□□□ -0.19
APTX-233	ENST00000496030	ZBED4	O75132	1171 aa		13.85	□□□□□ -0.19
APTX-233	ENST00000496030	PDIA3	P30101	505 aa	Known RBP	13.85	□□□□□ -0.19
APTX-233	ENST00000496030	STAT3	P40763	770 aa		13.85	□□□□□ -0.19
APTX-233	ENST00000496030	RCAN1	P53805	252 aa		13.85	□□□□□ -0.19
APTX-233	ENST00000496030	FUT2	Q10981	343 aa		13.85	□□□□□ -0.19
APTX-233	ENST00000496030	IK	Q13123	557 aa	Predicted RBP	13.85	□□□□□ -0.19
APTX-233	ENST00000496030	RIOX2	Q8IUF8	465 aa		13.85	□□□□□ -0.19
APTX-233	ENST00000496030	AGBL1	Q96MI9	1066 aa		13.85	□□□□□ -0.19
APTX-233	ENST00000496030	LARP6	Q9BRS8	491 aa	Known RBP	13.85	□□□□□ -0.19
APTX-233	ENST00000496030	C11orf49	Q9H6J7	331 aa		13.85	□□□□□ -0.19
APTX-233	ENST00000496030	RIOX1	Q9H6W3	641 aa		13.85	□□□□□ -0.19
APTX-233	ENST00000496030	RAVER2	Q9HCJ3	691 aa	Known RBP	13.85	□□□□□ -0.19
APTX-233	ENST00000496030	GJD2	Q9UKL4	321 aa		13.85	□□□□□ -0.19
APTX-233	ENST00000496030	PLXNB2	O15031	1838 aa		13.85	□□□□□ -0.19
APTX-233	ENST00000496030	ZBTB43	O43298	467 aa		13.84	□□□□□ -0.19
APTX-233	ENST00000496030	PLEKHA8P1	O95397	391 aa		13.84	□□□□□ -0.19
APTX-233	ENST00000496030	CALM1	P0DP23	149 aa		13.84	□□□□□ -0.19
APTX-233	ENST00000496030	CALM2	P0DP24	149 aa		13.84	□□□□□ -0.19
APTX-233	ENST00000496030	CALM3	P0DP25	149 aa		13.84	□□□□□ -0.19
APTX-233	ENST00000496030	CDC27	P30260	824 aa		13.84	□□□□□ -0.19
APTX-233	ENST00000496030	NEK4	P51957	841 aa		13.84	□□□□□ -0.19
APTX-233	ENST00000496030	OAZ1	P54368	228 aa		13.84	□□□□□ -0.19
APTX-233	ENST00000496030	AK2	P54819	239 aa		13.84	□□□□□ -0.19
APTX-233	ENST00000496030	MDM2	Q00987	491 aa	Predicted RBP	13.84	□□□□□ -0.19
APTX-233	ENST00000496030	FAM109B	Q6ICB4	259 aa	Predicted RBP	13.84	□□□□□ -0.19
APTX-233	ENST00000496030	MICU3	Q86XE3	530 aa		13.84	□□□□□ -0.19
APTX-233	ENST00000496030	CCDC144CP	Q8IYA2	1237 aa		13.84	□□□□□ -0.19
APTX-233	ENST00000496030	CPXCR1	Q8N123	301 aa		13.84	□□□□□ -0.19
APTX-233	ENST00000496030	SRBD1	Q8N5C6	995 aa	Known RBP	13.84	□□□□□ -0.19
APTX-233	ENST00000496030	SHCBP1	Q8NEM2	672 aa		13.84	□□□□□ -0.19
APTX-233	ENST00000496030	TEX13B	Q9BXU2	312 aa		13.84	□□□□□ -0.19
APTX-233	ENST00000496030	NID2	Q14112	1375 aa		13.83	□□□□□ -0.19
APTX-233	ENST00000496030	PPP1R11	O60927	126 aa	Predicted RBP	13.83	□□□□□ -0.2
APTX-233	ENST00000496030	TAL1	P17542	331 aa	Predicted RBP	13.83	□□□□□ -0.2
APTX-233	ENST00000496030	ERCC3	P19447	782 aa		13.83	□□□□□ -0.2
APTX-233	ENST00000496030	SMARCA1	P28370	1054 aa		13.83	□□□□□ -0.2
APTX-233	ENST00000496030	MAPK4	P31152	587 aa		13.83	□□□□□ -0.2
APTX-233	ENST00000496030	KIF5B	P33176	963 aa		13.83	□□□□□ -0.2
APTX-233	ENST00000496030	CCNA1	P78396	465 aa		13.83	□□□□□ -0.2
APTX-233	ENST00000496030	FGD1	P98174	961 aa		13.83	□□□□□ -0.2
APTX-233	ENST00000496030	PLS1	Q14651	629 aa		13.83	□□□□□ -0.2
APTX-233	ENST00000496030	SNRNP48	Q6IEG0	339 aa	Known RBP	13.83	□□□□□ -0.2
APTX-233	ENST00000496030	CCDC174	Q6PII3	467 aa		13.83	□□□□□ -0.2
APTX-233	ENST00000496030	TMTC3	Q6ZXV5	915 aa		13.83	□□□□□ -0.2
APTX-233	ENST00000496030	GPR142	Q7Z601	462 aa		13.83	□□□□□ -0.2
APTX-233	ENST00000496030	CMTR1	Q8N1G2	835 aa	Known RBP	13.83	□□□□□ -0.2
APTX-233	ENST00000496030	CTCFL	Q8NI51	663 aa	Predicted RBP	13.83	□□□□□ -0.2
APTX-233	ENST00000496030	USP6NL	Q92738	828 aa		13.83	□□□□□ -0.2
APTX-233	ENST00000496030	SPZ1	Q9BXG8	430 aa		13.83	□□□□□ -0.2
APTX-233	ENST00000496030	VAT1L	Q9HCJ6	419 aa		13.83	□□□□□ -0.2
APTX-233	ENST00000496030	RAPGEFL1	Q9UHV5	662 aa		13.83	□□□□□ -0.2
APTX-233	ENST00000496030	TPCN1	Q9ULQ1	816 aa		13.83	□□□□□ -0.2
APTX-233	ENST00000496030	ZNFX1	Q9P2E3	1918 aa	Known RBP	13.83	□□□□□ -0.2
APTX-233	ENST00000496030	SLC25A27	O95847	323 aa		13.82	□□□□□ -0.2
APTX-233	ENST00000496030	HMGCR	P04035	888 aa		13.82	□□□□□ -0.2
APTX-233	ENST00000496030	ICAM1	P05362	532 aa		13.82	□□□□□ -0.2
APTX-233	ENST00000496030	ADD1	P35611	737 aa	Known RBP	13.82	□□□□□ -0.2
APTX-233	ENST00000496030	QRICH1	Q2TAL8	776 aa		13.82	□□□□□ -0.2
APTX-233	ENST00000496030	MORN1	Q5T089	497 aa		13.82	□□□□□ -0.2
APTX-233	ENST00000496030	SYNE3	Q6ZMZ3	975 aa		13.82	□□□□□ -0.2
APTX-233	ENST00000496030	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.82	□□□□□ -0.2
APTX-233	ENST00000496030	COA7	Q96BR5	231 aa		13.82	□□□□□ -0.2
APTX-233	ENST00000496030	ZNF274	Q96GC6	653 aa	Predicted RBP	13.82	□□□□□ -0.2
APTX-233	ENST00000496030	PIGS	Q96S52	555 aa		13.82	□□□□□ -0.2
APTX-233	ENST00000496030	LZTS2	Q9BRK4	669 aa		13.82	□□□□□ -0.2
APTX-233	ENST00000496030	MROH8	Q9H579	483 aa		13.82	□□□□□ -0.2
APTX-233	ENST00000496030	UPF2	Q9HAU5	1272 aa	Known RBP	13.82	□□□□□ -0.2
APTX-233	ENST00000496030	OGDHL	Q9ULD0	1010 aa		13.82	□□□□□ -0.2
APTX-233	ENST00000496030	GOLGA8A	A7E2F4	631 aa		13.81	□□□□□ -0.2
APTX-233	ENST00000496030	GOLGA8B	A8MQT2	603 aa		13.81	□□□□□ -0.2
APTX-233	ENST00000496030	COL9A1	P20849	921 aa		13.81	□□□□□ -0.2
APTX-233	ENST00000496030	PTPRE	P23469	700 aa		13.81	□□□□□ -0.2
APTX-233	ENST00000496030	GNAQ	P50148	359 aa		13.81	□□□□□ -0.2
APTX-233	ENST00000496030	NTRK3	Q16288	839 aa		13.81	□□□□□ -0.2
APTX-233	ENST00000496030	CDC37	Q16543	378 aa	Predicted RBP	13.81	□□□□□ -0.2
APTX-233	ENST00000496030	RTN1	Q16799	776 aa		13.81	□□□□□ -0.2
APTX-233	ENST00000496030	PLEKHH3	Q7Z736	793 aa		13.81	□□□□□ -0.2
APTX-233	ENST00000496030	NCAPG2	Q86XI2	1143 aa		13.81	□□□□□ -0.2
APTX-233	ENST00000496030	MYH6	P13533	1939 aa		13.81	□□□□□ -0.2
APTX-233	ENST00000496030	ZBTB5	O15062	677 aa		13.8	□□□□□ -0.2
APTX-233	ENST00000496030	LARGE1	O95461	756 aa		13.8	□□□□□ -0.2
APTX-233	ENST00000496030	COL6A1	P12109	1028 aa		13.8	□□□□□ -0.2
APTX-233	ENST00000496030	METAP2	P50579	478 aa	Known RBP eCLIP	13.8	□□□□□ -0.2
APTX-233	ENST00000496030	GRB14	Q14449	540 aa		13.8	□□□□□ -0.2
APTX-233	ENST00000496030	PPP2R5B	Q15173	497 aa		13.8	□□□□□ -0.2
APTX-233	ENST00000496030	LRRC26	Q2I0M4	334 aa		13.8	□□□□□ -0.2
APTX-233	ENST00000496030	MUM1L1	Q5H9M0	696 aa		13.8	□□□□□ -0.2
APTX-233	ENST00000496030	MAFA	Q8NHW3	353 aa	Predicted RBP	13.8	□□□□□ -0.2
APTX-233	ENST00000496030	CLEC4D	Q8WXI8	215 aa		13.8	□□□□□ -0.2
APTX-233	ENST00000496030	CDX2	Q99626	313 aa	Predicted RBP	13.8	□□□□□ -0.2
APTX-233	ENST00000496030	NCOA5	Q9HCD5	579 aa	Known RBP	13.8	□□□□□ -0.2
APTX-233	ENST00000496030	HMX1	Q9NP08	348 aa	Predicted RBP	13.8	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms