RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 CCDC144BQ3MJ40 725 aa28.38■■■□□ 2.13
HLA-C-209ENST00000495835 UBAC1Q9BSL1 405 aa28.38■■■□□ 2.13
HLA-C-209ENST00000495835 KATNBL1Q9H079 304 aa28.38■■■□□ 2.13
HLA-C-209ENST00000495835 SPC25Q9HBM1 224 aa28.38■■■□□ 2.13
HLA-C-209ENST00000495835 ADD3Q9UEY8 706 aaKnown RBP28.38■■■□□ 2.13
HLA-C-209ENST00000495835 TNKSO95271 1327 aa28.38■■■□□ 2.13
HLA-C-209ENST00000495835 CST5P28325 142 aaPredicted RBP28.37■■■□□ 2.13
HLA-C-209ENST00000495835 ASPRV1Q53RT3 343 aa28.37■■■□□ 2.13
HLA-C-209ENST00000495835 NSMFQ6X4W1 530 aa28.37■■■□□ 2.13
HLA-C-209ENST00000495835 KLHDC9Q8NEP7 349 aa28.37■■■□□ 2.13
HLA-C-209ENST00000495835 PRKAG2Q9UGJ0 569 aa28.37■■■□□ 2.13
HLA-C-209ENST00000495835 SYNRGQ9UMZ2 1314 aa28.37■■■□□ 2.13
HLA-C-209ENST00000495835 NKX3-2P78367 333 aa28.36■■■□□ 2.13
HLA-C-209ENST00000495835 MORC4Q8TE76 937 aa28.36■■■□□ 2.13
HLA-C-209ENST00000495835 GJA9P57773 515 aa28.35■■■□□ 2.13
HLA-C-209ENST00000495835 PCSK9Q8NBP7 692 aaKnown RBP28.35■■■□□ 2.13
HLA-C-209ENST00000495835 RGS22Q8NE09 1264 aa28.35■■■□□ 2.13
HLA-C-209ENST00000495835 NUP133Q8WUM0 1156 aa28.35■■■□□ 2.13
HLA-C-209ENST00000495835 UPF3AQ9H1J1 476 aaKnown RBP28.35■■■□□ 2.13
HLA-C-209ENST00000495835 ATP11BQ9Y2G3 1177 aa28.35■■■□□ 2.13
HLA-C-209ENST00000495835 CYP21A2P08686 494 aa28.34■■■□□ 2.13
HLA-C-209ENST00000495835 PTH1RQ03431 593 aa28.34■■■□□ 2.13
HLA-C-209ENST00000495835 IFIT1BQ5T764 474 aaKnown RBP28.34■■■□□ 2.13
HLA-C-209ENST00000495835 CCSAPQ6IQ19 270 aaPredicted RBP28.34■■■□□ 2.13
HLA-C-209ENST00000495835 MAP4K1Q92918 833 aa28.34■■■□□ 2.13
HLA-C-209ENST00000495835 FERMT2Q96AC1 680 aa28.34■■■□□ 2.13
HLA-C-209ENST00000495835 A0A1W2PQ45 241 aaPredicted RBP28.33■■■□□ 2.13
HLA-C-209ENST00000495835 A0A1W2PQY0 241 aa28.33■■■□□ 2.13
HLA-C-209ENST00000495835 GOLGA8HP0CJ92 632 aa28.33■■■□□ 2.13
HLA-C-209ENST00000495835 ACLYP53396 1101 aa28.33■■■□□ 2.13
HLA-C-209ENST00000495835 BAATQ14032 418 aaPredicted RBP28.33■■■□□ 2.13
HLA-C-209ENST00000495835 CENPQQ7L2Z9 268 aaPredicted RBP28.33■■■□□ 2.13
HLA-C-209ENST00000495835 CLEC4DQ8WXI8 215 aa28.33■■■□□ 2.13
HLA-C-209ENST00000495835 LCTP09848 1927 aa28.32■■■□□ 2.12
HLA-C-209ENST00000495835 NFIBO00712 420 aa28.32■■■□□ 2.12
HLA-C-209ENST00000495835 PARP1P09874 1014 aaKnown RBP28.32■■■□□ 2.12
HLA-C-209ENST00000495835 TNFAIP2Q03169 654 aa28.32■■■□□ 2.12
HLA-C-209ENST00000495835 SEC23AQ15436 765 aa28.32■■■□□ 2.12
HLA-C-209ENST00000495835 IQSEC1Q6DN90 963 aa28.32■■■□□ 2.12
HLA-C-209ENST00000495835 TDHQ8IZJ6 230 aa28.32■■■□□ 2.12
HLA-C-209ENST00000495835 LENG1Q96BZ8 264 aaPredicted RBP28.32■■■□□ 2.12
HLA-C-209ENST00000495835 LBHD1Q9BQE6 289 aaPredicted RBP28.32■■■□□ 2.12
HLA-C-209ENST00000495835 UBE2OQ9C0C9 1292 aaKnown RBP28.32■■■□□ 2.12
HLA-C-209ENST00000495835 VTA1Q9NP79 307 aa28.32■■■□□ 2.12
HLA-C-209ENST00000495835 ASTN1O14525 1302 aa28.32■■■□□ 2.12
HLA-C-209ENST00000495835 KCNA10Q16322 511 aa28.31■■■□□ 2.12
HLA-C-209ENST00000495835 TRIM60Q495X7 471 aa28.31■■■□□ 2.12
HLA-C-209ENST00000495835 RNF207Q6ZRF8 634 aa28.31■■■□□ 2.12
HLA-C-209ENST00000495835 DNERQ8NFT8 737 aa28.31■■■□□ 2.12
HLA-C-209ENST00000495835 MPHOSPH6Q99547 160 aaKnown RBP28.31■■■□□ 2.12
HLA-C-209ENST00000495835 UBA5Q9GZZ9 404 aa28.31■■■□□ 2.12
HLA-C-209ENST00000495835 Q9Y3F1 56 aa28.31■■■□□ 2.12
HLA-C-209ENST00000495835 ELP1O95163 1332 aa28.31■■■□□ 2.12
HLA-C-209ENST00000495835 LAMA3Q16787 3333 aa28.3■■■□□ 2.12
HLA-C-209ENST00000495835 PTPDC1A2A3K4 754 aa28.3■■■□□ 2.12
HLA-C-209ENST00000495835 ADCY6O43306 1168 aa28.3■■■□□ 2.12
HLA-C-209ENST00000495835 C6orf222P0C671 652 aaPredicted RBP28.3■■■□□ 2.12
HLA-C-209ENST00000495835 ADGRF4Q8IZF3 695 aa28.3■■■□□ 2.12
HLA-C-209ENST00000495835 NCOA7Q8NI08 942 aa28.3■■■□□ 2.12
HLA-C-209ENST00000495835 TOX2Q96NM4 488 aa28.3■■■□□ 2.12
HLA-C-209ENST00000495835 STARD7Q9NQZ5 370 aa28.3■■■□□ 2.12
HLA-C-209ENST00000495835 SZT2Q5T011 3432 aa28.3■■■□□ 2.12
HLA-C-209ENST00000495835 B4DLN1 442 aa28.29■■■□□ 2.12
HLA-C-209ENST00000495835 ALDH5A1P51649 535 aaPredicted RBP28.29■■■□□ 2.12
HLA-C-209ENST00000495835 MRPL12P52815 198 aaKnown RBP28.29■■■□□ 2.12
HLA-C-209ENST00000495835 LRIT3Q3SXY7 679 aa28.29■■■□□ 2.12
HLA-C-209ENST00000495835 CYB5R4Q7L1T6 521 aa28.29■■■□□ 2.12
HLA-C-209ENST00000495835 RALYLQ86SE5 291 aaKnown RBP28.29■■■□□ 2.12
HLA-C-209ENST00000495835 GLT1D1Q96MS3 346 aa28.29■■■□□ 2.12
HLA-C-209ENST00000495835 GNEQ9Y223 722 aaKnown RBP28.29■■■□□ 2.12
HLA-C-209ENST00000495835 LRRC37A2A6NM11 1700 aa28.29■■■□□ 2.12
HLA-C-209ENST00000495835 ABCB11O95342 1321 aa28.28■■■□□ 2.12
HLA-C-209ENST00000495835 ERICH2A1L162 156 aa28.28■■■□□ 2.12
HLA-C-209ENST00000495835 E7EWF7 191 aa28.28■■■□□ 2.12
HLA-C-209ENST00000495835 SART3Q15020 963 aaKnown RBP28.28■■■□□ 2.12
HLA-C-209ENST00000495835 CDC37Q16543 378 aaPredicted RBP28.28■■■□□ 2.12
HLA-C-209ENST00000495835 GNASQ5JWF2 1037 aa28.28■■■□□ 2.12
HLA-C-209ENST00000495835 TAPT1Q6NXT6 567 aa28.28■■■□□ 2.12
HLA-C-209ENST00000495835 KIAA1211Q6ZU35 1233 aa28.28■■■□□ 2.12
HLA-C-209ENST00000495835 ANKRD33Q7Z3H0 272 aa28.28■■■□□ 2.12
HLA-C-209ENST00000495835 ASGR1P07306 291 aa28.27■■■□□ 2.12
HLA-C-209ENST00000495835 RPS6P62753 249 aaKnown RBP28.27■■■□□ 2.12
HLA-C-209ENST00000495835 MDM2Q00987 491 aaPredicted RBP28.27■■■□□ 2.12
HLA-C-209ENST00000495835 TLE2Q04725 743 aa28.27■■■□□ 2.12
HLA-C-209ENST00000495835 GPR153Q6NV75 609 aa28.27■■■□□ 2.12
HLA-C-209ENST00000495835 PDLIM7Q9NR12 457 aa28.27■■■□□ 2.12
HLA-C-209ENST00000495835 MYH6P13533 1939 aa28.27■■■□□ 2.12
HLA-C-209ENST00000495835 MROH7Q68CQ1 1323 aa28.26■■■□□ 2.11
HLA-C-209ENST00000495835 MCF2L2Q86YR7 1114 aa28.26■■■□□ 2.11
HLA-C-209ENST00000495835 MTA3Q9BTC8 594 aa28.26■■■□□ 2.11
HLA-C-209ENST00000495835 JMJD4Q9H9V9 463 aa28.26■■■□□ 2.11
HLA-C-209ENST00000495835 LTBP2Q14767 1821 aa28.26■■■□□ 2.11
HLA-C-209ENST00000495835 C11orf97A0A1B0GVM6 126 aaPredicted RBP28.25■■■□□ 2.11
HLA-C-209ENST00000495835 MYADML2A6NDP7 307 aa28.25■■■□□ 2.11
HLA-C-209ENST00000495835 IFIT3O14879 490 aaKnown RBP28.25■■■□□ 2.11
HLA-C-209ENST00000495835 CTAGE5O15320 804 aa28.25■■■□□ 2.11
HLA-C-209ENST00000495835 CABYRO75952 493 aa28.25■■■□□ 2.11
HLA-C-209ENST00000495835 CALML3P27482 149 aa28.25■■■□□ 2.11
HLA-C-209ENST00000495835 BMP2KLQ5H9B9 411 aa28.25■■■□□ 2.11
HLA-C-209ENST00000495835 SLC30A10Q6XR72 485 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms